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  5. PSME_00043402-RA

PSME_00043402-RA


Description : (at2g23790 : 204.0) Protein of unknown function (DUF607); CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF607 (InterPro:IPR006769); BEST Arabidopsis thaliana protein match is: Protein of unknown function (DUF607) (TAIR:AT4G36820.1); Has 364 Blast hits to 364 proteins in 117 species: Archae - 0; Bacteria - 0; Metazoa - 147; Fungi - 45; Plants - 131; Viruses - 0; Other Eukaryotes - 41 (source: NCBI BLink). & (reliability: 408.0) & (original description: no original description)


Gene families : OG_42_0000620 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000620_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Pseudotsuga release: PSME_00043402-RA
Cluster HCCA clusters: Cluster_89

Target Alias Description ECC score Gene Family Method Actions
LOC_Os03g13050 No alias E2F-related protein, putative, expressed 0.02 Orthogroups_2024-Update
MA_16420g0020 No alias (at5g66650 : 166.0) Protein of unknown function... 0.03 Orthogroups_2024-Update
MA_92285g0010 No alias (at5g66650 : 170.0) Protein of unknown function... 0.03 Orthogroups_2024-Update
Seita.9G483100.1 No alias channel component *(MCU) of MCU calcium uniporter complex 0.03 Orthogroups_2024-Update
Sobic.001G203200.1 No alias channel component *(MCU) of MCU calcium uniporter complex 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0000272 polysaccharide catabolic process IEP Predicted GO
BP GO:0006629 lipid metabolic process IEP Predicted GO
BP GO:0006631 fatty acid metabolic process IEP Predicted GO
BP GO:0006633 fatty acid biosynthetic process IEP Predicted GO
BP GO:0006720 isoprenoid metabolic process IEP Predicted GO
BP GO:0006721 terpenoid metabolic process IEP Predicted GO
BP GO:0008299 isoprenoid biosynthetic process IEP Predicted GO
BP GO:0008610 lipid biosynthetic process IEP Predicted GO
MF GO:0008661 1-deoxy-D-xylulose-5-phosphate synthase activity IEP Predicted GO
BP GO:0016114 terpenoid biosynthetic process IEP Predicted GO
MF GO:0016160 amylase activity IEP Predicted GO
MF GO:0016161 beta-amylase activity IEP Predicted GO
MF GO:0016701 oxidoreductase activity, acting on single donors with incorporation of molecular oxygen IEP Predicted GO
MF GO:0016702 oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen IEP Predicted GO
MF GO:0016740 transferase activity IEP Predicted GO
MF GO:0016744 transferase activity, transferring aldehyde or ketonic groups IEP Predicted GO
MF GO:0016765 transferase activity, transferring alkyl or aryl (other than methyl) groups IEP Predicted GO
MF GO:0016790 thiolester hydrolase activity IEP Predicted GO
BP GO:0044255 cellular lipid metabolic process IEP Predicted GO
MF GO:0051213 dioxygenase activity IEP Predicted GO
InterPro domains Description Start Stop
IPR006769 MCU_C 132 284
No external refs found!