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  5. PSME_00042474-RA

PSME_00042474-RA


Description : (at3g47110 : 591.0) Leucine-rich repeat protein kinase family protein; FUNCTIONS IN: protein serine/threonine kinase activity, kinase activity, ATP binding; INVOLVED IN: transmembrane receptor protein tyrosine kinase signaling pathway, protein amino acid phosphorylation; LOCATED IN: endomembrane system; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Protein kinase, catalytic domain (InterPro:IPR000719), Leucine-rich repeat-containing N-terminal domain, type 2 (InterPro:IPR013210), Leucine-rich repeat (InterPro:IPR001611), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: EF-TU receptor (TAIR:AT5G20480.1); Has 201898 Blast hits to 124021 proteins in 4668 species: Archae - 159; Bacteria - 19385; Metazoa - 64482; Fungi - 8819; Plants - 85595; Viruses - 264; Other Eukaryotes - 23194 (source: NCBI BLink). & (p93194|rpk1_iponi : 393.0) Receptor-like protein kinase precursor (EC 2.7.11.1) - Ipomoea nil (Japanese morning glory) (Pharbitis nil) & (reliability: 1182.0) & (original description: no original description)


Gene families : OG_42_0000007 (Orthogroups_2024-Update) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Pseudotsuga release: PSME_00042474-RA
Cluster HCCA clusters: Cluster_180

Target Alias Description ECC score Gene Family Method Actions
101476 No alias Leucine-rich repeat family protein 0.04 Orthogroups_2024-Update
120629 No alias Leucine-rich receptor-like protein kinase family protein 0.04 Orthogroups_2024-Update
128654 No alias Leucine-rich receptor-like protein kinase family protein 0.04 Orthogroups_2024-Update
A4A49_26079 No alias putative lrr receptor-like serinethreonine-protein kinase 0.02 Orthogroups_2024-Update
Bradi1g01432 No alias Leucine-rich repeat protein kinase family protein 0.03 Orthogroups_2024-Update
Bradi1g47130 No alias Leucine-rich receptor-like protein kinase family protein 0.04 Orthogroups_2024-Update
Bradi4g08210 No alias EF-TU receptor 0.03 Orthogroups_2024-Update
Bradi4g10998 No alias Leucine-rich repeat protein kinase family protein 0.03 Orthogroups_2024-Update
Bradi4g30827 No alias Leucine-rich repeat protein kinase family protein 0.03 Orthogroups_2024-Update
GRMZM2G162829 No alias Leucine-rich repeat protein kinase family protein 0.02 Orthogroups_2024-Update
Glyma.13G268100 No alias Leucine-rich repeat protein kinase family protein 0.03 Orthogroups_2024-Update
HORVU5Hr1G095120.2 No alias LRR-XII protein kinase & EC_2.7 transferase transferring... 0.03 Orthogroups_2024-Update
LOC_Os01g05960 No alias receptor kinase, putative, expressed 0.02 Orthogroups_2024-Update
LOC_Os01g33950 No alias expressed protein 0.03 Orthogroups_2024-Update
LOC_Os04g03210 No alias receptor kinase, putative, expressed 0.02 Orthogroups_2024-Update
LOC_Os06g38730 No alias receptor-like protein kinase precursor, putative, expressed 0.02 Orthogroups_2024-Update
LOC_Os11g07140 No alias receptor kinase, putative, expressed 0.02 Orthogroups_2024-Update
LOC_Os11g07260 No alias expressed protein 0.02 Orthogroups_2024-Update
LOC_Os11g29790 No alias receptor kinase, putative, expressed 0.02 Orthogroups_2024-Update
MA_10237903g0010 No alias (at3g47570 : 172.0) Leucine-rich repeat protein kinase... 0.03 Orthogroups_2024-Update
MA_13546g0010 No alias (at5g20480 : 145.0) Encodes a predicted leucine-rich... 0.04 Orthogroups_2024-Update
MA_161654g0010 No alias (at2g24130 : 293.0) Leucine-rich receptor-like protein... 0.03 Orthogroups_2024-Update
MA_266307g0020 No alias (at3g47570 : 279.0) Leucine-rich repeat protein kinase... 0.03 Orthogroups_2024-Update
MA_33397g0010 No alias (at3g47570 : 243.0) Leucine-rich repeat protein kinase... 0.03 Orthogroups_2024-Update
MA_4617178g0010 No alias no hits & (original description: no original description) 0.03 Orthogroups_2024-Update
MA_528074g0010 No alias no hits & (original description: no original description) 0.03 Orthogroups_2024-Update
MA_7910488g0010 No alias (at3g47110 : 125.0) Leucine-rich repeat protein kinase... 0.05 Orthogroups_2024-Update
MA_81952g0010 No alias (at5g46330 : 205.0) Encodes a leucine-rich repeat... 0.03 Orthogroups_2024-Update
PSME_00006646-RA No alias no hits & (original description: no original description) 0.04 Orthogroups_2024-Update
PSME_00014024-RA No alias (at2g24130 : 458.0) Leucine-rich receptor-like protein... 0.05 Orthogroups_2024-Update
PSME_00014185-RA No alias (at3g24240 : 256.0) Leucine-rich repeat receptor-like... 0.04 Orthogroups_2024-Update
PSME_00016355-RA No alias (at3g47570 : 606.0) Leucine-rich repeat protein kinase... 0.04 Orthogroups_2024-Update
PSME_00016956-RA No alias (at3g47090 : 353.0) Leucine-rich repeat protein kinase... 0.05 Orthogroups_2024-Update
PSME_00018686-RA No alias (at3g47110 : 573.0) Leucine-rich repeat protein kinase... 0.04 Orthogroups_2024-Update
PSME_00021673-RA No alias (at4g20140 : 410.0) Encodes GASSHO1 (GSO1), a putative... 0.04 Orthogroups_2024-Update
PSME_00030826-RA No alias (at2g24130 : 523.0) Leucine-rich receptor-like protein... 0.04 Orthogroups_2024-Update
PSME_00031122-RA No alias (at5g46330 : 295.0) Encodes a leucine-rich repeat... 0.04 Orthogroups_2024-Update
PSME_00031300-RA No alias (at3g47110 : 131.0) Leucine-rich repeat protein kinase... 0.03 Orthogroups_2024-Update
PSME_00035635-RA No alias (at3g47110 : 648.0) Leucine-rich repeat protein kinase... 0.05 Orthogroups_2024-Update
PSME_00039997-RA No alias (at2g24130 : 449.0) Leucine-rich receptor-like protein... 0.07 Orthogroups_2024-Update
PSME_00040390-RA No alias (at4g20140 : 445.0) Encodes GASSHO1 (GSO1), a putative... 0.03 Orthogroups_2024-Update
PSME_00040826-RA No alias (at5g63930 : 192.0) Leucine-rich repeat protein kinase... 0.05 Orthogroups_2024-Update
PSME_00041792-RA No alias (at3g47110 : 607.0) Leucine-rich repeat protein kinase... 0.04 Orthogroups_2024-Update
PSME_00044948-RA No alias (at3g47110 : 644.0) Leucine-rich repeat protein kinase... 0.04 Orthogroups_2024-Update
PSME_00049305-RA No alias (at4g20140 : 432.0) Encodes GASSHO1 (GSO1), a putative... 0.05 Orthogroups_2024-Update
PSME_00049438-RA No alias (at3g47570 : 582.0) Leucine-rich repeat protein kinase... 0.04 Orthogroups_2024-Update
PSME_00053319-RA No alias (at1g34110 : 361.0) Leucine-rich receptor-like protein... 0.06 Orthogroups_2024-Update
PSME_00055160-RA No alias (at5g46330 : 382.0) Encodes a leucine-rich repeat... 0.04 Orthogroups_2024-Update
Potri.004G065400 No alias Leucine-rich receptor-like protein kinase family protein 0.02 Orthogroups_2024-Update
Potri.008G033900 No alias Leucine-rich repeat protein kinase family protein 0.02 Orthogroups_2024-Update
Pp1s185_8V6 No alias leucine rich repeat-like protein 0.02 Orthogroups_2024-Update
Seita.1G037000.1 No alias LRR-XII protein kinase & EC_2.7 transferase transferring... 0.03 Orthogroups_2024-Update
Seita.2G093900.1 No alias EC_2.7 transferase transferring phosphorus-containing group 0.03 Orthogroups_2024-Update
Seita.4G046600.1 No alias LRR-XII protein kinase & EC_2.7 transferase transferring... 0.02 Orthogroups_2024-Update
Seita.5G105900.1 No alias EC_2.7 transferase transferring phosphorus-containing group 0.02 Orthogroups_2024-Update
Seita.5G106500.1 No alias EC_2.7 transferase transferring phosphorus-containing group 0.03 Orthogroups_2024-Update
Sobic.003G265600.1 No alias Unknown function 0.03 Orthogroups_2024-Update
Sobic.005G187700.1 No alias EC_2.7 transferase transferring phosphorus-containing group 0.04 Orthogroups_2024-Update
Sobic.008G007400.1 No alias LRR-XII protein kinase & EC_2.7 transferase transferring... 0.02 Orthogroups_2024-Update
Sobic.010G067200.2 No alias EC_2.7 transferase transferring phosphorus-containing group 0.03 Orthogroups_2024-Update
Solyc04g009040 No alias Receptor-kinase, putative (AHRD V3.3 *** B9SZK5_RICCO) 0.02 Orthogroups_2024-Update
Sopen02g010100 No alias Leucine Rich repeats (2 copies) 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0004672 protein kinase activity IEA InterProScan predictions
MF GO:0005515 protein binding IEA InterProScan predictions
MF GO:0005524 ATP binding IEA InterProScan predictions
BP GO:0006468 protein phosphorylation IEA InterProScan predictions
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Type GO Term Name Evidence Source
MF GO:0000155 phosphorelay sensor kinase activity IEP Predicted GO
MF GO:0004673 protein histidine kinase activity IEP Predicted GO
MF GO:0005244 voltage-gated ion channel activity IEP Predicted GO
MF GO:0005247 voltage-gated chloride channel activity IEP Predicted GO
MF GO:0005253 anion channel activity IEP Predicted GO
MF GO:0005254 chloride channel activity IEP Predicted GO
CC GO:0005789 endoplasmic reticulum membrane IEP Predicted GO
BP GO:0006497 protein lipidation IEP Predicted GO
BP GO:0006505 GPI anchor metabolic process IEP Predicted GO
BP GO:0006506 GPI anchor biosynthetic process IEP Predicted GO
BP GO:0006508 proteolysis IEP Predicted GO
BP GO:0006643 membrane lipid metabolic process IEP Predicted GO
BP GO:0006661 phosphatidylinositol biosynthetic process IEP Predicted GO
BP GO:0006664 glycolipid metabolic process IEP Predicted GO
BP GO:0006821 chloride transport IEP Predicted GO
MF GO:0008233 peptidase activity IEP Predicted GO
MF GO:0008234 cysteine-type peptidase activity IEP Predicted GO
MF GO:0008308 voltage-gated anion channel activity IEP Predicted GO
BP GO:0008654 phospholipid biosynthetic process IEP Predicted GO
BP GO:0009247 glycolipid biosynthetic process IEP Predicted GO
BP GO:0009314 response to radiation IEP Predicted GO
BP GO:0009416 response to light stimulus IEP Predicted GO
BP GO:0009581 detection of external stimulus IEP Predicted GO
BP GO:0009582 detection of abiotic stimulus IEP Predicted GO
BP GO:0009583 detection of light stimulus IEP Predicted GO
BP GO:0009584 detection of visible light IEP Predicted GO
BP GO:0009605 response to external stimulus IEP Predicted GO
BP GO:0009628 response to abiotic stimulus IEP Predicted GO
MF GO:0015108 chloride transmembrane transporter activity IEP Predicted GO
BP GO:0016579 protein deubiquitination IEP Predicted GO
MF GO:0016775 phosphotransferase activity, nitrogenous group as acceptor IEP Predicted GO
BP GO:0018298 protein-chromophore linkage IEP Predicted GO
MF GO:0019783 ubiquitin-like protein-specific protease activity IEP Predicted GO
MF GO:0022832 voltage-gated channel activity IEP Predicted GO
MF GO:0036459 thiol-dependent ubiquitinyl hydrolase activity IEP Predicted GO
MF GO:0043531 ADP binding IEP Predicted GO
CC GO:0044432 endoplasmic reticulum part IEP Predicted GO
BP GO:0046467 membrane lipid biosynthetic process IEP Predicted GO
BP GO:0046474 glycerophospholipid biosynthetic process IEP Predicted GO
BP GO:0051606 detection of stimulus IEP Predicted GO
MF GO:0070011 peptidase activity, acting on L-amino acid peptides IEP Predicted GO
BP GO:0070646 protein modification by small protein removal IEP Predicted GO
BP GO:0070647 protein modification by small protein conjugation or removal IEP Predicted GO
MF GO:0101005 ubiquitinyl hydrolase activity IEP Predicted GO
BP GO:1903509 liposaccharide metabolic process IEP Predicted GO
InterPro domains Description Start Stop
IPR000719 Prot_kinase_dom 717 926
IPR013210 LRR_N_plant-typ 43 82
IPR001611 Leu-rich_rpt 552 611
No external refs found!