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  5. PSME_00042578-RA

PSME_00042578-RA


Description : (at5g42610 : 209.0) Protein of unknown function (DUF607); CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF607 (InterPro:IPR006769); BEST Arabidopsis thaliana protein match is: Protein of unknown function (DUF607) (TAIR:AT2G23790.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 418.0) & (original description: no original description)


Gene families : OG_42_0000620 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000620_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Pseudotsuga release: PSME_00042578-RA
Cluster HCCA clusters: Cluster_1

Target Alias Description ECC score Gene Family Method Actions
A4A49_08809 No alias calcium uniporter protein 2, mitochondrial 0.03 Orthogroups_2024-Update
At5g66650 No alias Calcium uniporter protein 3, mitochondrial... 0.03 Orthogroups_2024-Update
Bradi4g44077 No alias Protein of unknown function (DUF607) 0.02 Orthogroups_2024-Update
Brara.F00613.1 No alias channel component *(MCU) of MCU calcium uniporter complex 0.02 Orthogroups_2024-Update
Brara.I00894.1 No alias channel component *(MCU) of MCU calcium uniporter complex 0.03 Orthogroups_2024-Update
Glyma.01G178500 No alias Protein of unknown function (DUF607) 0.04 Orthogroups_2024-Update
Glyma.02G238500 No alias Protein of unknown function (DUF607) 0.03 Orthogroups_2024-Update
Glyma.14G077100 No alias Protein of unknown function (DUF607) 0.03 Orthogroups_2024-Update
Glyma.17G248600 No alias Protein of unknown function (DUF607) 0.04 Orthogroups_2024-Update
LOC_Os03g13050 No alias E2F-related protein, putative, expressed 0.02 Orthogroups_2024-Update
MA_10435979g0030 No alias (at5g42610 : 182.0) Protein of unknown function... 0.05 Orthogroups_2024-Update
MA_74391g0010 No alias (at5g42610 : 100.0) Protein of unknown function... 0.04 Orthogroups_2024-Update
Mp6g12090.1 No alias channel component MCU of MCU calcium uniporter complex 0.04 Orthogroups_2024-Update
PSME_00055709-RA No alias (at5g42610 : 202.0) Protein of unknown function... 0.04 Orthogroups_2024-Update
Seita.9G483100.1 No alias channel component *(MCU) of MCU calcium uniporter complex 0.02 Orthogroups_2024-Update
Sopen06g034140 No alias Protein of unknown function, DUF607 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0000287 magnesium ion binding IEP Predicted GO
BP GO:0006629 lipid metabolic process IEP Predicted GO
BP GO:0006720 isoprenoid metabolic process IEP Predicted GO
BP GO:0006721 terpenoid metabolic process IEP Predicted GO
MF GO:0008171 O-methyltransferase activity IEP Predicted GO
BP GO:0008299 isoprenoid biosynthetic process IEP Predicted GO
MF GO:0008661 1-deoxy-D-xylulose-5-phosphate synthase activity IEP Predicted GO
MF GO:0010333 terpene synthase activity IEP Predicted GO
BP GO:0016114 terpenoid biosynthetic process IEP Predicted GO
MF GO:0016744 transferase activity, transferring aldehyde or ketonic groups IEP Predicted GO
MF GO:0016829 lyase activity IEP Predicted GO
MF GO:0016835 carbon-oxygen lyase activity IEP Predicted GO
MF GO:0016838 carbon-oxygen lyase activity, acting on phosphates IEP Predicted GO
MF GO:0071949 FAD binding IEP Predicted GO
InterPro domains Description Start Stop
IPR006769 MCU_C 142 295
No external refs found!