PSME_00032528-RA

Description : (at3g53740 : 137.0) Ribosomal protein L36e family protein; FUNCTIONS IN: structural constituent of ribosome; INVOLVED IN: translation; LOCATED IN: cytosolic ribosome, ribosome, cytosolic large ribosomal subunit, plasma membrane, membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Ribosomal protein L36e (InterPro:IPR000509); BEST Arabidopsis thaliana protein match is: Ribosomal protein L36e family protein (TAIR:AT2G37600.2); Has 756 Blast hits to 755 proteins in 262 species: Archae - 0; Bacteria - 0; Metazoa - 356; Fungi - 139; Plants - 140; Viruses - 0; Other Eukaryotes - 121 (source: NCBI BLink). & (p52866|rl36_dauca : 113.0) 60S ribosomal protein L36 - Daucus carota (Carrot) & (reliability: 274.0) & (original description: no original description)

Gene families : OG_42_0001685 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0001685_tree

Sequence : coding (download), protein (download)

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Pseudotsuga release: PSME_00032528-RA
Cluster	HCCA clusters: Cluster_117

Target	Alias	Description	ECC score	Gene Family Method
267958	No alias	Ribosomal protein L36e family protein	0.09	Orthogroups_2024-Update
439710	No alias	Ribosomal protein L36e family protein	0.08	Orthogroups_2024-Update
At2g37600	No alias	60S ribosomal protein L36-1...	0.07	Orthogroups_2024-Update
At3g53740	No alias	60S ribosomal protein L36...	0.06	Orthogroups_2024-Update
Bradi2g23260	No alias	Ribosomal protein L36e family protein	0.09	Orthogroups_2024-Update
Brara.C01889.1	No alias	component *(eL36) of large ribosomal-subunit (LSU) proteome	0.17	Orthogroups_2024-Update
Brara.D02287.1	No alias	component *(eL36) of large ribosomal-subunit (LSU) proteome	0.12	Orthogroups_2024-Update
Brara.E00749.1	No alias	component *(eL36) of large ribosomal-subunit (LSU) proteome	0.13	Orthogroups_2024-Update
Brara.G01608.1	No alias	component *(eL36) of large ribosomal-subunit (LSU) proteome	0.06	Orthogroups_2024-Update
Cre12.g484050	No alias	Ribosomal protein L36e family protein	0.19	Orthogroups_2024-Update
GRMZM2G009936	No alias	Ribosomal protein L36e family protein	0.06	Orthogroups_2024-Update
GRMZM5G850966	No alias	Ribosomal protein L36e family protein	0.03	Orthogroups_2024-Update
Glyma.10G233900	No alias	Ribosomal protein L36e family protein	0.08	Orthogroups_2024-Update
Glyma.19G047300	No alias	Ribosomal protein L36e family protein	0.04	Orthogroups_2024-Update
Glyma.20G160400	No alias	Ribosomal protein L36e family protein	0.03	Orthogroups_2024-Update
HORVU1Hr1G072270.1	No alias	component *(eL36) of large ribosomal-subunit (LSU) proteome	0.06	Orthogroups_2024-Update
HORVU3Hr1G086410.2	No alias	component *(eL36) of large ribosomal-subunit (LSU) proteome	0.04	Orthogroups_2024-Update
HORVU5Hr1G009610.2	No alias	component *(eL36) of large ribosomal-subunit (LSU) proteome	0.05	Orthogroups_2024-Update
Kfl00110_0150	kfl00110_0150_v1.1	(at2g37600 : 143.0) Ribosomal protein L36e family...	0.04	Orthogroups_2024-Update
LOC_Os05g38520	No alias	60S ribosomal protein L36-2, putative, expressed	0.06	Orthogroups_2024-Update
MA_10430792g0010	No alias	(at3g53740 : 140.0) Ribosomal protein L36e family...	0.05	Orthogroups_2024-Update
MA_24782g0010	No alias	(at3g53740 : 142.0) Ribosomal protein L36e family...	0.06	Orthogroups_2024-Update
Mp1g05460.1	No alias	component RPL36 of LSU proteome component	0.1	Orthogroups_2024-Update
Potri.004G057000	No alias	Ribosomal protein L36e family protein	0.02	Orthogroups_2024-Update
Potri.012G142600	No alias	Ribosomal protein L36e family protein	0.08	Orthogroups_2024-Update
Pp1s249_65V6	No alias	60s ribosomal protein l36-2	0.25	Orthogroups_2024-Update
Pp1s34_151V6	No alias	60s ribosomal protein l36-2	0.08	Orthogroups_2024-Update
Pp1s84_102V6	No alias	60s ribosomal protein l36-2	0.23	Orthogroups_2024-Update
Seita.3G217000.1	No alias	component *(eL36) of large ribosomal-subunit (LSU) proteome	0.04	Orthogroups_2024-Update
Sobic.003G351000.1	No alias	component *(eL36) of large ribosomal-subunit (LSU) proteome	0.04	Orthogroups_2024-Update
Sobic.009G163800.1	No alias	component *(eL36) of large ribosomal-subunit (LSU) proteome	0.14	Orthogroups_2024-Update
Solyc03g025520	No alias	60S ribosomal protein L36 (AHRD V3.3 *** K4BF25_SOLLC)	0.16	Orthogroups_2024-Update
Solyc06g036050	No alias	60S ribosomal protein L36 (AHRD V3.3 *** K4C4X4_SOLLC)	0.11	Orthogroups_2024-Update
Sopen01g038370	No alias	Ribosomal protein L36e	0.05	Orthogroups_2024-Update
Sopen03g004360	No alias	Ribosomal protein L36e	0.11	Orthogroups_2024-Update
Sopen06g011800	No alias	Ribosomal protein L36e	0.12	Orthogroups_2024-Update
evm.model.contig_3387.3	No alias	(at2g37600 : 125.0) Ribosomal protein L36e family...	0.05	Orthogroups_2024-Update
evm.model.tig00021493.69	No alias	(at2g37600 : 127.0) Ribosomal protein L36e family...	0.12	Orthogroups_2024-Update

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003735	structural constituent of ribosome	IEA	InterProScan predictions
MF	GO:0005198	structural molecule activity	None	Extended
CC	GO:0005575	cellular_component	None	Extended
CC	GO:0005622	intracellular	IEA	InterProScan predictions
CC	GO:0005840	ribosome	IEA	InterProScan predictions
BP	GO:0006412	translation	IEA	InterProScan predictions
BP	GO:0006518	peptide metabolic process	None	Extended
BP	GO:0006807	nitrogen compound metabolic process	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
BP	GO:0009058	biosynthetic process	None	Extended
BP	GO:0009059	macromolecule biosynthetic process	None	Extended
BP	GO:0009987	cellular process	None	Extended
BP	GO:0019538	protein metabolic process	None	Extended
CC	GO:0032991	protein-containing complex	None	Extended
BP	GO:0034641	cellular nitrogen compound metabolic process	None	Extended
BP	GO:0034645	cellular macromolecule biosynthetic process	None	Extended
BP	GO:0043043	peptide biosynthetic process	None	Extended
BP	GO:0043170	macromolecule metabolic process	None	Extended
CC	GO:0043226	organelle	None	Extended
CC	GO:0043228	non-membrane-bounded organelle	None	Extended
CC	GO:0043229	intracellular organelle	None	Extended
CC	GO:0043232	intracellular non-membrane-bounded organelle	None	Extended
BP	GO:0043603	cellular amide metabolic process	None	Extended
BP	GO:0043604	amide biosynthetic process	None	Extended
BP	GO:0044237	cellular metabolic process	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
BP	GO:0044249	cellular biosynthetic process	None	Extended
BP	GO:0044260	cellular macromolecule metabolic process	None	Extended
BP	GO:0044267	cellular protein metabolic process	None	Extended
BP	GO:0044271	cellular nitrogen compound biosynthetic process	None	Extended
CC	GO:0044424	intracellular part	None	Extended
CC	GO:0044444	cytoplasmic part	None	Extended
CC	GO:0044464	cell part	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended
BP	GO:1901564	organonitrogen compound metabolic process	None	Extended
BP	GO:1901566	organonitrogen compound biosynthetic process	None	Extended
BP	GO:1901576	organic substance biosynthetic process	None	Extended
CC	GO:1990904	ribonucleoprotein complex	None	Extended

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Type	GO Term	Name	Evidence	Source
MF	GO:0003755	peptidyl-prolyl cis-trans isomerase activity	IEP	Predicted GO
MF	GO:0004129	cytochrome-c oxidase activity	IEP	Predicted GO
CC	GO:0005740	mitochondrial envelope	IEP	Predicted GO
CC	GO:0005789	endoplasmic reticulum membrane	IEP	Predicted GO
BP	GO:0006357	regulation of transcription by RNA polymerase II	IEP	Predicted GO
MF	GO:0015002	heme-copper terminal oxidase activity	IEP	Predicted GO
CC	GO:0016592	mediator complex	IEP	Predicted GO
MF	GO:0016675	oxidoreductase activity, acting on a heme group of donors	IEP	Predicted GO
MF	GO:0016676	oxidoreductase activity, acting on a heme group of donors, oxygen as acceptor	IEP	Predicted GO
MF	GO:0016853	isomerase activity	IEP	Predicted GO
MF	GO:0016859	cis-trans isomerase activity	IEP	Predicted GO
CC	GO:0031967	organelle envelope	IEP	Predicted GO
CC	GO:0031975	envelope	IEP	Predicted GO
CC	GO:0044432	endoplasmic reticulum part	IEP	Predicted GO
MF	GO:0071949	FAD binding	IEP	Predicted GO

InterPro domains	Description	Start	Stop
IPR000509	Ribosomal_L36e	26	119

External Links

No external refs found!

PSME_00032528-RA

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation