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  5. PSME_00041013-RA

PSME_00041013-RA


Description : (at1g17550 : 265.0) Protein Phosphatase 2C; homology to ABI2 (HAB2); FUNCTIONS IN: protein serine/threonine phosphatase activity, catalytic activity; INVOLVED IN: protein amino acid dephosphorylation; LOCATED IN: protein serine/threonine phosphatase complex; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Protein phosphatase 2C, manganese/magnesium aspartate binding site (InterPro:IPR000222), Protein phosphatase 2C-related (InterPro:IPR001932), Protein phosphatase 2C (InterPro:IPR015655), Protein phosphatase 2C, N-terminal (InterPro:IPR014045); BEST Arabidopsis thaliana protein match is: homology to ABI1 (TAIR:AT1G72770.3); Has 6552 Blast hits to 6537 proteins in 424 species: Archae - 4; Bacteria - 229; Metazoa - 1602; Fungi - 744; Plants - 2705; Viruses - 7; Other Eukaryotes - 1261 (source: NCBI BLink). & (reliability: 528.0) & (original description: no original description)


Gene families : OG_42_0000303 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000303_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Pseudotsuga release: PSME_00041013-RA
Cluster HCCA clusters: Cluster_3

Target Alias Description ECC score Gene Family Method Actions
At3g11410 No alias Protein phosphatase 2C 37... 0.03 Orthogroups_2024-Update
At5g59220 No alias Probable protein phosphatase 2C 78... 0.03 Orthogroups_2024-Update
Bradi2g18510 No alias homology to ABI1 0.01 Orthogroups_2024-Update
Bradi2g54810 No alias highly ABA-induced PP2C gene 3 0.01 Orthogroups_2024-Update
Brara.A03410.1 No alias clade A phosphatase 0.03 Orthogroups_2024-Update
Brara.E02938.1 No alias clade A phosphatase 0.04 Orthogroups_2024-Update
Brara.F01236.1 No alias regulatory phosphatase component *(ABI1/ABI2) of... 0.03 Orthogroups_2024-Update
GRMZM2G082487 No alias highly ABA-induced PP2C gene 3 0.04 Orthogroups_2024-Update
Glyma.01G225100 No alias highly ABA-induced PP2C gene 3 0.03 Orthogroups_2024-Update
HORVU3Hr1G067380.4 No alias regulatory phosphatase component *(ABI1/ABI2) of... 0.02 Orthogroups_2024-Update
HORVU4Hr1G060370.1 No alias clade A phosphatase 0.03 Orthogroups_2024-Update
LOC_Os01g46760 No alias protein phosphatase 2C, putative, expressed 0.02 Orthogroups_2024-Update
MA_10431543g0010 No alias (at4g26080 : 258.0) Involved in abscisic acid (ABA)... 0.03 Orthogroups_2024-Update
MA_18653g0010 No alias (at2g29380 : 286.0) highly ABA-induced PP2C gene 3... 0.03 Orthogroups_2024-Update
PSME_00003875-RA No alias (at5g59220 : 245.0) highly ABA-induced PP2C gene 1... 0.01 Orthogroups_2024-Update
Potri.012G131800 No alias Protein phosphatase 2C family protein 0.03 Orthogroups_2024-Update
Potri.015G133900 No alias Protein phosphatase 2C family protein 0.03 Orthogroups_2024-Update
Seita.3G164700.1 No alias regulatory phosphatase component *(ABI1/ABI2) of... 0.04 Orthogroups_2024-Update
Seita.7G021400.1 No alias clade A phosphatase 0.03 Orthogroups_2024-Update
Seita.9G460200.1 No alias clade A phosphatase 0.02 Orthogroups_2024-Update
Solyc12g096020 No alias Protein phosphatase 2c (AHRD V3.3 *** F8WL78_CITUN) 0.03 Orthogroups_2024-Update
Sopen12g031910 No alias Protein phosphatase 2C 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0003824 catalytic activity IEA InterProScan predictions
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Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEP Predicted GO
MF GO:0003682 chromatin binding IEP Predicted GO
MF GO:0003700 DNA-binding transcription factor activity IEP Predicted GO
MF GO:0003779 actin binding IEP Predicted GO
MF GO:0004014 adenosylmethionine decarboxylase activity IEP Predicted GO
MF GO:0004672 protein kinase activity IEP Predicted GO
CC GO:0005634 nucleus IEP Predicted GO
CC GO:0005667 transcription factor complex IEP Predicted GO
CC GO:0005672 transcription factor TFIIA complex IEP Predicted GO
BP GO:0006352 DNA-templated transcription, initiation IEP Predicted GO
BP GO:0006355 regulation of transcription, DNA-templated IEP Predicted GO
BP GO:0006367 transcription initiation from RNA polymerase II promoter IEP Predicted GO
BP GO:0006464 cellular protein modification process IEP Predicted GO
BP GO:0006468 protein phosphorylation IEP Predicted GO
BP GO:0006576 cellular biogenic amine metabolic process IEP Predicted GO
BP GO:0006595 polyamine metabolic process IEP Predicted GO
BP GO:0006596 polyamine biosynthetic process IEP Predicted GO
BP GO:0006597 spermine biosynthetic process IEP Predicted GO
BP GO:0006793 phosphorus metabolic process IEP Predicted GO
BP GO:0006796 phosphate-containing compound metabolic process IEP Predicted GO
BP GO:0008215 spermine metabolic process IEP Predicted GO
BP GO:0008216 spermidine metabolic process IEP Predicted GO
BP GO:0008295 spermidine biosynthetic process IEP Predicted GO
BP GO:0009309 amine biosynthetic process IEP Predicted GO
BP GO:0009889 regulation of biosynthetic process IEP Predicted GO
BP GO:0010468 regulation of gene expression IEP Predicted GO
BP GO:0010556 regulation of macromolecule biosynthetic process IEP Predicted GO
BP GO:0010629 negative regulation of gene expression IEP Predicted GO
MF GO:0016301 kinase activity IEP Predicted GO
BP GO:0016310 phosphorylation IEP Predicted GO
BP GO:0016458 gene silencing IEP Predicted GO
MF GO:0016651 oxidoreductase activity, acting on NAD(P)H IEP Predicted GO
MF GO:0016772 transferase activity, transferring phosphorus-containing groups IEP Predicted GO
MF GO:0016773 phosphotransferase activity, alcohol group as acceptor IEP Predicted GO
BP GO:0019219 regulation of nucleobase-containing compound metabolic process IEP Predicted GO
BP GO:0019222 regulation of metabolic process IEP Predicted GO
BP GO:0031047 gene silencing by RNA IEP Predicted GO
BP GO:0031323 regulation of cellular metabolic process IEP Predicted GO
BP GO:0031326 regulation of cellular biosynthetic process IEP Predicted GO
BP GO:0032774 RNA biosynthetic process IEP Predicted GO
BP GO:0036211 protein modification process IEP Predicted GO
BP GO:0042401 cellular biogenic amine biosynthetic process IEP Predicted GO
CC GO:0043227 membrane-bounded organelle IEP Predicted GO
CC GO:0043231 intracellular membrane-bounded organelle IEP Predicted GO
BP GO:0043412 macromolecule modification IEP Predicted GO
BP GO:0044106 cellular amine metabolic process IEP Predicted GO
CC GO:0044798 nuclear transcription factor complex IEP Predicted GO
MF GO:0050664 oxidoreductase activity, acting on NAD(P)H, oxygen as acceptor IEP Predicted GO
BP GO:0050789 regulation of biological process IEP Predicted GO
BP GO:0050794 regulation of cellular process IEP Predicted GO
MF GO:0051087 chaperone binding IEP Predicted GO
BP GO:0051171 regulation of nitrogen compound metabolic process IEP Predicted GO
BP GO:0051252 regulation of RNA metabolic process IEP Predicted GO
BP GO:0060255 regulation of macromolecule metabolic process IEP Predicted GO
BP GO:0065007 biological regulation IEP Predicted GO
BP GO:0080090 regulation of primary metabolic process IEP Predicted GO
CC GO:0090575 RNA polymerase II transcription factor complex IEP Predicted GO
BP GO:0097164 ammonium ion metabolic process IEP Predicted GO
MF GO:0140096 catalytic activity, acting on a protein IEP Predicted GO
MF GO:0140110 transcription regulator activity IEP Predicted GO
BP GO:1903506 regulation of nucleic acid-templated transcription IEP Predicted GO
BP GO:2000112 regulation of cellular macromolecule biosynthetic process IEP Predicted GO
BP GO:2001141 regulation of RNA biosynthetic process IEP Predicted GO
InterPro domains Description Start Stop
IPR001932 PPM-type_phosphatase_dom 313 565
No external refs found!