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  5. PSME_00037040-RA

PSME_00037040-RA


Description : (at1g18100 : 250.0) Encodes a member of the FT and TFL1 family of phosphatidylethanolamine-binding proteins. It is expressed in seeds and up-regulated in response to ABA. Loss of function mutants show decreased rate of germination in the presence of ABA. ABA dependent regulation is mediated by both ABI3 and ABI5. ABI5 promotes MFT expression, primarily in the radicle-hypocotyl transition zone and ABI3 suppresses it in the seed.; E12A11; CONTAINS InterPro DOMAIN/s: Phosphatidylethanolamine-binding, conserved site (InterPro:IPR001858), Phosphatidylethanolamine-binding protein PEBP (InterPro:IPR008914); BEST Arabidopsis thaliana protein match is: PEBP (phosphatidylethanolamine-binding protein) family protein (TAIR:AT5G03840.1); Has 2417 Blast hits to 2417 proteins in 371 species: Archae - 0; Bacteria - 118; Metazoa - 639; Fungi - 192; Plants - 1429; Viruses - 3; Other Eukaryotes - 36 (source: NCBI BLink). & (q9xh44|cet1_tobac : 187.0) CEN-like protein 1 - Nicotiana tabacum (Common tobacco) & (reliability: 500.0) & (original description: no original description)


Gene families : OG_42_0000178 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000178_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Pseudotsuga release: PSME_00037040-RA
Cluster HCCA clusters: Cluster_90

Target Alias Description ECC score Gene Family Method Actions
Bradi1g48830 No alias PEBP (phosphatidylethanolamine-binding protein) family protein 0.04 Orthogroups_2024-Update
Brara.K01007.1 No alias florigen component *(FT) 0.02 Orthogroups_2024-Update
Glyma.18G299000 No alias PEBP (phosphatidylethanolamine-binding protein) family protein 0.03 Orthogroups_2024-Update
Pp1s34_16V6 No alias T10F20.11; mother of FT and TF1 protein (MFT)... 0.02 Orthogroups_2024-Update
Seita.1G180300.1 No alias effector protein *(TFL/BFT/CEN) 0.02 Orthogroups_2024-Update
Seita.4G122200.1 No alias effector protein *(TFL/BFT/CEN) & florigen component *(FT) 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0004146 dihydrofolate reductase activity IEP Predicted GO
MF GO:0004180 carboxypeptidase activity IEP Predicted GO
MF GO:0004185 serine-type carboxypeptidase activity IEP Predicted GO
MF GO:0004252 serine-type endopeptidase activity IEP Predicted GO
MF GO:0005509 calcium ion binding IEP Predicted GO
BP GO:0006508 proteolysis IEP Predicted GO
BP GO:0006732 coenzyme metabolic process IEP Predicted GO
BP GO:0006760 folic acid-containing compound metabolic process IEP Predicted GO
BP GO:0006811 ion transport IEP Predicted GO
BP GO:0006820 anion transport IEP Predicted GO
BP GO:0006835 dicarboxylic acid transport IEP Predicted GO
MF GO:0008233 peptidase activity IEP Predicted GO
MF GO:0008236 serine-type peptidase activity IEP Predicted GO
BP GO:0009108 coenzyme biosynthetic process IEP Predicted GO
BP GO:0009396 folic acid-containing compound biosynthetic process IEP Predicted GO
CC GO:0009523 photosystem II IEP Predicted GO
CC GO:0009654 photosystem II oxygen evolving complex IEP Predicted GO
BP GO:0015711 organic anion transport IEP Predicted GO
BP GO:0015740 C4-dicarboxylate transport IEP Predicted GO
BP GO:0015743 malate transport IEP Predicted GO
BP GO:0015849 organic acid transport IEP Predicted GO
CC GO:0016020 membrane IEP Predicted GO
CC GO:0016021 integral component of membrane IEP Predicted GO
MF GO:0016614 oxidoreductase activity, acting on CH-OH group of donors IEP Predicted GO
MF GO:0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor IEP Predicted GO
MF GO:0016646 oxidoreductase activity, acting on the CH-NH group of donors, NAD or NADP as acceptor IEP Predicted GO
MF GO:0017171 serine hydrolase activity IEP Predicted GO
CC GO:0019898 extrinsic component of membrane IEP Predicted GO
CC GO:0031224 intrinsic component of membrane IEP Predicted GO
BP GO:0042398 cellular modified amino acid biosynthetic process IEP Predicted GO
BP GO:0042558 pteridine-containing compound metabolic process IEP Predicted GO
BP GO:0042559 pteridine-containing compound biosynthetic process IEP Predicted GO
CC GO:0044425 membrane part IEP Predicted GO
BP GO:0046653 tetrahydrofolate metabolic process IEP Predicted GO
BP GO:0046654 tetrahydrofolate biosynthetic process IEP Predicted GO
BP GO:0046942 carboxylic acid transport IEP Predicted GO
BP GO:0051188 cofactor biosynthetic process IEP Predicted GO
MF GO:0070011 peptidase activity, acting on L-amino acid peptides IEP Predicted GO
CC GO:1990204 oxidoreductase complex IEP Predicted GO
InterPro domains Description Start Stop
IPR008914 PEBP 49 162
No external refs found!