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  5. PSME_00037442-RA

PSME_00037442-RA


Description : (at1g15890 : 222.0) Disease resistance protein (CC-NBS-LRR class) family; FUNCTIONS IN: ATP binding; INVOLVED IN: N-terminal protein myristoylation, apoptosis, defense response; LOCATED IN: cellular_component unknown; EXPRESSED IN: 8 plant structures; EXPRESSED DURING: 6 growth stages; CONTAINS InterPro DOMAIN/s: NB-ARC (InterPro:IPR002182), Leucine-rich repeat (InterPro:IPR001611), Disease resistance protein (InterPro:IPR000767); BEST Arabidopsis thaliana protein match is: Disease resistance protein (CC-NBS-LRR class) family (TAIR:AT5G43730.1); Has 17730 Blast hits to 16510 proteins in 695 species: Archae - 12; Bacteria - 829; Metazoa - 2844; Fungi - 202; Plants - 13567; Viruses - 0; Other Eukaryotes - 276 (source: NCBI BLink). & (reliability: 422.0) & (original description: no original description)


Gene families : OG_42_0000113 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000113_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Pseudotsuga release: PSME_00037442-RA
Cluster HCCA clusters: Cluster_156

Target Alias Description ECC score Gene Family Method Actions
Bradi5g15560 No alias NB-ARC domain-containing disease resistance protein 0.03 Orthogroups_2024-Update
MA_549555g0010 No alias no hits & (original description: no original description) 0.05 Orthogroups_2024-Update
MA_674039g0010 No alias (at5g63020 : 154.0) Disease resistance protein... 0.03 Orthogroups_2024-Update
MA_741495g0010 No alias (at4g27220 : 179.0) NB-ARC domain-containing disease... 0.03 Orthogroups_2024-Update
MA_9432601g0010 No alias (at5g63020 : 105.0) Disease resistance protein... 0.02 Orthogroups_2024-Update
PSME_00004155-RA No alias (at1g12220 : 266.0) Resistance gene, mediates resistance... 0.04 Orthogroups_2024-Update
PSME_00004450-RA No alias (at4g10780 : 156.0) LRR and NB-ARC domains-containing... 0.08 Orthogroups_2024-Update
PSME_00005482-RA No alias (at4g27220 : 208.0) NB-ARC domain-containing disease... 0.04 Orthogroups_2024-Update
PSME_00011883-RA No alias (at4g27220 : 218.0) NB-ARC domain-containing disease... 0.06 Orthogroups_2024-Update
PSME_00033628-RA No alias (at4g27220 : 254.0) NB-ARC domain-containing disease... 0.06 Orthogroups_2024-Update
PSME_00034037-RA No alias (at1g12210 : 130.0) RFL1 has high sequence similarity to... 0.04 Orthogroups_2024-Update
PSME_00040363-RA No alias (at5g63020 : 222.0) Disease resistance protein... 0.04 Orthogroups_2024-Update
PSME_00048939-RA No alias (at1g15890 : 95.5) Disease resistance protein... 0.02 Orthogroups_2024-Update
PSME_00048940-RA No alias (at4g27220 : 141.0) NB-ARC domain-containing disease... 0.04 Orthogroups_2024-Update
PSME_00056632-RA No alias (at1g61310 : 186.0) LRR and NB-ARC domains-containing... 0.01 Orthogroups_2024-Update
PSME_00056885-RA No alias (at4g27220 : 223.0) NB-ARC domain-containing disease... 0.04 Orthogroups_2024-Update
Potri.001G313301 No alias Disease resistance protein (CC-NBS-LRR class) family 0.03 Orthogroups_2024-Update
Potri.019G002800 No alias LRR and NB-ARC domains-containing disease resistance protein 0.03 Orthogroups_2024-Update
Potri.T013900 No alias NB-ARC domain-containing disease resistance protein 0.03 Orthogroups_2024-Update
Potri.T026800 No alias LRR and NB-ARC domains-containing disease resistance protein 0.03 Orthogroups_2024-Update
Potri.T028700 No alias NB-ARC domain-containing disease resistance protein 0.03 Orthogroups_2024-Update
Seita.7G165200.1 No alias Unknown function 0.01 Orthogroups_2024-Update
Sobic.003G321300.1 No alias Unknown function 0.03 Orthogroups_2024-Update
Solyc11g007790 No alias LOW QUALITY:Nbs-lrr resistance protein (AHRD V3.3 ***... 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0043531 ADP binding IEA InterProScan predictions
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Type GO Term Name Evidence Source
MF GO:0001871 pattern binding IEP Predicted GO
MF GO:0003997 acyl-CoA oxidase activity IEP Predicted GO
MF GO:0004559 alpha-mannosidase activity IEP Predicted GO
MF GO:0004672 protein kinase activity IEP Predicted GO
MF GO:0004869 cysteine-type endopeptidase inhibitor activity IEP Predicted GO
CC GO:0005777 peroxisome IEP Predicted GO
BP GO:0005996 monosaccharide metabolic process IEP Predicted GO
BP GO:0006013 mannose metabolic process IEP Predicted GO
BP GO:0006464 cellular protein modification process IEP Predicted GO
BP GO:0006468 protein phosphorylation IEP Predicted GO
BP GO:0006635 fatty acid beta-oxidation IEP Predicted GO
BP GO:0006793 phosphorus metabolic process IEP Predicted GO
BP GO:0006796 phosphate-containing compound metabolic process IEP Predicted GO
BP GO:0006807 nitrogen compound metabolic process IEP Predicted GO
BP GO:0006820 anion transport IEP Predicted GO
BP GO:0008037 cell recognition IEP Predicted GO
BP GO:0008152 metabolic process IEP Predicted GO
BP GO:0009062 fatty acid catabolic process IEP Predicted GO
MF GO:0015923 mannosidase activity IEP Predicted GO
BP GO:0016042 lipid catabolic process IEP Predicted GO
BP GO:0016054 organic acid catabolic process IEP Predicted GO
BP GO:0016226 iron-sulfur cluster assembly IEP Predicted GO
MF GO:0016301 kinase activity IEP Predicted GO
BP GO:0016310 phosphorylation IEP Predicted GO
MF GO:0016634 oxidoreductase activity, acting on the CH-CH group of donors, oxygen as acceptor IEP Predicted GO
MF GO:0016671 oxidoreductase activity, acting on a sulfur group of donors, disulfide as acceptor IEP Predicted GO
MF GO:0016772 transferase activity, transferring phosphorus-containing groups IEP Predicted GO
MF GO:0016773 phosphotransferase activity, alcohol group as acceptor IEP Predicted GO
MF GO:0016840 carbon-nitrogen lyase activity IEP Predicted GO
MF GO:0016843 amine-lyase activity IEP Predicted GO
MF GO:0016844 strictosidine synthase activity IEP Predicted GO
BP GO:0019318 hexose metabolic process IEP Predicted GO
BP GO:0019395 fatty acid oxidation IEP Predicted GO
BP GO:0019538 protein metabolic process IEP Predicted GO
BP GO:0022414 reproductive process IEP Predicted GO
MF GO:0030246 carbohydrate binding IEP Predicted GO
MF GO:0030247 polysaccharide binding IEP Predicted GO
BP GO:0030258 lipid modification IEP Predicted GO
BP GO:0031163 metallo-sulfur cluster assembly IEP Predicted GO
MF GO:0033743 peptide-methionine (R)-S-oxide reductase activity IEP Predicted GO
BP GO:0034440 lipid oxidation IEP Predicted GO
BP GO:0036211 protein modification process IEP Predicted GO
CC GO:0042579 microbody IEP Predicted GO
BP GO:0043170 macromolecule metabolic process IEP Predicted GO
BP GO:0043412 macromolecule modification IEP Predicted GO
BP GO:0044238 primary metabolic process IEP Predicted GO
BP GO:0044242 cellular lipid catabolic process IEP Predicted GO
BP GO:0044260 cellular macromolecule metabolic process IEP Predicted GO
BP GO:0044267 cellular protein metabolic process IEP Predicted GO
BP GO:0046395 carboxylic acid catabolic process IEP Predicted GO
BP GO:0048544 recognition of pollen IEP Predicted GO
MF GO:0050662 coenzyme binding IEP Predicted GO
MF GO:0061630 ubiquitin protein ligase activity IEP Predicted GO
MF GO:0061659 ubiquitin-like protein ligase activity IEP Predicted GO
BP GO:0071704 organic substance metabolic process IEP Predicted GO
MF GO:0071949 FAD binding IEP Predicted GO
BP GO:0072329 monocarboxylic acid catabolic process IEP Predicted GO
MF GO:0140096 catalytic activity, acting on a protein IEP Predicted GO
BP GO:1901564 organonitrogen compound metabolic process IEP Predicted GO
InterPro domains Description Start Stop
IPR025875 Leu-rich_rpt_4 740 776
IPR002182 NB-ARC 333 565
No external refs found!