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  5. PSME_00043125-RA

PSME_00043125-RA


Description : (q41142|plda1_ricco : 184.0) Phospholipase D alpha 1 precursor (EC 3.1.4.4) (PLD 1) (Choline phosphatase 1) (Phosphatidylcholine-hydrolyzing phospholipase D 1) - Ricinus communis (Castor bean) & (at3g15730 : 179.0) Encodes phospholipase D alpha 1 (PLD alpha 1). Positive regulator of abscisic acid (ABA) mediated stomatal movements. PLD alpha 1 plays an important role in seed deterioration and aging in Arabidopsis.; phospholipase D alpha 1 (PLDALPHA1); FUNCTIONS IN: phospholipase D activity, phosphatidylinositol-4,5-bisphosphate binding; INVOLVED IN: response to cadmium ion, fatty acid metabolic process, seed germination, regulation of stomatal movement, positive regulation of abscisic acid mediated signaling pathway; LOCATED IN: in 6 components; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Phospholipase D (InterPro:IPR015679), C2 calcium/lipid-binding domain, CaLB (InterPro:IPR008973), Phospholipase D/Transphosphatidylase (InterPro:IPR001736), C2 calcium-dependent membrane targeting (InterPro:IPR000008), Phospholipase D, plant (InterPro:IPR011402); BEST Arabidopsis thaliana protein match is: phospholipase D alpha 2 (TAIR:AT1G52570.1); Has 2073 Blast hits to 1588 proteins in 412 species: Archae - 0; Bacteria - 593; Metazoa - 344; Fungi - 417; Plants - 575; Viruses - 0; Other Eukaryotes - 144 (source: NCBI BLink). & (reliability: 358.0) & (original description: no original description)


Gene families : OG_42_0000199 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000199_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Pseudotsuga release: PSME_00043125-RA
Cluster HCCA clusters: Cluster_169

Target Alias Description ECC score Gene Family Method Actions
At4g35790 No alias Phospholipase D delta [Source:UniProtKB/Swiss-Prot;Acc:Q9C5Y0] 0.03 Orthogroups_2024-Update
GRMZM2G438378 No alias phospholipase D alpha 1 0.02 Orthogroups_2024-Update
Glyma.01G215100 No alias phospholipase D beta 1 0.03 Orthogroups_2024-Update
HORVU1Hr1G082890.5 No alias phospholipase-D *(PLD-alpha) & EC_3.1 hydrolase acting... 0.03 Orthogroups_2024-Update
LOC_Os01g07760 No alias phospholipase D, putative, expressed 0.02 Orthogroups_2024-Update
MA_10436582g0010 No alias (q43270|plda1_maize : 703.0) Phospholipase D alpha 1 (EC... 0.03 Orthogroups_2024-Update
Mp2g18270.1 No alias phospholipase D (PLD-alpha) 0.04 Orthogroups_2024-Update
PSME_00012090-RA No alias (p93400|plda1_tobac : 415.0) Phospholipase D alpha 1 (EC... 0.04 Orthogroups_2024-Update
Pp1s8_170V6 No alias phospholipase d alpha 0.02 Orthogroups_2024-Update
Pp1s94_26V6 No alias phospholipase d alpha 0.02 Orthogroups_2024-Update
Seita.1G110400.1 No alias EC_3.1 hydrolase acting on ester bond 0.03 Orthogroups_2024-Update
Sobic.003G050400.1 No alias EC_3.1 hydrolase acting on ester bond & phospholipase-D... 0.03 Orthogroups_2024-Update
Sobic.008G183400.1 No alias EC_3.1 hydrolase acting on ester bond & phospholipase-D... 0.03 Orthogroups_2024-Update
Solyc01g103910 No alias Phospholipase D (AHRD V3.3 *** M0ZZP4_SOLTU) 0.03 Orthogroups_2024-Update
Solyc08g080130 No alias phospholipase PLDb1 0.03 Orthogroups_2024-Update
Sopen02g028120 No alias Phospholipase D C terminal 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0003824 catalytic activity IEA InterProScan predictions
MF GO:0016747 transferase activity, transferring acyl groups other than amino-acyl groups IEA InterProScan predictions
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Type GO Term Name Evidence Source
BP GO:0000226 microtubule cytoskeleton organization IEP Predicted GO
BP GO:0000723 telomere maintenance IEP Predicted GO
MF GO:0003678 DNA helicase activity IEP Predicted GO
MF GO:0004386 helicase activity IEP Predicted GO
MF GO:0004488 methylenetetrahydrofolate dehydrogenase (NADP+) activity IEP Predicted GO
MF GO:0004743 pyruvate kinase activity IEP Predicted GO
BP GO:0006139 nucleobase-containing compound metabolic process IEP Predicted GO
BP GO:0006281 DNA repair IEP Predicted GO
BP GO:0006950 response to stress IEP Predicted GO
BP GO:0006974 cellular response to DNA damage stimulus IEP Predicted GO
BP GO:0006996 organelle organization IEP Predicted GO
BP GO:0007010 cytoskeleton organization IEP Predicted GO
BP GO:0007017 microtubule-based process IEP Predicted GO
BP GO:0007051 spindle organization IEP Predicted GO
MF GO:0008026 ATP-dependent helicase activity IEP Predicted GO
MF GO:0016462 pyrophosphatase activity IEP Predicted GO
MF GO:0016538 cyclin-dependent protein serine/threonine kinase regulator activity IEP Predicted GO
MF GO:0016645 oxidoreductase activity, acting on the CH-NH group of donors IEP Predicted GO
MF GO:0016646 oxidoreductase activity, acting on the CH-NH group of donors, NAD or NADP as acceptor IEP Predicted GO
MF GO:0016817 hydrolase activity, acting on acid anhydrides IEP Predicted GO
MF GO:0016818 hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides IEP Predicted GO
MF GO:0017111 nucleoside-triphosphatase activity IEP Predicted GO
MF GO:0019207 kinase regulator activity IEP Predicted GO
MF GO:0019887 protein kinase regulator activity IEP Predicted GO
MF GO:0030955 potassium ion binding IEP Predicted GO
BP GO:0031023 microtubule organizing center organization IEP Predicted GO
MF GO:0031420 alkali metal ion binding IEP Predicted GO
BP GO:0032200 telomere organization IEP Predicted GO
BP GO:0033554 cellular response to stress IEP Predicted GO
BP GO:0051225 spindle assembly IEP Predicted GO
BP GO:0051716 cellular response to stimulus IEP Predicted GO
BP GO:0060249 anatomical structure homeostasis IEP Predicted GO
MF GO:0070035 purine NTP-dependent helicase activity IEP Predicted GO
BP GO:0070925 organelle assembly IEP Predicted GO
InterPro domains Description Start Stop
IPR001736 PLipase_D/transphosphatidylase 343 370
IPR003480 Transferase 251 309
IPR003480 Transferase 32 194
IPR024632 PLipase_D_C 424 492
No external refs found!