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  5. PSME_00034536-RA

PSME_00034536-RA


Description : (at5g65670 : 239.0) auxin (indole-3-acetic acid) induced gene; indole-3-acetic acid inducible 9 (IAA9); CONTAINS InterPro DOMAIN/s: Aux/IAA-ARF-dimerisation (InterPro:IPR011525), AUX/IAA protein (InterPro:IPR003311); BEST Arabidopsis thaliana protein match is: indoleacetic acid-induced protein 8 (TAIR:AT2G22670.4); Has 2120 Blast hits to 2118 proteins in 85 species: Archae - 0; Bacteria - 0; Metazoa - 1; Fungi - 3; Plants - 2115; Viruses - 0; Other Eukaryotes - 1 (source: NCBI BLink). & (p0c132|iaa30_orysa : 230.0) Auxin-responsive protein IAA30 (Indoleacetic acid-induced protein 30) - Oryza sativa (Rice) & (reliability: 478.0) & (original description: no original description)


Gene families : OG_42_0000083 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000083_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Pseudotsuga release: PSME_00034536-RA
Cluster HCCA clusters: Cluster_86

Target Alias Description ECC score Gene Family Method Actions
A4A49_00042 No alias auxin-responsive protein iaa17 0.02 Orthogroups_2024-Update
A4A49_10855 No alias auxin-induced protein 22d 0.02 Orthogroups_2024-Update
At3g04730 No alias Auxin-responsive protein IAA16... 0.04 Orthogroups_2024-Update
At3g23030 No alias Auxin-responsive protein [Source:UniProtKB/TrEMBL;Acc:A0A1I9LQ54] 0.03 Orthogroups_2024-Update
At4g29080 No alias Auxin-responsive protein IAA27... 0.03 Orthogroups_2024-Update
At5g25890 No alias Auxin-responsive protein [Source:UniProtKB/TrEMBL;Acc:Q2VWA1] 0.03 Orthogroups_2024-Update
Bradi2g33417 No alias phytochrome-associated protein 1 0.03 Orthogroups_2024-Update
Bradi3g08667 No alias indole-3-acetic acid inducible 18 0.03 Orthogroups_2024-Update
Bradi4g02580 No alias AUX/IAA transcriptional regulator family protein 0.02 Orthogroups_2024-Update
Brara.E01960.1 No alias transcriptional repressor *(IAA/AUX) 0.03 Orthogroups_2024-Update
Brara.F00165.1 No alias transcriptional repressor *(IAA/AUX) 0.03 Orthogroups_2024-Update
Brara.I00524.1 No alias transcriptional repressor *(IAA/AUX) 0.03 Orthogroups_2024-Update
Brara.I05487.1 No alias transcriptional repressor *(IAA/AUX) 0.02 Orthogroups_2024-Update
GRMZM2G037368 No alias phytochrome-associated protein 2 0.02 Orthogroups_2024-Update
GRMZM2G074427 No alias phytochrome-associated protein 1 0.02 Orthogroups_2024-Update
GRMZM2G142768 No alias auxin-induced protein 13 0.02 Orthogroups_2024-Update
GRMZM2G159285 No alias indoleacetic acid-induced protein 16 0.02 Orthogroups_2024-Update
Glyma.09G193000 No alias phytochrome-associated protein 2 0.03 Orthogroups_2024-Update
Glyma.20G210400 No alias indole-3-acetic acid inducible 14 0.03 Orthogroups_2024-Update
LOC_Os05g09480 No alias OsIAA16 - Auxin-responsive Aux/IAA gene family member, expressed 0.03 Orthogroups_2024-Update
LOC_Os05g44810 No alias OsIAA18 - Auxin-responsive Aux/IAA gene family member, expressed 0.02 Orthogroups_2024-Update
MA_18664g0010 No alias (at3g16500 : 144.0) phytochrome-associated protein 1... 0.04 Orthogroups_2024-Update
Potri.005G218300 No alias indole-3-acetic acid inducible 14 0.03 Orthogroups_2024-Update
Potri.006G161200 No alias indole-3-acetic acid inducible 9 0.03 Orthogroups_2024-Update
Potri.008G161100 No alias AUX/IAA transcriptional regulator family protein 0.03 Orthogroups_2024-Update
Potri.013G041400 No alias indoleacetic acid-induced protein 16 0.03 Orthogroups_2024-Update
Seita.5G134600.1 No alias transcriptional repressor *(IAA/AUX) 0.03 Orthogroups_2024-Update
Sobic.009G065000.1 No alias transcriptional repressor *(IAA/AUX) 0.02 Orthogroups_2024-Update
Solyc04g076850 No alias entire 0.03 Orthogroups_2024-Update
Solyc06g053830 No alias auxin-regulated IAA7 0.02 Orthogroups_2024-Update
Sopen01g040960 No alias AUX/IAA family 0.03 Orthogroups_2024-Update
Sopen03g039270 No alias AUX/IAA family 0.02 Orthogroups_2024-Update
Sopen03g039290 No alias AUX/IAA family 0.02 Orthogroups_2024-Update
Sopen03g039380 No alias AUX/IAA family 0.03 Orthogroups_2024-Update
Sopen06g018950 No alias AUX/IAA family 0.04 Orthogroups_2024-Update
Sopen06g018970 No alias AUX/IAA family 0.03 Orthogroups_2024-Update
Sopen09g027640 No alias AUX/IAA family 0.04 Orthogroups_2024-Update
Sopen09g032200 No alias AUX/IAA family 0.03 Orthogroups_2024-Update
Sopen09g032210 No alias AUX/IAA family 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003700 DNA-binding transcription factor activity IEP Predicted GO
MF GO:0003951 NAD+ kinase activity IEP Predicted GO
MF GO:0004427 inorganic diphosphatase activity IEP Predicted GO
MF GO:0004484 mRNA guanylyltransferase activity IEP Predicted GO
MF GO:0004842 ubiquitin-protein transferase activity IEP Predicted GO
BP GO:0005984 disaccharide metabolic process IEP Predicted GO
BP GO:0005991 trehalose metabolic process IEP Predicted GO
BP GO:0005992 trehalose biosynthetic process IEP Predicted GO
BP GO:0006325 chromatin organization IEP Predicted GO
BP GO:0006355 regulation of transcription, DNA-templated IEP Predicted GO
BP GO:0006370 7-methylguanosine mRNA capping IEP Predicted GO
BP GO:0006473 protein acetylation IEP Predicted GO
BP GO:0006475 internal protein amino acid acetylation IEP Predicted GO
BP GO:0006479 protein methylation IEP Predicted GO
BP GO:0006739 NADP metabolic process IEP Predicted GO
BP GO:0006741 NADP biosynthetic process IEP Predicted GO
MF GO:0008170 N-methyltransferase activity IEP Predicted GO
MF GO:0008192 RNA guanylyltransferase activity IEP Predicted GO
BP GO:0008213 protein alkylation IEP Predicted GO
MF GO:0008276 protein methyltransferase activity IEP Predicted GO
MF GO:0008883 glutamyl-tRNA reductase activity IEP Predicted GO
BP GO:0009311 oligosaccharide metabolic process IEP Predicted GO
BP GO:0009312 oligosaccharide biosynthetic process IEP Predicted GO
BP GO:0009452 7-methylguanosine RNA capping IEP Predicted GO
MF GO:0009678 hydrogen-translocating pyrophosphatase activity IEP Predicted GO
BP GO:0009889 regulation of biosynthetic process IEP Predicted GO
BP GO:0010468 regulation of gene expression IEP Predicted GO
BP GO:0010556 regulation of macromolecule biosynthetic process IEP Predicted GO
MF GO:0016278 lysine N-methyltransferase activity IEP Predicted GO
MF GO:0016279 protein-lysine N-methyltransferase activity IEP Predicted GO
BP GO:0016569 covalent chromatin modification IEP Predicted GO
BP GO:0016570 histone modification IEP Predicted GO
BP GO:0016571 histone methylation IEP Predicted GO
BP GO:0016573 histone acetylation IEP Predicted GO
BP GO:0018022 peptidyl-lysine methylation IEP Predicted GO
MF GO:0018024 histone-lysine N-methyltransferase activity IEP Predicted GO
BP GO:0018130 heterocycle biosynthetic process IEP Predicted GO
BP GO:0018193 peptidyl-amino acid modification IEP Predicted GO
BP GO:0018205 peptidyl-lysine modification IEP Predicted GO
BP GO:0018393 internal peptidyl-lysine acetylation IEP Predicted GO
BP GO:0018394 peptidyl-lysine acetylation IEP Predicted GO
BP GO:0019219 regulation of nucleobase-containing compound metabolic process IEP Predicted GO
BP GO:0019222 regulation of metabolic process IEP Predicted GO
BP GO:0019725 cellular homeostasis IEP Predicted GO
MF GO:0019787 ubiquitin-like protein transferase activity IEP Predicted GO
BP GO:0031323 regulation of cellular metabolic process IEP Predicted GO
BP GO:0031326 regulation of cellular biosynthetic process IEP Predicted GO
BP GO:0033014 tetrapyrrole biosynthetic process IEP Predicted GO
BP GO:0034968 histone lysine methylation IEP Predicted GO
MF GO:0035091 phosphatidylinositol binding IEP Predicted GO
BP GO:0036260 RNA capping IEP Predicted GO
MF GO:0042054 histone methyltransferase activity IEP Predicted GO
BP GO:0042592 homeostatic process IEP Predicted GO
BP GO:0043414 macromolecule methylation IEP Predicted GO
BP GO:0043543 protein acylation IEP Predicted GO
MF GO:0043565 sequence-specific DNA binding IEP Predicted GO
BP GO:0045454 cell redox homeostasis IEP Predicted GO
BP GO:0046351 disaccharide biosynthetic process IEP Predicted GO
BP GO:0050789 regulation of biological process IEP Predicted GO
BP GO:0050794 regulation of cellular process IEP Predicted GO
BP GO:0051171 regulation of nitrogen compound metabolic process IEP Predicted GO
BP GO:0051252 regulation of RNA metabolic process IEP Predicted GO
BP GO:0060255 regulation of macromolecule metabolic process IEP Predicted GO
MF GO:0061630 ubiquitin protein ligase activity IEP Predicted GO
MF GO:0061659 ubiquitin-like protein ligase activity IEP Predicted GO
BP GO:0065007 biological regulation IEP Predicted GO
MF GO:0070568 guanylyltransferase activity IEP Predicted GO
BP GO:0080090 regulation of primary metabolic process IEP Predicted GO
MF GO:0140110 transcription regulator activity IEP Predicted GO
BP GO:1903506 regulation of nucleic acid-templated transcription IEP Predicted GO
BP GO:2000112 regulation of cellular macromolecule biosynthetic process IEP Predicted GO
BP GO:2001141 regulation of RNA biosynthetic process IEP Predicted GO
InterPro domains Description Start Stop
IPR033389 AUX/IAA_dom 67 440
No external refs found!