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  5. PSME_00043344-RA

PSME_00043344-RA


Description : (at3g54140 : 493.0) Encodes a di- and tri-peptide transporter that recognizes a variety of different amino acid combinations. GFP-tagged PTR1 localizes to the plasma membrane and has 8 to 11 predicted transmembrane domains. PTR1 is expressed in a number of different vascular tissues throughout the plant based on promoter:GUS expression analysis. ptr1 mutants have a lower dry weight than wild type plants when both are grown with Pro-Ala or Ala-Ala dipeptides as their nitrogen source, suggesting that PTR1 plays a role in dipeptide uptake in the roots. Furthermore N content of ptr1 mutants is lower than that of wild type plants when grown with Pro-Ala or a mixture of dipeptides as nitrogen source; peptide transporter 1 (PTR1); FUNCTIONS IN: dipeptide transporter activity, tripeptide transporter activity, transporter activity; INVOLVED IN: dipeptide transport, oligopeptide transport, nitrogen compound metabolic process, tripeptide transport; LOCATED IN: plasma membrane, membrane; EXPRESSED IN: 40 plant structures; EXPRESSED DURING: 10 growth stages; CONTAINS InterPro DOMAIN/s: PTR2 family proton/oligopeptide symporter, conserved site (InterPro:IPR018456), Oligopeptide transporter (InterPro:IPR000109), Major facilitator superfamily, general substrate transporter (InterPro:IPR016196); BEST Arabidopsis thaliana protein match is: peptide transporter 5 (TAIR:AT5G01180.1); Has 8339 Blast hits to 7886 proteins in 1502 species: Archae - 0; Bacteria - 4164; Metazoa - 798; Fungi - 498; Plants - 2234; Viruses - 0; Other Eukaryotes - 645 (source: NCBI BLink). & (reliability: 942.0) & (original description: no original description)


Gene families : OG_42_0000015 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000015_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Pseudotsuga release: PSME_00043344-RA
Cluster HCCA clusters: Cluster_10

Target Alias Description ECC score Gene Family Method Actions
411211 No alias Major facilitator superfamily protein 0.02 Orthogroups_2024-Update
A4A49_21916 No alias protein nrt1 ptr family 6.4 0.04 Orthogroups_2024-Update
A4A49_37441 No alias protein nrt1 ptr family 6.3 0.03 Orthogroups_2024-Update
At1g72120 No alias Protein NRT1/ PTR FAMILY 5.14... 0.02 Orthogroups_2024-Update
Bradi1g25460 No alias Major facilitator superfamily protein 0.03 Orthogroups_2024-Update
Bradi1g34610 No alias peptide transporter 2 0.02 Orthogroups_2024-Update
Bradi2g02822 No alias peptide transporter 5 0.03 Orthogroups_2024-Update
Bradi3g16670 No alias nitrate transporter 1.1 0.03 Orthogroups_2024-Update
Bradi3g47010 No alias Major facilitator superfamily protein 0.03 Orthogroups_2024-Update
Bradi5g20300 No alias Major facilitator superfamily protein 0.02 Orthogroups_2024-Update
Brara.E00170.1 No alias anion transporter *(NRT1/PTR) 0.04 Orthogroups_2024-Update
Brara.G01613.1 No alias anion transporter *(NRT1/PTR) 0.03 Orthogroups_2024-Update
Brara.G02370.1 No alias anion transporter *(NRT1/PTR) 0.02 Orthogroups_2024-Update
Brara.J02933.1 No alias anion transporter *(NRT1/PTR) 0.03 Orthogroups_2024-Update
GRMZM2G012434 No alias peptide transporter 2 0.03 Orthogroups_2024-Update
Glyma.11G031500 No alias nitrate transporter 1.1 0.03 Orthogroups_2024-Update
Glyma.11G224233 No alias Major facilitator superfamily protein 0.03 Orthogroups_2024-Update
Glyma.11G224266 No alias Major facilitator superfamily protein 0.04 Orthogroups_2024-Update
Glyma.11G224400 No alias Major facilitator superfamily protein 0.02 Orthogroups_2024-Update
Glyma.13G167700 No alias Major facilitator superfamily protein 0.03 Orthogroups_2024-Update
Glyma.14G191300 No alias peptide transporter 1 0.02 Orthogroups_2024-Update
HORVU1Hr1G039720.2 No alias anion transporter *(NRT1/PTR) 0.03 Orthogroups_2024-Update
HORVU4Hr1G064870.23 No alias anion transporter *(NRT1/PTR) 0.03 Orthogroups_2024-Update
Kfl00057_0100 kfl00057_0100_v1.... (at5g01180 : 590.0) Encodes a dipeptide transporter... 0.01 Orthogroups_2024-Update
LOC_Os03g13250 No alias peptide transporter PTR2, putative, expressed 0.02 Orthogroups_2024-Update
LOC_Os04g50950 No alias peptide transporter PTR2, putative, expressed 0.05 Orthogroups_2024-Update
LOC_Os05g27010 No alias peptide transporter PTR3-A, putative, expressed 0.02 Orthogroups_2024-Update
MA_186200g0010 No alias (at5g46040 : 355.0) Major facilitator superfamily... 0.03 Orthogroups_2024-Update
PSME_00017195-RA No alias (at3g54140 : 821.0) Encodes a di- and tri-peptide... 0.04 Orthogroups_2024-Update
PSME_00047265-RA No alias (at2g26690 : 637.0) Major facilitator superfamily... 0.04 Orthogroups_2024-Update
Potri.003G088800 No alias nitrate transporter 1.5 0.02 Orthogroups_2024-Update
Potri.008G061100 No alias Major facilitator superfamily protein 0.03 Orthogroups_2024-Update
Potri.016G103500 No alias Major facilitator superfamily protein 0.05 Orthogroups_2024-Update
Pp1s114_7V6 No alias peptide transporter 0.03 Orthogroups_2024-Update
Pp1s173_71V6 No alias peptide transport-like protein 0.03 Orthogroups_2024-Update
Seita.5G098500.1 No alias anion transporter *(NRT1/PTR) 0.04 Orthogroups_2024-Update
Seita.7G221900.1 No alias anion transporter *(NRT1/PTR) 0.04 Orthogroups_2024-Update
Seita.9G297900.1 No alias anion transporter *(NRT1/PTR) 0.03 Orthogroups_2024-Update
Sobic.004G193000.1 No alias anion transporter *(NRT1/PTR) 0.02 Orthogroups_2024-Update
Solyc06g050900 No alias Major facilitator superfamily protein (AHRD V3.3 *** AT2G40460.1) 0.03 Orthogroups_2024-Update
Solyc08g077170 No alias Peptide transporter, putative (AHRD V3.3 *** B9S1I2_RICCO) 0.03 Orthogroups_2024-Update
Solyc10g084950 No alias Major facilitator superfamily protein (AHRD V3.3 *** AT2G37900.1) 0.04 Orthogroups_2024-Update
Sopen02g002840 No alias POT family 0.02 Orthogroups_2024-Update
Sopen12g002020 No alias POT family 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source
CC GO:0016020 membrane IEA InterProScan predictions
MF GO:0022857 transmembrane transporter activity IEA InterProScan predictions
BP GO:0055085 transmembrane transport IEA InterProScan predictions
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Type GO Term Name Evidence Source
BP GO:0000271 polysaccharide biosynthetic process IEP Predicted GO
MF GO:0003824 catalytic activity IEP Predicted GO
MF GO:0004553 hydrolase activity, hydrolyzing O-glycosyl compounds IEP Predicted GO
MF GO:0004568 chitinase activity IEP Predicted GO
MF GO:0004748 ribonucleoside-diphosphate reductase activity, thioredoxin disulfide as acceptor IEP Predicted GO
MF GO:0005506 iron ion binding IEP Predicted GO
MF GO:0005507 copper ion binding IEP Predicted GO
BP GO:0005975 carbohydrate metabolic process IEP Predicted GO
BP GO:0005976 polysaccharide metabolic process IEP Predicted GO
BP GO:0005984 disaccharide metabolic process IEP Predicted GO
BP GO:0005985 sucrose metabolic process IEP Predicted GO
BP GO:0006022 aminoglycan metabolic process IEP Predicted GO
BP GO:0006026 aminoglycan catabolic process IEP Predicted GO
BP GO:0006030 chitin metabolic process IEP Predicted GO
BP GO:0006032 chitin catabolic process IEP Predicted GO
BP GO:0006040 amino sugar metabolic process IEP Predicted GO
BP GO:0006073 cellular glucan metabolic process IEP Predicted GO
MF GO:0008061 chitin binding IEP Predicted GO
MF GO:0008146 sulfotransferase activity IEP Predicted GO
BP GO:0008152 metabolic process IEP Predicted GO
MF GO:0008194 UDP-glycosyltransferase activity IEP Predicted GO
MF GO:0008234 cysteine-type peptidase activity IEP Predicted GO
BP GO:0009056 catabolic process IEP Predicted GO
BP GO:0009057 macromolecule catabolic process IEP Predicted GO
BP GO:0009058 biosynthetic process IEP Predicted GO
BP GO:0009059 macromolecule biosynthetic process IEP Predicted GO
BP GO:0009250 glucan biosynthetic process IEP Predicted GO
BP GO:0009311 oligosaccharide metabolic process IEP Predicted GO
BP GO:0010215 cellulose microfibril organization IEP Predicted GO
BP GO:0016049 cell growth IEP Predicted GO
BP GO:0016051 carbohydrate biosynthetic process IEP Predicted GO
MF GO:0016157 sucrose synthase activity IEP Predicted GO
MF GO:0016491 oxidoreductase activity IEP Predicted GO
MF GO:0016705 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen IEP Predicted GO
MF GO:0016725 oxidoreductase activity, acting on CH or CH2 groups IEP Predicted GO
MF GO:0016728 oxidoreductase activity, acting on CH or CH2 groups, disulfide as acceptor IEP Predicted GO
MF GO:0016757 transferase activity, transferring glycosyl groups IEP Predicted GO
MF GO:0016758 transferase activity, transferring hexosyl groups IEP Predicted GO
MF GO:0016759 cellulose synthase activity IEP Predicted GO
MF GO:0016760 cellulose synthase (UDP-forming) activity IEP Predicted GO
MF GO:0016779 nucleotidyltransferase activity IEP Predicted GO
MF GO:0016782 transferase activity, transferring sulfur-containing groups IEP Predicted GO
MF GO:0016787 hydrolase activity IEP Predicted GO
MF GO:0016798 hydrolase activity, acting on glycosyl bonds IEP Predicted GO
BP GO:0016998 cell wall macromolecule catabolic process IEP Predicted GO
BP GO:0017144 drug metabolic process IEP Predicted GO
MF GO:0020037 heme binding IEP Predicted GO
BP GO:0030198 extracellular matrix organization IEP Predicted GO
BP GO:0030243 cellulose metabolic process IEP Predicted GO
BP GO:0030244 cellulose biosynthetic process IEP Predicted GO
CC GO:0031225 anchored component of membrane IEP Predicted GO
BP GO:0033692 cellular polysaccharide biosynthetic process IEP Predicted GO
BP GO:0034637 cellular carbohydrate biosynthetic process IEP Predicted GO
BP GO:0034645 cellular macromolecule biosynthetic process IEP Predicted GO
MF GO:0035251 UDP-glucosyltransferase activity IEP Predicted GO
BP GO:0040007 growth IEP Predicted GO
BP GO:0042737 drug catabolic process IEP Predicted GO
BP GO:0043062 extracellular structure organization IEP Predicted GO
MF GO:0043169 cation binding IEP Predicted GO
BP GO:0044036 cell wall macromolecule metabolic process IEP Predicted GO
BP GO:0044042 glucan metabolic process IEP Predicted GO
BP GO:0044248 cellular catabolic process IEP Predicted GO
BP GO:0044262 cellular carbohydrate metabolic process IEP Predicted GO
BP GO:0044264 cellular polysaccharide metabolic process IEP Predicted GO
BP GO:0046348 amino sugar catabolic process IEP Predicted GO
MF GO:0046527 glucosyltransferase activity IEP Predicted GO
MF GO:0046872 metal ion binding IEP Predicted GO
MF GO:0046906 tetrapyrrole binding IEP Predicted GO
MF GO:0046914 transition metal ion binding IEP Predicted GO
MF GO:0048037 cofactor binding IEP Predicted GO
BP GO:0051273 beta-glucan metabolic process IEP Predicted GO
BP GO:0051274 beta-glucan biosynthetic process IEP Predicted GO
BP GO:0055114 oxidation-reduction process IEP Predicted GO
MF GO:0061731 ribonucleoside-diphosphate reductase activity IEP Predicted GO
BP GO:0071704 organic substance metabolic process IEP Predicted GO
BP GO:1901071 glucosamine-containing compound metabolic process IEP Predicted GO
BP GO:1901072 glucosamine-containing compound catabolic process IEP Predicted GO
BP GO:1901135 carbohydrate derivative metabolic process IEP Predicted GO
BP GO:1901136 carbohydrate derivative catabolic process IEP Predicted GO
BP GO:1901565 organonitrogen compound catabolic process IEP Predicted GO
BP GO:1901575 organic substance catabolic process IEP Predicted GO
InterPro domains Description Start Stop
IPR000109 POT_fam 130 577
No external refs found!