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  5. PSME_00039920-RA

PSME_00039920-RA


Description : (at3g21360 : 263.0) 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein; FUNCTIONS IN: oxidoreductase activity; INVOLVED IN: oxidation reduction; LOCATED IN: nucleus; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Taurine catabolism dioxygenase TauD/TfdA (InterPro:IPR003819); Has 1029 Blast hits to 1021 proteins in 229 species: Archae - 0; Bacteria - 729; Metazoa - 46; Fungi - 17; Plants - 110; Viruses - 0; Other Eukaryotes - 127 (source: NCBI BLink). & (reliability: 526.0) & (original description: no original description)


Gene families : OG_42_0001175 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0001175_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Pseudotsuga release: PSME_00039920-RA
Cluster HCCA clusters: Cluster_150

Target Alias Description ECC score Gene Family Method Actions
425605 No alias 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase... 0.04 Orthogroups_2024-Update
Bradi2g05640 No alias 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase... 0.02 Orthogroups_2024-Update
MA_10427711g0010 No alias (at3g21360 : 233.0) 2-oxoglutarate (2OG) and... 0.04 Orthogroups_2024-Update
MA_10431045g0030 No alias (at3g21360 : 264.0) 2-oxoglutarate (2OG) and... 0.02 Orthogroups_2024-Update
MA_220550g0010 No alias (at3g21360 : 241.0) 2-oxoglutarate (2OG) and... 0.04 Orthogroups_2024-Update
MA_498632g0010 No alias (at3g21360 : 250.0) 2-oxoglutarate (2OG) and... 0.05 Orthogroups_2024-Update
Mp4g14250.1 No alias Clavaminate synthase-like protein At3g21360... 0.01 Orthogroups_2024-Update
PSME_00006834-RA No alias (at3g21360 : 254.0) 2-oxoglutarate (2OG) and... 0.04 Orthogroups_2024-Update
PSME_00040293-RA No alias (at3g21360 : 239.0) 2-oxoglutarate (2OG) and... 0.04 Orthogroups_2024-Update
PSME_00040423-RA No alias (at3g21360 : 246.0) 2-oxoglutarate (2OG) and... 0.05 Orthogroups_2024-Update
PSME_00042467-RA No alias (at3g21360 : 259.0) 2-oxoglutarate (2OG) and... 0.05 Orthogroups_2024-Update
PSME_00044667-RA No alias (at3g21360 : 243.0) 2-oxoglutarate (2OG) and... 0.03 Orthogroups_2024-Update
PSME_00050620-RA No alias (at3g21360 : 240.0) 2-oxoglutarate (2OG) and... 0.04 Orthogroups_2024-Update
PSME_00050979-RA No alias (at3g21360 : 253.0) 2-oxoglutarate (2OG) and... 0.05 Orthogroups_2024-Update
PSME_00053552-RA No alias (at3g21360 : 263.0) 2-oxoglutarate (2OG) and... 0.04 Orthogroups_2024-Update
PSME_00054983-RA No alias (at3g21360 : 156.0) 2-oxoglutarate (2OG) and... 0.05 Orthogroups_2024-Update
Potri.010G131300 No alias 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase... 0.03 Orthogroups_2024-Update
Sopen03g039870 No alias Taurine catabolism dioxygenase TauD, TfdA family 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0016491 oxidoreductase activity IEA InterProScan predictions
BP GO:0055114 oxidation-reduction process IEA InterProScan predictions
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Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEP Predicted GO
MF GO:0004601 peroxidase activity IEP Predicted GO
MF GO:0004612 phosphoenolpyruvate carboxykinase (ATP) activity IEP Predicted GO
MF GO:0004672 protein kinase activity IEP Predicted GO
MF GO:0004866 endopeptidase inhibitor activity IEP Predicted GO
MF GO:0005488 binding IEP Predicted GO
MF GO:0005524 ATP binding IEP Predicted GO
CC GO:0005759 mitochondrial matrix IEP Predicted GO
BP GO:0006094 gluconeogenesis IEP Predicted GO
BP GO:0006464 cellular protein modification process IEP Predicted GO
BP GO:0006468 protein phosphorylation IEP Predicted GO
BP GO:0006793 phosphorus metabolic process IEP Predicted GO
BP GO:0006796 phosphate-containing compound metabolic process IEP Predicted GO
BP GO:0006807 nitrogen compound metabolic process IEP Predicted GO
BP GO:0006950 response to stress IEP Predicted GO
BP GO:0006979 response to oxidative stress IEP Predicted GO
BP GO:0008156 negative regulation of DNA replication IEP Predicted GO
MF GO:0008168 methyltransferase activity IEP Predicted GO
MF GO:0016209 antioxidant activity IEP Predicted GO
MF GO:0016301 kinase activity IEP Predicted GO
BP GO:0016310 phosphorylation IEP Predicted GO
MF GO:0016684 oxidoreductase activity, acting on peroxide as acceptor IEP Predicted GO
MF GO:0016740 transferase activity IEP Predicted GO
MF GO:0016741 transferase activity, transferring one-carbon groups IEP Predicted GO
MF GO:0016772 transferase activity, transferring phosphorus-containing groups IEP Predicted GO
MF GO:0016773 phosphotransferase activity, alcohol group as acceptor IEP Predicted GO
MF GO:0017076 purine nucleotide binding IEP Predicted GO
BP GO:0019319 hexose biosynthetic process IEP Predicted GO
BP GO:0019538 protein metabolic process IEP Predicted GO
MF GO:0020037 heme binding IEP Predicted GO
MF GO:0030414 peptidase inhibitor activity IEP Predicted GO
MF GO:0030554 adenyl nucleotide binding IEP Predicted GO
CC GO:0031974 membrane-enclosed lumen IEP Predicted GO
MF GO:0032553 ribonucleotide binding IEP Predicted GO
MF GO:0032555 purine ribonucleotide binding IEP Predicted GO
MF GO:0032559 adenyl ribonucleotide binding IEP Predicted GO
MF GO:0036094 small molecule binding IEP Predicted GO
BP GO:0036211 protein modification process IEP Predicted GO
MF GO:0043167 ion binding IEP Predicted GO
MF GO:0043168 anion binding IEP Predicted GO
BP GO:0043170 macromolecule metabolic process IEP Predicted GO
CC GO:0043233 organelle lumen IEP Predicted GO
BP GO:0043412 macromolecule modification IEP Predicted GO
MF GO:0043531 ADP binding IEP Predicted GO
BP GO:0044238 primary metabolic process IEP Predicted GO
BP GO:0044260 cellular macromolecule metabolic process IEP Predicted GO
BP GO:0044267 cellular protein metabolic process IEP Predicted GO
BP GO:0045005 DNA-dependent DNA replication maintenance of fidelity IEP Predicted GO
BP GO:0046364 monosaccharide biosynthetic process IEP Predicted GO
MF GO:0046906 tetrapyrrole binding IEP Predicted GO
BP GO:0048478 replication fork protection IEP Predicted GO
BP GO:0050896 response to stimulus IEP Predicted GO
BP GO:0051053 negative regulation of DNA metabolic process IEP Predicted GO
MF GO:0061134 peptidase regulator activity IEP Predicted GO
MF GO:0061135 endopeptidase regulator activity IEP Predicted GO
CC GO:0070013 intracellular organelle lumen IEP Predicted GO
BP GO:0071704 organic substance metabolic process IEP Predicted GO
BP GO:0090329 regulation of DNA-dependent DNA replication IEP Predicted GO
MF GO:0097159 organic cyclic compound binding IEP Predicted GO
MF GO:0097367 carbohydrate derivative binding IEP Predicted GO
MF GO:0140096 catalytic activity, acting on a protein IEP Predicted GO
MF GO:1901265 nucleoside phosphate binding IEP Predicted GO
MF GO:1901363 heterocyclic compound binding IEP Predicted GO
BP GO:1901564 organonitrogen compound metabolic process IEP Predicted GO
BP GO:2000104 negative regulation of DNA-dependent DNA replication IEP Predicted GO
InterPro domains Description Start Stop
IPR003819 TauD/TfdA-like 44 325
No external refs found!