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  5. PSME_00035584-RA

PSME_00035584-RA


Description : (at1g69550 : 191.0) disease resistance protein (TIR-NBS-LRR class); FUNCTIONS IN: transmembrane receptor activity, nucleoside-triphosphatase activity, nucleotide binding, ATP binding; INVOLVED IN: signal transduction, defense response, apoptosis, innate immune response; LOCATED IN: intrinsic to membrane, endomembrane system; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: ATPase, AAA+ type, core (InterPro:IPR003593), NB-ARC (InterPro:IPR002182), Leucine-rich repeat (InterPro:IPR001611), Disease resistance protein (InterPro:IPR000767), Toll-Interleukin receptor (InterPro:IPR000157); BEST Arabidopsis thaliana protein match is: Disease resistance protein (TIR-NBS-LRR class) (TAIR:AT5G11250.1); Has 8455 Blast hits to 8197 proteins in 261 species: Archae - 0; Bacteria - 113; Metazoa - 3; Fungi - 4; Plants - 8303; Viruses - 0; Other Eukaryotes - 32 (source: NCBI BLink). & (reliability: 382.0) & (original description: no original description)


Gene families : OG_42_0000607 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000607_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Pseudotsuga release: PSME_00035584-RA
Cluster HCCA clusters: Cluster_40

Target Alias Description ECC score Gene Family Method Actions
MA_10430204g0020 No alias (at1g69550 : 133.0) disease resistance protein... 0.03 Orthogroups_2024-Update
MA_10433431g0020 No alias (at1g69550 : 123.0) disease resistance protein... 0.03 Orthogroups_2024-Update
MA_10435970g0030 No alias (at1g69550 : 82.8) disease resistance protein... 0.04 Orthogroups_2024-Update
MA_10435970g0040 No alias (at1g69550 : 147.0) disease resistance protein... 0.04 Orthogroups_2024-Update
MA_10437031g0020 No alias no hits & (original description: no original description) 0.03 Orthogroups_2024-Update
MA_9403319g0010 No alias no hits & (original description: no original description) 0.03 Orthogroups_2024-Update
PSME_00003863-RA No alias (at2g14080 : 112.0) Disease resistance protein... 0.05 Orthogroups_2024-Update
PSME_00005811-RA No alias (at1g69550 : 136.0) disease resistance protein... 0.05 Orthogroups_2024-Update
PSME_00012314-RA No alias (at1g69550 : 176.0) disease resistance protein... 0.06 Orthogroups_2024-Update
PSME_00012637-RA No alias (at1g69550 : 191.0) disease resistance protein... 0.04 Orthogroups_2024-Update
PSME_00014666-RA No alias (at1g69550 : 257.0) disease resistance protein... 0.06 Orthogroups_2024-Update
PSME_00019336-RA No alias (at1g69550 : 183.0) disease resistance protein... 0.04 Orthogroups_2024-Update
PSME_00022892-RA No alias (at1g69550 : 93.6) disease resistance protein... 0.06 Orthogroups_2024-Update
PSME_00023884-RA No alias (at1g69550 : 150.0) disease resistance protein... 0.04 Orthogroups_2024-Update
PSME_00025149-RA No alias (at1g69550 : 231.0) disease resistance protein... 0.06 Orthogroups_2024-Update
PSME_00028282-RA No alias (at1g69550 : 219.0) disease resistance protein... 0.04 Orthogroups_2024-Update
PSME_00029256-RA No alias (at1g69550 : 97.4) disease resistance protein... 0.03 Orthogroups_2024-Update
PSME_00031155-RA No alias (at1g69550 : 336.0) disease resistance protein... 0.04 Orthogroups_2024-Update
PSME_00032610-RA No alias (at1g69550 : 113.0) disease resistance protein... 0.03 Orthogroups_2024-Update
PSME_00035348-RA No alias (at1g69550 : 133.0) disease resistance protein... 0.05 Orthogroups_2024-Update
PSME_00038511-RA No alias (at1g69550 : 117.0) disease resistance protein... 0.05 Orthogroups_2024-Update
PSME_00039413-RA No alias (at1g69550 : 213.0) disease resistance protein... 0.04 Orthogroups_2024-Update
PSME_00043433-RA No alias (at1g69550 : 248.0) disease resistance protein... 0.05 Orthogroups_2024-Update
PSME_00044350-RA No alias (at1g69550 : 194.0) disease resistance protein... 0.04 Orthogroups_2024-Update
PSME_00050306-RA No alias (at1g69550 : 157.0) disease resistance protein... 0.05 Orthogroups_2024-Update
PSME_00052649-RA No alias (at1g69550 : 417.0) disease resistance protein... 0.05 Orthogroups_2024-Update
PSME_00052965-RA No alias (at1g69550 : 271.0) disease resistance protein... 0.03 Orthogroups_2024-Update
PSME_00053001-RA No alias (at1g69550 : 147.0) disease resistance protein... 0.05 Orthogroups_2024-Update
PSME_00055013-RA No alias (at1g69550 : 137.0) disease resistance protein... 0.03 Orthogroups_2024-Update
PSME_00055796-RA No alias (at1g69550 : 228.0) disease resistance protein... 0.04 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA InterProScan predictions
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Type GO Term Name Evidence Source
MF GO:0001871 pattern binding IEP Predicted GO
MF GO:0003824 catalytic activity IEP Predicted GO
MF GO:0004175 endopeptidase activity IEP Predicted GO
MF GO:0004252 serine-type endopeptidase activity IEP Predicted GO
MF GO:0004421 hydroxymethylglutaryl-CoA synthase activity IEP Predicted GO
MF GO:0004553 hydrolase activity, hydrolyzing O-glycosyl compounds IEP Predicted GO
MF GO:0004556 alpha-amylase activity IEP Predicted GO
MF GO:0004568 chitinase activity IEP Predicted GO
BP GO:0006022 aminoglycan metabolic process IEP Predicted GO
BP GO:0006026 aminoglycan catabolic process IEP Predicted GO
BP GO:0006030 chitin metabolic process IEP Predicted GO
BP GO:0006032 chitin catabolic process IEP Predicted GO
BP GO:0006040 amino sugar metabolic process IEP Predicted GO
BP GO:0006629 lipid metabolic process IEP Predicted GO
BP GO:0008152 metabolic process IEP Predicted GO
MF GO:0008236 serine-type peptidase activity IEP Predicted GO
MF GO:0016787 hydrolase activity IEP Predicted GO
MF GO:0016798 hydrolase activity, acting on glycosyl bonds IEP Predicted GO
MF GO:0016868 intramolecular transferase activity, phosphotransferases IEP Predicted GO
BP GO:0016998 cell wall macromolecule catabolic process IEP Predicted GO
MF GO:0017171 serine hydrolase activity IEP Predicted GO
MF GO:0030247 polysaccharide binding IEP Predicted GO
BP GO:0042737 drug catabolic process IEP Predicted GO
BP GO:0044036 cell wall macromolecule metabolic process IEP Predicted GO
BP GO:0046348 amino sugar catabolic process IEP Predicted GO
MF GO:0046912 transferase activity, transferring acyl groups, acyl groups converted into alkyl on transfer IEP Predicted GO
BP GO:0071704 organic substance metabolic process IEP Predicted GO
BP GO:1901071 glucosamine-containing compound metabolic process IEP Predicted GO
BP GO:1901072 glucosamine-containing compound catabolic process IEP Predicted GO
BP GO:1901136 carbohydrate derivative catabolic process IEP Predicted GO
BP GO:1901565 organonitrogen compound catabolic process IEP Predicted GO
InterPro domains Description Start Stop
IPR001611 Leu-rich_rpt 163 185
IPR026906 LRR_5 476 589
No external refs found!