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Description : (at1g10650 : 137.0) SBP (S-ribonuclease binding protein) family protein; FUNCTIONS IN: zinc ion binding; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, RING-type (InterPro:IPR001841), S-ribonuclease binding protein, SBP1, pollen (InterPro:IPR017066); BEST Arabidopsis thaliana protein match is: SBP (S-ribonuclease binding protein) family protein (TAIR:AT1G60610.3); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 274.0) & (original description: no original description)
Gene families : OG_42_0000224 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000224_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | Pseudotsuga release: PSME_00040898-RA | |
| Cluster | HCCA clusters: Cluster_28 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| 103907 | No alias | SBP (S-ribonuclease binding protein) family protein | 0.02 | Orthogroups_2024-Update | |
| Bradi3g52030 | No alias | SBP (S-ribonuclease binding protein) family protein | 0.03 | Orthogroups_2024-Update | |
| Bradi5g08760 | No alias | SBP (S-ribonuclease binding protein) family protein | 0.02 | Orthogroups_2024-Update | |
| Bradi5g08790 | No alias | SBP (S-ribonuclease binding protein) family protein | 0.05 | Orthogroups_2024-Update | |
| Brara.C04565.1 | No alias | Unknown function | 0.03 | Orthogroups_2024-Update | |
| Brara.G03637.1 | No alias | E3 ubiquitin ligase *(BRG) | 0.04 | Orthogroups_2024-Update | |
| GRMZM2G057262 | No alias | SBP (S-ribonuclease binding protein) family protein | 0.03 | Orthogroups_2024-Update | |
| Glyma.01G029500 | No alias | SBP (S-ribonuclease binding protein) family protein | 0.03 | Orthogroups_2024-Update | |
| Glyma.05G068400 | No alias | SBP (S-ribonuclease binding protein) family protein | 0.05 | Orthogroups_2024-Update | |
| Glyma.09G019900 | No alias | SBP (S-ribonuclease binding protein) family protein | 0.03 | Orthogroups_2024-Update | |
| HORVU4Hr1G003180.3 | No alias | E3 ubiquitin ligase *(BRG) | 0.02 | Orthogroups_2024-Update | |
| LOC_Os03g15730 | No alias | S-RNase-binding protein, putative, expressed | 0.02 | Orthogroups_2024-Update | |
| LOC_Os04g32980 | No alias | protein binding protein, putative, expressed | 0.02 | Orthogroups_2024-Update | |
| LOC_Os04g33030 | No alias | protein binding protein, putative, expressed | 0.02 | Orthogroups_2024-Update | |
| LOC_Os11g17940 | No alias | expressed protein | 0.03 | Orthogroups_2024-Update | |
| MA_114475g0010 | No alias | (at1g45976 : 149.0) S-ribonuclease binding protein 1... | 0.06 | Orthogroups_2024-Update | |
| Potri.010G042200 | No alias | SBP (S-ribonuclease binding protein) family protein | 0.03 | Orthogroups_2024-Update | |
| Potri.012G119200 | No alias | SBP (S-ribonuclease binding protein) family protein | 0.02 | Orthogroups_2024-Update | |
| Pp1s4_427V6 | No alias | F2G19.22; expressed protein [Arabidopsis thaliana] | 0.03 | Orthogroups_2024-Update | |
| Seita.1G276600.1 | No alias | Unknown function | 0.02 | Orthogroups_2024-Update | |
| Sobic.004G278000.1 | No alias | Unknown function | 0.03 | Orthogroups_2024-Update | |
| Sobic.005G142101.1 | No alias | Unknown function | 0.03 | Orthogroups_2024-Update | |
| Solyc08g077460 | No alias | SBP (S-ribonuclease binding protein) family protein... | 0.04 | Orthogroups_2024-Update | |
| Sopen01g053650 | No alias | hypothetical protein | 0.03 | Orthogroups_2024-Update | |
| Sopen02g018310 | No alias | Zinc finger, C3HC4 type (RING finger) | 0.03 | Orthogroups_2024-Update |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0000155 | phosphorelay sensor kinase activity | IEP | Predicted GO |
| MF | GO:0003676 | nucleic acid binding | IEP | Predicted GO |
| MF | GO:0003677 | DNA binding | IEP | Predicted GO |
| MF | GO:0003700 | DNA-binding transcription factor activity | IEP | Predicted GO |
| MF | GO:0004175 | endopeptidase activity | IEP | Predicted GO |
| MF | GO:0004222 | metalloendopeptidase activity | IEP | Predicted GO |
| MF | GO:0004672 | protein kinase activity | IEP | Predicted GO |
| MF | GO:0004673 | protein histidine kinase activity | IEP | Predicted GO |
| MF | GO:0004721 | phosphoprotein phosphatase activity | IEP | Predicted GO |
| MF | GO:0005096 | GTPase activator activity | IEP | Predicted GO |
| MF | GO:0005515 | protein binding | IEP | Predicted GO |
| BP | GO:0006355 | regulation of transcription, DNA-templated | IEP | Predicted GO |
| BP | GO:0006464 | cellular protein modification process | IEP | Predicted GO |
| BP | GO:0006468 | protein phosphorylation | IEP | Predicted GO |
| BP | GO:0006793 | phosphorus metabolic process | IEP | Predicted GO |
| BP | GO:0006796 | phosphate-containing compound metabolic process | IEP | Predicted GO |
| BP | GO:0006807 | nitrogen compound metabolic process | IEP | Predicted GO |
| BP | GO:0007155 | cell adhesion | IEP | Predicted GO |
| MF | GO:0008047 | enzyme activator activity | IEP | Predicted GO |
| MF | GO:0008138 | protein tyrosine/serine/threonine phosphatase activity | IEP | Predicted GO |
| MF | GO:0008237 | metallopeptidase activity | IEP | Predicted GO |
| BP | GO:0009889 | regulation of biosynthetic process | IEP | Predicted GO |
| BP | GO:0010468 | regulation of gene expression | IEP | Predicted GO |
| BP | GO:0010556 | regulation of macromolecule biosynthetic process | IEP | Predicted GO |
| BP | GO:0015969 | guanosine tetraphosphate metabolic process | IEP | Predicted GO |
| MF | GO:0016301 | kinase activity | IEP | Predicted GO |
| BP | GO:0016310 | phosphorylation | IEP | Predicted GO |
| BP | GO:0016311 | dephosphorylation | IEP | Predicted GO |
| MF | GO:0016740 | transferase activity | IEP | Predicted GO |
| MF | GO:0016772 | transferase activity, transferring phosphorus-containing groups | IEP | Predicted GO |
| MF | GO:0016773 | phosphotransferase activity, alcohol group as acceptor | IEP | Predicted GO |
| MF | GO:0016775 | phosphotransferase activity, nitrogenous group as acceptor | IEP | Predicted GO |
| BP | GO:0019219 | regulation of nucleobase-containing compound metabolic process | IEP | Predicted GO |
| BP | GO:0019222 | regulation of metabolic process | IEP | Predicted GO |
| BP | GO:0019538 | protein metabolic process | IEP | Predicted GO |
| BP | GO:0022610 | biological adhesion | IEP | Predicted GO |
| MF | GO:0030695 | GTPase regulator activity | IEP | Predicted GO |
| CC | GO:0031012 | extracellular matrix | IEP | Predicted GO |
| BP | GO:0031323 | regulation of cellular metabolic process | IEP | Predicted GO |
| BP | GO:0031326 | regulation of cellular biosynthetic process | IEP | Predicted GO |
| BP | GO:0033865 | nucleoside bisphosphate metabolic process | IEP | Predicted GO |
| BP | GO:0033875 | ribonucleoside bisphosphate metabolic process | IEP | Predicted GO |
| BP | GO:0034032 | purine nucleoside bisphosphate metabolic process | IEP | Predicted GO |
| BP | GO:0034035 | purine ribonucleoside bisphosphate metabolic process | IEP | Predicted GO |
| BP | GO:0036211 | protein modification process | IEP | Predicted GO |
| MF | GO:0042393 | histone binding | IEP | Predicted GO |
| BP | GO:0043170 | macromolecule metabolic process | IEP | Predicted GO |
| BP | GO:0043412 | macromolecule modification | IEP | Predicted GO |
| MF | GO:0043565 | sequence-specific DNA binding | IEP | Predicted GO |
| BP | GO:0044237 | cellular metabolic process | IEP | Predicted GO |
| BP | GO:0044260 | cellular macromolecule metabolic process | IEP | Predicted GO |
| BP | GO:0044267 | cellular protein metabolic process | IEP | Predicted GO |
| CC | GO:0044421 | extracellular region part | IEP | Predicted GO |
| BP | GO:0050789 | regulation of biological process | IEP | Predicted GO |
| BP | GO:0050794 | regulation of cellular process | IEP | Predicted GO |
| BP | GO:0051171 | regulation of nitrogen compound metabolic process | IEP | Predicted GO |
| BP | GO:0051252 | regulation of RNA metabolic process | IEP | Predicted GO |
| BP | GO:0060255 | regulation of macromolecule metabolic process | IEP | Predicted GO |
| BP | GO:0065007 | biological regulation | IEP | Predicted GO |
| BP | GO:0080090 | regulation of primary metabolic process | IEP | Predicted GO |
| MF | GO:0140096 | catalytic activity, acting on a protein | IEP | Predicted GO |
| MF | GO:0140110 | transcription regulator activity | IEP | Predicted GO |
| BP | GO:1901564 | organonitrogen compound metabolic process | IEP | Predicted GO |
| BP | GO:1903506 | regulation of nucleic acid-templated transcription | IEP | Predicted GO |
| BP | GO:2000112 | regulation of cellular macromolecule biosynthetic process | IEP | Predicted GO |
| BP | GO:2001141 | regulation of RNA biosynthetic process | IEP | Predicted GO |
No InterPro domains available for this sequence
| No external refs found! |