- Home
- Species
- Pseudotsuga menziesii
- Sequence
- PSME_00037374-RA
PSME_00037374-RA
Description : (p49237|e13b_maize : 199.0) Glucan endo-1,3-beta-glucosidase, acidic isoform precursor (EC 3.2.1.39) ((1->3)-beta-glucan endohydrolase) ((1->3)-beta-glucanase) (Beta-1,3-endoglucanase) - Zea mays (Maize) & (at4g16260 : 182.0) Glycosyl hydrolase superfamily protein; FUNCTIONS IN: cation binding, hydrolase activity, hydrolyzing O-glycosyl compounds, catalytic activity; INVOLVED IN: defense response to fungus, incompatible interaction, response to salt stress; LOCATED IN: cell wall, plasma membrane; EXPRESSED IN: 11 plant structures; EXPRESSED DURING: LP.06 six leaves visible, LP.04 four leaves visible, 4 anthesis, petal differentiation and expansion stage, LP.08 eight leaves visible; CONTAINS InterPro DOMAIN/s: Glycoside hydrolase, catalytic core (InterPro:IPR017853), Glycoside hydrolase, family 17 (InterPro:IPR000490), Glycoside hydrolase, subgroup, catalytic core (InterPro:IPR013781); BEST Arabidopsis thaliana protein match is: beta-1,3-glucanase 1 (TAIR:AT3G57270.1); Has 2169 Blast hits to 2154 proteins in 141 species: Archae - 0; Bacteria - 6; Metazoa - 5; Fungi - 22; Plants - 2121; Viruses - 0; Other Eukaryotes - 15 (source: NCBI BLink). & (reliability: 364.0) & (original description: no original description)
Expression Profile
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
Co-expression Networks
| Type | Description | Actions |
| Neighborhood | Pseudotsuga release: PSME_00037374-RA | |
| Cluster | HCCA clusters: Cluster_40 | |
Expression Context Conservation (ECC)
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
| MA_10383303g0010 | No alias | (original description: no original description) | 0.07 | Orthogroups_2024-Update | |
| MA_10429961g0010 | No alias | (q03467|e13b_pea : 133.0) Glucan... | 0.03 | Orthogroups_2024-Update | |
| MA_10435462g0010 | No alias | (p07979|gub_nicpl : 110.0) Lichenase precursor (EC... | 0.06 | Orthogroups_2024-Update | |
| MA_6944718g0010 | No alias | (p07979|gub_nicpl : 120.0) Lichenase precursor (EC... | 0.04 | Orthogroups_2024-Update | |
| MA_837697g0010 | No alias | (p07979|gub_nicpl : 169.0) Lichenase precursor (EC... | 0.06 | Orthogroups_2024-Update | |
| PSME_00029792-RA | No alias | (p49237|e13b_maize : 197.0) Glucan... | 0.03 | Orthogroups_2024-Update | |
| PSME_00047570-RA | No alias | (at2g01630 : 150.0) O-Glycosyl hydrolases family 17... | 0.03 | Orthogroups_2024-Update | |
Functional Annotation
| Type | GO Term | Name | Evidence | Source |
| MF | GO:0003674 | molecular_function | None | Extended |
| MF | GO:0003824 | catalytic activity | None | Extended |
| MF | GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds | IEA | InterProScan predictions |
| BP | GO:0005975 | carbohydrate metabolic process | IEA | InterProScan predictions |
| BP | GO:0008150 | biological_process | None | Extended |
| BP | GO:0008152 | metabolic process | None | Extended |
| MF | GO:0016787 | hydrolase activity | None | Extended |
| MF | GO:0016798 | hydrolase activity, acting on glycosyl bonds | None | Extended |
| BP | GO:0044238 | primary metabolic process | None | Extended |
| BP | GO:0071704 | organic substance metabolic process | None | Extended |
| Type | GO Term | Name | Evidence | Source |
No Predicted GO terms available for this sequence |
| InterPro domains | Description | Start | Stop |
| IPR000490 | Glyco_hydro_17 | 1 | 159 |
