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  5. PSME_00041186-RA

PSME_00041186-RA


Description : (at1g12570 : 451.0) Glucose-methanol-choline (GMC) oxidoreductase family protein; FUNCTIONS IN: aldehyde-lyase activity, oxidoreductase activity, acting on CH-OH group of donors, FAD binding; INVOLVED IN: alcohol metabolic process; LOCATED IN: endomembrane system; EXPRESSED IN: 17 plant structures; EXPRESSED DURING: 9 growth stages; CONTAINS InterPro DOMAIN/s: Glucose-methanol-choline oxidoreductase, N-terminal (InterPro:IPR000172), Glucose-methanol-choline oxidoreductase (InterPro:IPR012132), Glucose-methanol-choline oxidoreductase, C-terminal (InterPro:IPR007867); BEST Arabidopsis thaliana protein match is: Glucose-methanol-choline (GMC) oxidoreductase family protein (TAIR:AT5G51950.1); Has 10555 Blast hits to 10382 proteins in 1112 species: Archae - 4; Bacteria - 3926; Metazoa - 806; Fungi - 1507; Plants - 299; Viruses - 12; Other Eukaryotes - 4001 (source: NCBI BLink). & (reliability: 884.0) & (original description: no original description)


Gene families : OG_42_0000273 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000273_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Pseudotsuga release: PSME_00041186-RA
Cluster HCCA clusters: Cluster_14

Target Alias Description ECC score Gene Family Method Actions
112603 No alias Glucose-methanol-choline (GMC) oxidoreductase family protein 0.04 Orthogroups_2024-Update
429523 No alias Glucose-methanol-choline (GMC) oxidoreductase family protein 0.03 Orthogroups_2024-Update
A4A49_18141 No alias protein hothead 0.04 Orthogroups_2024-Update
At1g73050 No alias (R)-mandelonitrile lyase-like... 0.02 Orthogroups_2024-Update
Bradi3g31630 No alias Glucose-methanol-choline (GMC) oxidoreductase family protein 0.03 Orthogroups_2024-Update
Bradi3g35310 No alias Glucose-methanol-choline (GMC) oxidoreductase family protein 0.07 Orthogroups_2024-Update
Bradi4g28870 No alias Glucose-methanol-choline (GMC) oxidoreductase family protein 0.03 Orthogroups_2024-Update
GRMZM2G166906 No alias Glucose-methanol-choline (GMC) oxidoreductase family protein 0.03 Orthogroups_2024-Update
GRMZM2G434500 No alias Glucose-methanol-choline (GMC) oxidoreductase family protein 0.02 Orthogroups_2024-Update
LOC_Os06g44540 No alias HOTHEAD precursor, putative, expressed 0.02 Orthogroups_2024-Update
LOC_Os08g31030 No alias HOTHEAD precursor, putative, expressed 0.04 Orthogroups_2024-Update
MA_101730g0010 No alias (at5g51950 : 159.0) Glucose-methanol-choline (GMC)... 0.02 Orthogroups_2024-Update
MA_10433135g0010 No alias (at1g12570 : 252.0) Glucose-methanol-choline (GMC)... 0.03 Orthogroups_2024-Update
MA_111884g0010 No alias (at1g14190 : 311.0) Glucose-methanol-choline (GMC)... 0.03 Orthogroups_2024-Update
MA_138671g0010 No alias (at5g51950 : 104.0) Glucose-methanol-choline (GMC)... 0.06 Orthogroups_2024-Update
MA_15634g0010 No alias (at5g51950 : 377.0) Glucose-methanol-choline (GMC)... 0.03 Orthogroups_2024-Update
MA_423598g0010 No alias (at1g14190 : 209.0) Glucose-methanol-choline (GMC)... 0.06 Orthogroups_2024-Update
MA_9196249g0010 No alias (at1g72970 : 113.0) Originally identified as a mutation... 0.02 Orthogroups_2024-Update
PSME_00005084-RA No alias (at1g73050 : 407.0) Glucose-methanol-choline (GMC)... 0.04 Orthogroups_2024-Update
PSME_00025174-RA No alias (at1g14190 : 453.0) Glucose-methanol-choline (GMC)... 0.02 Orthogroups_2024-Update
PSME_00025333-RA No alias (at1g14190 : 320.0) Glucose-methanol-choline (GMC)... 0.02 Orthogroups_2024-Update
PSME_00026044-RA No alias (at1g14190 : 450.0) Glucose-methanol-choline (GMC)... 0.05 Orthogroups_2024-Update
PSME_00028418-RA No alias (at1g14190 : 429.0) Glucose-methanol-choline (GMC)... 0.03 Orthogroups_2024-Update
PSME_00032064-RA No alias (at1g12570 : 349.0) Glucose-methanol-choline (GMC)... 0.03 Orthogroups_2024-Update
PSME_00032105-RA No alias (at1g14190 : 453.0) Glucose-methanol-choline (GMC)... 0.02 Orthogroups_2024-Update
PSME_00032502-RA No alias (at1g12570 : 436.0) Glucose-methanol-choline (GMC)... 0.03 Orthogroups_2024-Update
PSME_00032973-RA No alias (at1g12570 : 369.0) Glucose-methanol-choline (GMC)... 0.03 Orthogroups_2024-Update
PSME_00038869-RA No alias (at1g14190 : 353.0) Glucose-methanol-choline (GMC)... 0.02 Orthogroups_2024-Update
PSME_00039380-RA No alias (at1g12570 : 462.0) Glucose-methanol-choline (GMC)... 0.05 Orthogroups_2024-Update
PSME_00042692-RA No alias (at1g14190 : 441.0) Glucose-methanol-choline (GMC)... 0.03 Orthogroups_2024-Update
PSME_00047795-RA No alias (at1g73050 : 409.0) Glucose-methanol-choline (GMC)... 0.02 Orthogroups_2024-Update
PSME_00048296-RA No alias (at1g14190 : 439.0) Glucose-methanol-choline (GMC)... 0.03 Orthogroups_2024-Update
PSME_00049535-RA No alias (at1g14190 : 155.0) Glucose-methanol-choline (GMC)... 0.02 Orthogroups_2024-Update
PSME_00051118-RA No alias (at5g51950 : 373.0) Glucose-methanol-choline (GMC)... 0.03 Orthogroups_2024-Update
PSME_00052828-RA No alias (at1g72970 : 228.0) Originally identified as a mutation... 0.05 Orthogroups_2024-Update
PSME_00054443-RA No alias (at1g12570 : 421.0) Glucose-methanol-choline (GMC)... 0.05 Orthogroups_2024-Update
Potri.012G135400 No alias Glucose-methanol-choline (GMC) oxidoreductase family protein 0.04 Orthogroups_2024-Update
Seita.1G271600.1 No alias Unknown function 0.08 Orthogroups_2024-Update
Seita.4G191700.1 No alias Unknown function 0.03 Orthogroups_2024-Update
Sobic.001G320300.1 No alias Unknown function 0.02 Orthogroups_2024-Update
Solyc06g062600 No alias Glucose-methanol-choline (GMC) oxidoreductase family... 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0016614 oxidoreductase activity, acting on CH-OH group of donors IEA InterProScan predictions
MF GO:0050660 flavin adenine dinucleotide binding IEA InterProScan predictions
BP GO:0055114 oxidation-reduction process IEA InterProScan predictions
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR007867 GMC_OxRtase_C 403 550
IPR000172 GMC_OxRdtase_N 54 338
No external refs found!