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  5. PSME_00034049-RA

PSME_00034049-RA


Description : (p12810|hsp11_wheat : 129.0) 16.9 kDa class I heat shock protein (Low molecular weight heat shock protein) (Heat shock protein 17) (HSP 16.9) - Triticum aestivum (Wheat) & (at4g10250 : 127.0) Columbia endomembrane-localized small heat shock protein; ATHSP22.0; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: response to heat; LOCATED IN: endomembrane system; EXPRESSED IN: 8 plant structures; EXPRESSED DURING: M germinated pollen stage, 4 anthesis, C globular stage, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Heat shock protein Hsp20 (InterPro:IPR002068), HSP20-like chaperone (InterPro:IPR008978); BEST Arabidopsis thaliana protein match is: HSP20-like chaperones superfamily protein (TAIR:AT1G07400.1); Has 7552 Blast hits to 7552 proteins in 1747 species: Archae - 200; Bacteria - 4479; Metazoa - 74; Fungi - 263; Plants - 1560; Viruses - 4; Other Eukaryotes - 972 (source: NCBI BLink). & (reliability: 254.0) & (original description: no original description)


Gene families : OG_42_0000044 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000044_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Pseudotsuga release: PSME_00034049-RA
Cluster HCCA clusters: Cluster_12

Target Alias Description ECC score Gene Family Method Actions
At1g53540 No alias 17.6 kDa class I heat shock protein 3... 0.03 Orthogroups_2024-Update
Brara.C00497.1 No alias class-C-II small heat-shock-responsive protein 0.04 Orthogroups_2024-Update
Brara.C01075.1 No alias class-C-I small heat-shock-responsive protein 0.02 Orthogroups_2024-Update
Cre14.g617450 No alias HSP20-like chaperones superfamily protein 0.01 Orthogroups_2024-Update
GRMZM2G083810 No alias 17.6 kDa class II heat shock protein 0.02 Orthogroups_2024-Update
GRMZM2G098167 No alias HSP20-like chaperones superfamily protein 0.02 Orthogroups_2024-Update
Glyma.01G106800 No alias HSP20-like chaperones superfamily protein 0.02 Orthogroups_2024-Update
Glyma.07G200200 No alias HSP20-like chaperones superfamily protein 0.03 Orthogroups_2024-Update
Glyma.08G068800 No alias HSP20-like chaperones superfamily protein 0.02 Orthogroups_2024-Update
Glyma.13G176300 No alias HSP20-like chaperones superfamily protein 0.03 Orthogroups_2024-Update
Glyma.14G100000 No alias 17.6 kDa class II heat shock protein 0.03 Orthogroups_2024-Update
Glyma.16G206200 No alias HSP20-like chaperones superfamily protein 0.03 Orthogroups_2024-Update
Glyma.20G078400 No alias HSP20-like chaperones superfamily protein 0.03 Orthogroups_2024-Update
LOC_Os03g16030 No alias hsp20/alpha crystallin family protein, putative, expressed 0.02 Orthogroups_2024-Update
LOC_Os06g14240 No alias hsp20/alpha crystallin family protein, putative, expressed 0.02 Orthogroups_2024-Update
MA_103104g0010 No alias (original description: no original description) 0.03 Orthogroups_2024-Update
MA_52700g0010 No alias (p31673|hsp21_orysa : 159.0) 17.4 kDa class I heat shock... 0.03 Orthogroups_2024-Update
PSME_00010356-RA No alias (at3g51895 : 191.0) Encodes a sulfate transporter.;... 0.04 Orthogroups_2024-Update
PSME_00034048-RA No alias (p12810|hsp11_wheat : 142.0) 16.9 kDa class I heat shock... 0.03 Orthogroups_2024-Update
Pp1s372_62V6 No alias 18.5 kDa class I heat shock protein (HSP 18.5) [Glycine max] 0.05 Orthogroups_2024-Update
Pp1s8_244V6 No alias F12M12.200; 17.4 kDa class I heat shock protein... 0.05 Orthogroups_2024-Update
Seita.1G032700.1 No alias Unknown function 0.02 Orthogroups_2024-Update
Seita.9G458200.1 No alias class-C-I small heat-shock-responsive protein 0.05 Orthogroups_2024-Update
Sobic.001G425500.1 No alias class-C-I small heat-shock-responsive protein 0.03 Orthogroups_2024-Update
Sobic.003G081900.1 No alias class-C-I small heat-shock-responsive protein 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0000394 RNA splicing, via endonucleolytic cleavage and ligation IEP Predicted GO
MF GO:0004014 adenosylmethionine decarboxylase activity IEP Predicted GO
MF GO:0004601 peroxidase activity IEP Predicted GO
BP GO:0006388 tRNA splicing, via endonucleolytic cleavage and ligation IEP Predicted GO
BP GO:0006576 cellular biogenic amine metabolic process IEP Predicted GO
BP GO:0006595 polyamine metabolic process IEP Predicted GO
BP GO:0006596 polyamine biosynthetic process IEP Predicted GO
BP GO:0006597 spermine biosynthetic process IEP Predicted GO
BP GO:0006979 response to oxidative stress IEP Predicted GO
BP GO:0008033 tRNA processing IEP Predicted GO
BP GO:0008215 spermine metabolic process IEP Predicted GO
BP GO:0008216 spermidine metabolic process IEP Predicted GO
BP GO:0008295 spermidine biosynthetic process IEP Predicted GO
BP GO:0009309 amine biosynthetic process IEP Predicted GO
BP GO:0010629 negative regulation of gene expression IEP Predicted GO
MF GO:0016209 antioxidant activity IEP Predicted GO
BP GO:0016458 gene silencing IEP Predicted GO
MF GO:0016684 oxidoreductase activity, acting on peroxide as acceptor IEP Predicted GO
BP GO:0031047 gene silencing by RNA IEP Predicted GO
BP GO:0042401 cellular biogenic amine biosynthetic process IEP Predicted GO
BP GO:0044106 cellular amine metabolic process IEP Predicted GO
BP GO:0097164 ammonium ion metabolic process IEP Predicted GO
InterPro domains Description Start Stop
IPR002068 A-crystallin/Hsp20_dom 69 169
No external refs found!