PSME_00035115-RA

Description : (at4g18700 : 483.0) Encodes CBL-interacting protein kinase 12 (CIPK12).; CBL-interacting protein kinase 12 (CIPK12); FUNCTIONS IN: protein serine/threonine kinase activity, protein kinase activity, kinase activity, ATP binding; INVOLVED IN: signal transduction, protein amino acid phosphorylation; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Serine/threonine-protein kinase domain (InterPro:IPR002290), NAF/FISL domain (InterPro:IPR018451), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271), NAF domain (InterPro:IPR004041), CBL-interacting protein kinase (InterPro:IPR020660), Protein kinase, catalytic domain (InterPro:IPR000719), Calcium/calmodulin-dependent protein kinase-like (InterPro:IPR020636); BEST Arabidopsis thaliana protein match is: CBL-interacting protein kinase 19 (TAIR:AT5G45810.1); Has 132740 Blast hits to 130588 proteins in 4556 species: Archae - 205; Bacteria - 15732; Metazoa - 48597; Fungi - 13262; Plants - 32355; Viruses - 523; Other Eukaryotes - 22066 (source: NCBI BLink). & (q6x4a2|cipk1_orysa : 407.0) CIPK-like protein 1 (EC 2.7.11.1) (OsCK1) - Oryza sativa (Rice) & (reliability: 966.0) & (original description: no original description)

Gene families : OG_42_0000034 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000034_tree

Sequence : coding (download), protein (download)

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Pseudotsuga release: PSME_00035115-RA
Cluster	HCCA clusters: Cluster_2

Target	Alias	Description	ECC score	Gene Family Method
A4A49_17418	No alias	cbl-interacting serinethreonine-protein kinase 6	0.02	Orthogroups_2024-Update
At5g58380	No alias	CBL-interacting serine/threonine-protein kinase 10...	0.02	Orthogroups_2024-Update
Bradi2g50440	No alias	CBL-interacting protein kinase 12	0.03	Orthogroups_2024-Update
Brara.B00012.1	No alias	SnRK3 SNF1-related protein kinase & CBL-dependent...	0.02	Orthogroups_2024-Update
Brara.D01811.1	No alias	SnRK3 SNF1-related protein kinase & CBL-dependent...	0.03	Orthogroups_2024-Update
Brara.F02713.1	No alias	SnRK3 SNF1-related protein kinase & CBL-dependent...	0.02	Orthogroups_2024-Update
Brara.K00511.1	No alias	SnRK3 SNF1-related protein kinase & CBL-dependent...	0.02	Orthogroups_2024-Update
Glyma.07G051000	No alias	CBL-interacting protein kinase 9	0.03	Orthogroups_2024-Update
Glyma.13G370000	No alias	CBL-interacting protein kinase 5	0.04	Orthogroups_2024-Update
Glyma.15G003400	No alias	CBL-interacting protein kinase 25	0.04	Orthogroups_2024-Update
Glyma.19G111300	No alias	SOS3-interacting protein 1	0.03	Orthogroups_2024-Update
HORVU2Hr1G060350.5	No alias	SnRK3 SNF1-related protein kinase & CBL-dependent...	0.05	Orthogroups_2024-Update
HORVU2Hr1G117610.1	No alias	EC_2.7 transferase transferring phosphorus-containing group	0.04	Orthogroups_2024-Update
HORVU5Hr1G065350.1	No alias	SnRK3 SNF1-related protein kinase & CBL-dependent...	0.02	Orthogroups_2024-Update
HORVU5Hr1G065370.1	No alias	SnRK3 SNF1-related protein kinase & CBL-dependent...	0.02	Orthogroups_2024-Update
LOC_Os01g60910	No alias	CAMK_KIN1/SNF1/Nim1_like.12 - CAMK includes...	0.03	Orthogroups_2024-Update
LOC_Os06g35160	No alias	CAMK_KIN1/SNF1/Nim1_like.26 - CAMK includes...	0.02	Orthogroups_2024-Update
LOC_Os08g34240	No alias	CAMK_KIN1/SNF1/Nim1_like.33 - CAMK includes...	0.03	Orthogroups_2024-Update
MA_31203g0010	No alias	(at1g30270 : 433.0) Arabidopsis thaliana CBL-interacting...	0.03	Orthogroups_2024-Update
Potri.001G222600	No alias	CBL-interacting protein kinase 3	0.02	Orthogroups_2024-Update
Potri.002G109000	No alias	CBL-interacting protein kinase 8	0.05	Orthogroups_2024-Update
Pp1s211_132V6	No alias	cbl-interacting serine threonine-protein	0.03	Orthogroups_2024-Update
Seita.3G181100.1	No alias	CBL-dependent protein kinase *(CIPK) & EC_2.7...	0.03	Orthogroups_2024-Update
Seita.5G325500.1	No alias	SnRK3 SNF1-related protein kinase & CBL-dependent...	0.03	Orthogroups_2024-Update
Seita.9G162500.1	No alias	CBL-dependent protein kinase *(CIPK) & EC_2.7...	0.04	Orthogroups_2024-Update
Sobic.002G417201.1	No alias	EC_2.7 transferase transferring phosphorus-containing group	0.04	Orthogroups_2024-Update
Sobic.002G417300.1	No alias	SnRK3 SNF1-related protein kinase & CBL-dependent...	0.02	Orthogroups_2024-Update
Sopen09g011120	No alias	Protein kinase domain	0.02	Orthogroups_2024-Update
Sopen12g005010	No alias	Protein kinase domain	0.02	Orthogroups_2024-Update

Type	GO Term	Name	Evidence	Source
MF	GO:0000166	nucleotide binding	None	Extended
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003824	catalytic activity	None	Extended
MF	GO:0004672	protein kinase activity	IEA	InterProScan predictions
MF	GO:0005488	binding	None	Extended
MF	GO:0005524	ATP binding	IEA	InterProScan predictions
BP	GO:0006464	cellular protein modification process	None	Extended
BP	GO:0006468	protein phosphorylation	IEA	InterProScan predictions
BP	GO:0006793	phosphorus metabolic process	None	Extended
BP	GO:0006796	phosphate-containing compound metabolic process	None	Extended
BP	GO:0006807	nitrogen compound metabolic process	None	Extended
BP	GO:0007165	signal transduction	IEA	InterProScan predictions
MF	GO:0008144	drug binding	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
BP	GO:0009987	cellular process	None	Extended
MF	GO:0016301	kinase activity	None	Extended
BP	GO:0016310	phosphorylation	None	Extended
MF	GO:0016740	transferase activity	None	Extended
MF	GO:0016772	transferase activity, transferring phosphorus-containing groups	None	Extended
MF	GO:0016773	phosphotransferase activity, alcohol group as acceptor	None	Extended
MF	GO:0017076	purine nucleotide binding	None	Extended
BP	GO:0019538	protein metabolic process	None	Extended
MF	GO:0030554	adenyl nucleotide binding	None	Extended
MF	GO:0032553	ribonucleotide binding	None	Extended
MF	GO:0032555	purine ribonucleotide binding	None	Extended
MF	GO:0032559	adenyl ribonucleotide binding	None	Extended
MF	GO:0035639	purine ribonucleoside triphosphate binding	None	Extended
MF	GO:0036094	small molecule binding	None	Extended
BP	GO:0036211	protein modification process	None	Extended
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043168	anion binding	None	Extended
BP	GO:0043170	macromolecule metabolic process	None	Extended
BP	GO:0043412	macromolecule modification	None	Extended
BP	GO:0044237	cellular metabolic process	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
BP	GO:0044260	cellular macromolecule metabolic process	None	Extended
BP	GO:0044267	cellular protein metabolic process	None	Extended
BP	GO:0050789	regulation of biological process	None	Extended
BP	GO:0050794	regulation of cellular process	None	Extended
BP	GO:0065007	biological regulation	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:0097367	carbohydrate derivative binding	None	Extended
MF	GO:0140096	catalytic activity, acting on a protein	None	Extended
MF	GO:1901265	nucleoside phosphate binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended
BP	GO:1901564	organonitrogen compound metabolic process	None	Extended

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Type	GO Term	Name	Evidence	Source
MF	GO:0000155	phosphorelay sensor kinase activity	IEP	Predicted GO
MF	GO:0003677	DNA binding	IEP	Predicted GO
MF	GO:0003690	double-stranded DNA binding	IEP	Predicted GO
MF	GO:0004673	protein histidine kinase activity	IEP	Predicted GO
CC	GO:0005789	endoplasmic reticulum membrane	IEP	Predicted GO
BP	GO:0006259	DNA metabolic process	IEP	Predicted GO
BP	GO:0006281	DNA repair	IEP	Predicted GO
BP	GO:0006298	mismatch repair	IEP	Predicted GO
BP	GO:0006355	regulation of transcription, DNA-templated	IEP	Predicted GO
BP	GO:0006497	protein lipidation	IEP	Predicted GO
BP	GO:0006505	GPI anchor metabolic process	IEP	Predicted GO
BP	GO:0006506	GPI anchor biosynthetic process	IEP	Predicted GO
BP	GO:0006643	membrane lipid metabolic process	IEP	Predicted GO
BP	GO:0006644	phospholipid metabolic process	IEP	Predicted GO
BP	GO:0006650	glycerophospholipid metabolic process	IEP	Predicted GO
BP	GO:0006661	phosphatidylinositol biosynthetic process	IEP	Predicted GO
BP	GO:0006664	glycolipid metabolic process	IEP	Predicted GO
BP	GO:0006974	cellular response to DNA damage stimulus	IEP	Predicted GO
MF	GO:0008536	Ran GTPase binding	IEP	Predicted GO
BP	GO:0008654	phospholipid biosynthetic process	IEP	Predicted GO
BP	GO:0009247	glycolipid biosynthetic process	IEP	Predicted GO
BP	GO:0009314	response to radiation	IEP	Predicted GO
BP	GO:0009416	response to light stimulus	IEP	Predicted GO
BP	GO:0009581	detection of external stimulus	IEP	Predicted GO
BP	GO:0009582	detection of abiotic stimulus	IEP	Predicted GO
BP	GO:0009583	detection of light stimulus	IEP	Predicted GO
BP	GO:0009584	detection of visible light	IEP	Predicted GO
BP	GO:0009605	response to external stimulus	IEP	Predicted GO
BP	GO:0009628	response to abiotic stimulus	IEP	Predicted GO
BP	GO:0009889	regulation of biosynthetic process	IEP	Predicted GO
BP	GO:0010468	regulation of gene expression	IEP	Predicted GO
BP	GO:0010556	regulation of macromolecule biosynthetic process	IEP	Predicted GO
MF	GO:0015075	ion transmembrane transporter activity	IEP	Predicted GO
MF	GO:0015318	inorganic molecular entity transmembrane transporter activity	IEP	Predicted GO
MF	GO:0016775	phosphotransferase activity, nitrogenous group as acceptor	IEP	Predicted GO
MF	GO:0017016	Ras GTPase binding	IEP	Predicted GO
BP	GO:0018298	protein-chromophore linkage	IEP	Predicted GO
BP	GO:0019219	regulation of nucleobase-containing compound metabolic process	IEP	Predicted GO
BP	GO:0019222	regulation of metabolic process	IEP	Predicted GO
MF	GO:0030983	mismatched DNA binding	IEP	Predicted GO
MF	GO:0031267	small GTPase binding	IEP	Predicted GO
BP	GO:0031323	regulation of cellular metabolic process	IEP	Predicted GO
BP	GO:0031326	regulation of cellular biosynthetic process	IEP	Predicted GO
BP	GO:0033554	cellular response to stress	IEP	Predicted GO
CC	GO:0044432	endoplasmic reticulum part	IEP	Predicted GO
BP	GO:0046467	membrane lipid biosynthetic process	IEP	Predicted GO
BP	GO:0046474	glycerophospholipid biosynthetic process	IEP	Predicted GO
BP	GO:0046488	phosphatidylinositol metabolic process	IEP	Predicted GO
BP	GO:0050896	response to stimulus	IEP	Predicted GO
MF	GO:0051020	GTPase binding	IEP	Predicted GO
BP	GO:0051171	regulation of nitrogen compound metabolic process	IEP	Predicted GO
BP	GO:0051252	regulation of RNA metabolic process	IEP	Predicted GO
BP	GO:0051606	detection of stimulus	IEP	Predicted GO
BP	GO:0051716	cellular response to stimulus	IEP	Predicted GO
BP	GO:0060255	regulation of macromolecule metabolic process	IEP	Predicted GO
BP	GO:0080090	regulation of primary metabolic process	IEP	Predicted GO
BP	GO:1903506	regulation of nucleic acid-templated transcription	IEP	Predicted GO
BP	GO:1903509	liposaccharide metabolic process	IEP	Predicted GO
BP	GO:2000112	regulation of cellular macromolecule biosynthetic process	IEP	Predicted GO
BP	GO:2001141	regulation of RNA biosynthetic process	IEP	Predicted GO

InterPro domains	Description	Start	Stop
IPR000719	Prot_kinase_dom	12	266
IPR004041	NAF_dom	310	368

External Links

No external refs found!

PSME_00035115-RA

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation