1. Home
  2. Species
  3. Pseudotsuga menziesii
  4. Sequence
  5. PSME_00042769-RA

PSME_00042769-RA


Description : no hits & (original description: no original description)


Gene families : OG_42_0000100 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000100_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Pseudotsuga release: PSME_00042769-RA
Cluster HCCA clusters: Cluster_40

Target Alias Description ECC score Gene Family Method Actions
448491 No alias Protein of unknown function (DUF581) 0.03 Orthogroups_2024-Update
At4g17670 No alias Senescence-associated family protein (DUF581)... 0.03 Orthogroups_2024-Update
Bradi5g19660 No alias Protein of unknown function (DUF581) 0.03 Orthogroups_2024-Update
Brara.A00895.1 No alias regulatory protein *(FLZ) of SnRK1 complex 0.04 Orthogroups_2024-Update
Brara.E00450.1 No alias regulatory protein *(FLZ) of SnRK1 complex 0.02 Orthogroups_2024-Update
Brara.I04153.1 No alias regulatory protein *(FLZ) of SnRK1 complex 0.02 Orthogroups_2024-Update
GRMZM2G016948 No alias Protein of unknown function (DUF581) 0.03 Orthogroups_2024-Update
Glyma.15G179800 No alias Protein of unknown function (DUF581) 0.02 Orthogroups_2024-Update
Glyma.16G013000 No alias Protein of unknown function (DUF581) 0.04 Orthogroups_2024-Update
HORVU5Hr1G063320.4 No alias regulatory protein *(FLZ) of SnRK1 complex 0.03 Orthogroups_2024-Update
LOC_Os09g26370 No alias DUF581 domain containing protein, expressed 0.04 Orthogroups_2024-Update
MA_14341g0010 No alias (at4g17670 : 82.8) Protein of unknown function (DUF581);... 0.03 Orthogroups_2024-Update
PSME_00018006-RA No alias no hits & (original description: no original description) 0.04 Orthogroups_2024-Update
PSME_00038385-RA No alias (at5g11460 : 88.6) Protein of unknown function (DUF581);... 0.05 Orthogroups_2024-Update
PSME_00043696-RA No alias (at4g17670 : 80.1) Protein of unknown function (DUF581);... 0.04 Orthogroups_2024-Update
PSME_00052700-RA No alias no hits & (original description: no original description) 0.05 Orthogroups_2024-Update
PSME_00055370-RA No alias (at3g22550 : 87.8) Protein of unknown function (DUF581);... 0.05 Orthogroups_2024-Update
Sobic.001G481100.1 No alias regulatory protein *(FLZ) of SnRK1 complex 0.02 Orthogroups_2024-Update
Sobic.004G199600.1 No alias regulatory protein *(FLZ) of SnRK1 complex 0.02 Orthogroups_2024-Update
Solyc04g072780 No alias senescence-associated family protein (DUF581) (AHRD V3.3... 0.02 Orthogroups_2024-Update
Sopen05g030380 No alias Protein of unknown function (DUF581) 0.02 Orthogroups_2024-Update
Sopen12g008660 No alias Protein of unknown function (DUF581) 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
MF GO:0004601 peroxidase activity IEP Predicted GO
MF GO:0004602 glutathione peroxidase activity IEP Predicted GO
MF GO:0005507 copper ion binding IEP Predicted GO
BP GO:0006979 response to oxidative stress IEP Predicted GO
MF GO:0008131 primary amine oxidase activity IEP Predicted GO
BP GO:0009308 amine metabolic process IEP Predicted GO
BP GO:0016197 endosomal transport IEP Predicted GO
MF GO:0016209 antioxidant activity IEP Predicted GO
BP GO:0016482 cytosolic transport IEP Predicted GO
MF GO:0016491 oxidoreductase activity IEP Predicted GO
MF GO:0016638 oxidoreductase activity, acting on the CH-NH2 group of donors IEP Predicted GO
MF GO:0016641 oxidoreductase activity, acting on the CH-NH2 group of donors, oxygen as acceptor IEP Predicted GO
MF GO:0016684 oxidoreductase activity, acting on peroxide as acceptor IEP Predicted GO
BP GO:0022618 ribonucleoprotein complex assembly IEP Predicted GO
CC GO:0030906 retromer, cargo-selective complex IEP Predicted GO
BP GO:0042147 retrograde transport, endosome to Golgi IEP Predicted GO
BP GO:0042255 ribosome assembly IEP Predicted GO
BP GO:0042256 mature ribosome assembly IEP Predicted GO
MF GO:0043021 ribonucleoprotein complex binding IEP Predicted GO
MF GO:0043022 ribosome binding IEP Predicted GO
MF GO:0044877 protein-containing complex binding IEP Predicted GO
MF GO:0046914 transition metal ion binding IEP Predicted GO
MF GO:0048037 cofactor binding IEP Predicted GO
MF GO:0048038 quinone binding IEP Predicted GO
BP GO:0070925 organelle assembly IEP Predicted GO
BP GO:0071826 ribonucleoprotein complex subunit organization IEP Predicted GO
InterPro domains Description Start Stop
IPR007650 Zf-FLZ_dom 116 163
No external refs found!