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Description : (at3g49710 : 638.0) Pentatricopeptide repeat (PPR) superfamily protein; CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat (InterPro:IPR002885); BEST Arabidopsis thaliana protein match is: pentatricopeptide (PPR) repeat-containing protein (TAIR:AT2G22070.1); Has 44619 Blast hits to 14217 proteins in 272 species: Archae - 0; Bacteria - 17; Metazoa - 134; Fungi - 114; Plants - 43678; Viruses - 0; Other Eukaryotes - 676 (source: NCBI BLink). & (q76c99|rf1_orysa : 124.0) Rf1 protein, mitochondrial precursor (PPR protein) (Fertility restorer) (Restorer for CMS) - Oryza sativa (Rice) & (reliability: 1276.0) & (original description: no original description)
Gene families : OG_42_0128095 (Orthogroups_2024-Update) Phylogenetic Tree(s): No tree available for this family
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | Pseudotsuga release: PSME_00040009-RA | |
| Cluster | HCCA clusters: Cluster_42 |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0008270 | zinc ion binding | IEA | InterProScan predictions |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0003848 | 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine diphosphokinase activity | IEP | Predicted GO |
| MF | GO:0005048 | signal sequence binding | IEP | Predicted GO |
| BP | GO:0006621 | protein retention in ER lumen | IEP | Predicted GO |
| BP | GO:0006760 | folic acid-containing compound metabolic process | IEP | Predicted GO |
| BP | GO:0009396 | folic acid-containing compound biosynthetic process | IEP | Predicted GO |
| MF | GO:0016307 | phosphatidylinositol phosphate kinase activity | IEP | Predicted GO |
| MF | GO:0016778 | diphosphotransferase activity | IEP | Predicted GO |
| BP | GO:0032507 | maintenance of protein location in cell | IEP | Predicted GO |
| MF | GO:0033218 | amide binding | IEP | Predicted GO |
| BP | GO:0035437 | maintenance of protein localization in endoplasmic reticulum | IEP | Predicted GO |
| MF | GO:0042277 | peptide binding | IEP | Predicted GO |
| BP | GO:0042398 | cellular modified amino acid biosynthetic process | IEP | Predicted GO |
| BP | GO:0042558 | pteridine-containing compound metabolic process | IEP | Predicted GO |
| BP | GO:0042559 | pteridine-containing compound biosynthetic process | IEP | Predicted GO |
| BP | GO:0045185 | maintenance of protein location | IEP | Predicted GO |
| MF | GO:0046923 | ER retention sequence binding | IEP | Predicted GO |
| BP | GO:0051235 | maintenance of location | IEP | Predicted GO |
| BP | GO:0051651 | maintenance of location in cell | IEP | Predicted GO |
| BP | GO:0072595 | maintenance of protein localization in organelle | IEP | Predicted GO |
| InterPro domains | Description | Start | Stop |
|---|---|---|---|
| IPR032867 | DYW_dom | 582 | 707 |
| IPR002885 | Pentatricopeptide_repeat | 550 | 578 |
| IPR002885 | Pentatricopeptide_repeat | 483 | 507 |
| IPR002885 | Pentatricopeptide_repeat | 181 | 204 |
| IPR002885 | Pentatricopeptide_repeat | 383 | 408 |
| IPR002885 | Pentatricopeptide_repeat | 106 | 151 |
| IPR002885 | Pentatricopeptide_repeat | 409 | 456 |
| IPR002885 | Pentatricopeptide_repeat | 308 | 355 |
| IPR002885 | Pentatricopeptide_repeat | 208 | 254 |
| No external refs found! |