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  5. PSME_00043324-RA

PSME_00043324-RA


Description : (at1g70520 : 207.0) Encodes a cysteine-rich receptor-like protein kinase.; cysteine-rich RLK (RECEPTOR-like protein kinase) 2 (CRK2); FUNCTIONS IN: kinase activity; INVOLVED IN: response to ozone; LOCATED IN: plasma membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Protein kinase, catalytic domain (InterPro:IPR000719), Protein of unknown function DUF26 (InterPro:IPR002902), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: cysteine-rich RLK (RECEPTOR-like protein kinase) 42 (TAIR:AT5G40380.1); Has 123193 Blast hits to 121713 proteins in 4855 species: Archae - 110; Bacteria - 13886; Metazoa - 45515; Fungi - 10581; Plants - 34413; Viruses - 473; Other Eukaryotes - 18215 (source: NCBI BLink). & (q8lkz1|nork_pea : 124.0) Nodulation receptor kinase precursor (EC 2.7.11.1) - Pisum sativum (Garden pea) & (reliability: 392.0) & (original description: no original description)


Gene families : OG_42_0000508 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000508_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Pseudotsuga release: PSME_00043324-RA
Cluster HCCA clusters: Cluster_14

Target Alias Description ECC score Gene Family Method Actions
Glyma.01G028100 No alias cysteine-rich RLK (RECEPTOR-like protein kinase) 2 0.03 Orthogroups_2024-Update
Glyma.05G005100 No alias cysteine-rich RLK (RECEPTOR-like protein kinase) 42 0.03 Orthogroups_2024-Update
MA_10425981g0010 No alias (at3g22060 : 102.0) contains Pfam profile: PF01657... 0.03 Orthogroups_2024-Update
PSME_00000827-RA No alias (at5g40380 : 313.0) Encodes a cysteine-rich... 0.04 Orthogroups_2024-Update
PSME_00022074-RA No alias (at1g70520 : 197.0) Encodes a cysteine-rich... 0.03 Orthogroups_2024-Update
PSME_00025014-RA No alias (at5g40380 : 411.0) Encodes a cysteine-rich... 0.04 Orthogroups_2024-Update
PSME_00027086-RA No alias (at1g70520 : 369.0) Encodes a cysteine-rich... 0.05 Orthogroups_2024-Update
PSME_00040044-RA No alias (at1g70520 : 377.0) Encodes a cysteine-rich... 0.04 Orthogroups_2024-Update
Solyc01g007960 No alias Kinase family protein (AHRD V3.3 *** B9HTV7_POPTR) 0.05 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0004672 protein kinase activity IEA InterProScan predictions
MF GO:0005524 ATP binding IEA InterProScan predictions
BP GO:0006468 protein phosphorylation IEA InterProScan predictions
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Type GO Term Name Evidence Source
MF GO:0004421 hydroxymethylglutaryl-CoA synthase activity IEP Predicted GO
MF GO:0004602 glutathione peroxidase activity IEP Predicted GO
BP GO:0006298 mismatch repair IEP Predicted GO
BP GO:0006720 isoprenoid metabolic process IEP Predicted GO
BP GO:0008299 isoprenoid biosynthetic process IEP Predicted GO
BP GO:0016579 protein deubiquitination IEP Predicted GO
MF GO:0016746 transferase activity, transferring acyl groups IEP Predicted GO
MF GO:0016747 transferase activity, transferring acyl groups other than amino-acyl groups IEP Predicted GO
MF GO:0030983 mismatched DNA binding IEP Predicted GO
MF GO:0046912 transferase activity, transferring acyl groups, acyl groups converted into alkyl on transfer IEP Predicted GO
BP GO:0070646 protein modification by small protein removal IEP Predicted GO
InterPro domains Description Start Stop
IPR002902 GNK2 239 314
IPR002902 GNK2 121 209
IPR000719 Prot_kinase_dom 404 570
No external refs found!