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  5. PSME_00036444-RA

PSME_00036444-RA


Description : (at4g13650 : 720.0) Pentatricopeptide repeat (PPR) superfamily protein; CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat (InterPro:IPR002885); BEST Arabidopsis thaliana protein match is: Tetratricopeptide repeat (TPR)-like superfamily protein (TAIR:AT1G16480.1); Has 61118 Blast hits to 14026 proteins in 284 species: Archae - 2; Bacteria - 18; Metazoa - 154; Fungi - 167; Plants - 59907; Viruses - 0; Other Eukaryotes - 870 (source: NCBI BLink). & (q76c99|rf1_orysa : 142.0) Rf1 protein, mitochondrial precursor (PPR protein) (Fertility restorer) (Restorer for CMS) - Oryza sativa (Rice) & (reliability: 1440.0) & (original description: no original description)


Gene families : OG_42_0022529 (Orthogroups_2024-Update) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Pseudotsuga release: PSME_00036444-RA
Cluster HCCA clusters: Cluster_42


Type GO Term Name Evidence Source
MF GO:0008270 zinc ion binding IEA InterProScan predictions
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Type GO Term Name Evidence Source
BP GO:0009314 response to radiation IEP Predicted GO
BP GO:0009411 response to UV IEP Predicted GO
BP GO:0009416 response to light stimulus IEP Predicted GO
BP GO:0009628 response to abiotic stimulus IEP Predicted GO
InterPro domains Description Start Stop
IPR032867 DYW_dom 855 979
IPR002885 Pentatricopeptide_repeat 354 381
IPR002885 Pentatricopeptide_repeat 382 406
IPR002885 Pentatricopeptide_repeat 757 780
IPR002885 Pentatricopeptide_repeat 278 303
IPR002885 Pentatricopeptide_repeat 174 222
IPR002885 Pentatricopeptide_repeat 479 527
IPR002885 Pentatricopeptide_repeat 682 729
IPR002885 Pentatricopeptide_repeat 580 627
No external refs found!