Description : (at1g05260 : 254.0) Encodes a cold-inducible cationic peroxidase that is involved in the stress response. In response to low temperature, RCI3 transcripts accumulate in the aerial part and in roots of etiolated seedlings but only in roots of light-grown seedlings.; RARE COLD INDUCIBLE GENE 3 (RCI3); FUNCTIONS IN: peroxidase activity; INVOLVED IN: response to desiccation, response to cold, hyperosmotic salinity response; LOCATED IN: endoplasmic reticulum; EXPRESSED IN: 12 plant structures; EXPRESSED DURING: 4 anthesis, petal differentiation and expansion stage, E expanded cotyledon stage; CONTAINS InterPro DOMAIN/s: Haem peroxidase (InterPro:IPR010255), Plant peroxidase (InterPro:IPR000823), Peroxidases heam-ligand binding site (InterPro:IPR019793), Peroxidase, active site (InterPro:IPR019794), Haem peroxidase, plant/fungal/bacterial (InterPro:IPR002016); BEST Arabidopsis thaliana protein match is: Peroxidase superfamily protein (TAIR:AT3G21770.1); Has 4433 Blast hits to 4402 proteins in 259 species: Archae - 0; Bacteria - 4; Metazoa - 3; Fungi - 76; Plants - 4304; Viruses - 0; Other Eukaryotes - 46 (source: NCBI BLink). & (p37834|per1_orysa : 229.0) Peroxidase 1 precursor (EC 1.11.1.7) - Oryza sativa (Rice) & (reliability: 508.0) & (original description: no original description)
Gene families : OG_42_0000175 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000175_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
Type | Description | Actions |
---|---|---|
Neighborhood | Pseudotsuga release: PSME_00034245-RA | |
Cluster | HCCA clusters: Cluster_12 |
Target | Alias | Description | ECC score | Gene Family Method | Actions |
---|---|---|---|---|---|
232728 | No alias | Peroxidase superfamily protein | 0.02 | Orthogroups_2024-Update | |
A4A49_36207 | No alias | peroxidase 3 | 0.03 | Orthogroups_2024-Update | |
Bradi1g59550 | No alias | Peroxidase superfamily protein | 0.04 | Orthogroups_2024-Update | |
Bradi2g13190 | No alias | Peroxidase superfamily protein | 0.04 | Orthogroups_2024-Update | |
Bradi2g20850 | No alias | Peroxidase superfamily protein | 0.04 | Orthogroups_2024-Update | |
Mp4g05440.1 | No alias | Peroxidase 39 OS=Arabidopsis thaliana... | 0.02 | Orthogroups_2024-Update | |
Mp5g13710.1 | No alias | Peroxidase 30 OS=Arabidopsis thaliana... | 0.02 | Orthogroups_2024-Update | |
Mp7g14900.1 | No alias | Peroxidase 2 OS=Arabidopsis thaliana... | 0.02 | Orthogroups_2024-Update | |
PSME_00022703-RA | No alias | (at3g01190 : 350.0) Peroxidase superfamily protein;... | 0.04 | Orthogroups_2024-Update | |
Seita.3G347500.1 | No alias | Unknown function | 0.02 | Orthogroups_2024-Update | |
Sobic.004G049800.1 | No alias | Unknown function | 0.02 | Orthogroups_2024-Update | |
Sopen05g027240 | No alias | Peroxidase | 0.04 | Orthogroups_2024-Update |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0004601 | peroxidase activity | IEA | InterProScan predictions |
BP | GO:0006979 | response to oxidative stress | IEA | InterProScan predictions |
MF | GO:0020037 | heme binding | IEA | InterProScan predictions |
BP | GO:0055114 | oxidation-reduction process | IEA | InterProScan predictions |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
No Predicted GO terms available for this sequence |
InterPro domains | Description | Start | Stop |
---|---|---|---|
IPR002016 | Haem_peroxidase_pln/fun/bac | 57 | 274 |
No external refs found! |