1. Home
  2. Species
  3. Pseudotsuga menziesii
  4. Sequence
  5. PSME_00043488-RA

PSME_00043488-RA


Description : (at2g24130 : 332.0) Leucine-rich receptor-like protein kinase family protein; FUNCTIONS IN: protein serine/threonine kinase activity, protein kinase activity, ATP binding; INVOLVED IN: transmembrane receptor protein tyrosine kinase signaling pathway, protein amino acid phosphorylation; LOCATED IN: endomembrane system; EXPRESSED IN: 15 plant structures; EXPRESSED DURING: 7 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Protein kinase, catalytic domain (InterPro:IPR000719), Leucine-rich repeat-containing N-terminal domain, type 2 (InterPro:IPR013210), Leucine-rich repeat (InterPro:IPR001611), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: Leucine-rich repeat protein kinase family protein (TAIR:AT3G47570.1); Has 211952 Blast hits to 136025 proteins in 5092 species: Archae - 179; Bacteria - 23123; Metazoa - 70875; Fungi - 10647; Plants - 82602; Viruses - 325; Other Eukaryotes - 24201 (source: NCBI BLink). & (q8lpb4|pskr_dauca : 232.0) Phytosulfokine receptor precursor (EC 2.7.11.1) (Phytosulfokine LRR receptor kinase) - Daucus carota (Carrot) & (reliability: 664.0) & (original description: no original description)


Gene families : OG_42_0000007 (Orthogroups_2024-Update) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Pseudotsuga release: PSME_00043488-RA
Cluster HCCA clusters: Cluster_40

Target Alias Description ECC score Gene Family Method Actions
128654 No alias Leucine-rich receptor-like protein kinase family protein 0.02 Orthogroups_2024-Update
At1g34290 No alias Receptor-like protein 5 [Source:UniProtKB/Swiss-Prot;Acc:Q9XID2] 0.02 Orthogroups_2024-Update
Bradi1g47130 No alias Leucine-rich receptor-like protein kinase family protein 0.03 Orthogroups_2024-Update
Brara.I03856.1 No alias LRR-XI protein kinase 0.02 Orthogroups_2024-Update
GRMZM2G073884 No alias Leucine-rich repeat protein kinase family protein 0.02 Orthogroups_2024-Update
GRMZM2G162829 No alias Leucine-rich repeat protein kinase family protein 0.03 Orthogroups_2024-Update
Glyma.05G126400 No alias Leucine-rich repeat transmembrane protein kinase 0.02 Orthogroups_2024-Update
Glyma.07G155800 No alias Leucine-rich repeat protein kinase family protein 0.03 Orthogroups_2024-Update
Glyma.09G216400 No alias Leucine-rich repeat protein kinase family protein 0.02 Orthogroups_2024-Update
Glyma.09G217500 No alias Leucine-rich repeat protein kinase family protein 0.03 Orthogroups_2024-Update
Glyma.18G199200 No alias Leucine-rich repeat protein kinase family protein 0.04 Orthogroups_2024-Update
LOC_Os01g05870 No alias receptor kinase, putative, expressed 0.02 Orthogroups_2024-Update
LOC_Os01g05960 No alias receptor kinase, putative, expressed 0.03 Orthogroups_2024-Update
LOC_Os02g12040 No alias receptor-like protein kinase precursor, putative, expressed 0.02 Orthogroups_2024-Update
LOC_Os06g38930 No alias leucine-rich repeat receptor protein kinase EXS... 0.02 Orthogroups_2024-Update
LOC_Os11g07140 No alias receptor kinase, putative, expressed 0.03 Orthogroups_2024-Update
LOC_Os11g07180 No alias receptor protein kinase CLAVATA1 precursor, putative, expressed 0.02 Orthogroups_2024-Update
LOC_Os11g10310 No alias receptor-like protein kinase 2 precursor, putative, expressed 0.02 Orthogroups_2024-Update
LOC_Os11g36140 No alias receptor-like protein kinase 2 precursor, putative, expressed 0.02 Orthogroups_2024-Update
MA_10430058g0010 No alias (at3g11080 : 114.0) receptor like protein 35 (RLP35);... 0.05 Orthogroups_2024-Update
MA_10432906g0020 No alias (at5g46330 : 129.0) Encodes a leucine-rich repeat... 0.03 Orthogroups_2024-Update
MA_10436682g0010 No alias (at5g20480 : 139.0) Encodes a predicted leucine-rich... 0.03 Orthogroups_2024-Update
MA_150750g0010 No alias (at3g47110 : 429.0) Leucine-rich repeat protein kinase... 0.04 Orthogroups_2024-Update
MA_159836g0010 No alias (at2g24130 : 563.0) Leucine-rich receptor-like protein... 0.03 Orthogroups_2024-Update
MA_173608g0010 No alias no hits & (original description: no original description) 0.03 Orthogroups_2024-Update
MA_180135g0010 No alias (at3g47580 : 92.0) Leucine-rich repeat protein kinase... 0.03 Orthogroups_2024-Update
MA_266307g0020 No alias (at3g47570 : 279.0) Leucine-rich repeat protein kinase... 0.03 Orthogroups_2024-Update
MA_723275g0010 No alias no hits & (original description: no original description) 0.03 Orthogroups_2024-Update
Mp7g19460.1 No alias Probable leucine-rich repeat receptor-like protein... 0.01 Orthogroups_2024-Update
PSME_00016355-RA No alias (at3g47570 : 606.0) Leucine-rich repeat protein kinase... 0.03 Orthogroups_2024-Update
PSME_00016740-RA No alias (at4g20140 : 524.0) Encodes GASSHO1 (GSO1), a putative... 0.04 Orthogroups_2024-Update
PSME_00024176-RA No alias (at4g20140 : 447.0) Encodes GASSHO1 (GSO1), a putative... 0.06 Orthogroups_2024-Update
PSME_00025380-RA No alias (at3g24240 : 244.0) Leucine-rich repeat receptor-like... 0.06 Orthogroups_2024-Update
PSME_00031122-RA No alias (at5g46330 : 295.0) Encodes a leucine-rich repeat... 0.04 Orthogroups_2024-Update
PSME_00032479-RA No alias (at3g47110 : 608.0) Leucine-rich repeat protein kinase... 0.02 Orthogroups_2024-Update
PSME_00038472-RA No alias (at5g46330 : 359.0) Encodes a leucine-rich repeat... 0.06 Orthogroups_2024-Update
PSME_00053316-RA No alias (at2g24130 : 617.0) Leucine-rich receptor-like protein... 0.05 Orthogroups_2024-Update
PSME_00055726-RA No alias (at3g47090 : 585.0) Leucine-rich repeat protein kinase... 0.03 Orthogroups_2024-Update
PSME_00056074-RA No alias (at5g07280 : 194.0) Encodes EMS1 (EXCESS... 0.04 Orthogroups_2024-Update
Potri.005G037400 No alias Leucine-rich repeat protein kinase family protein 0.04 Orthogroups_2024-Update
Potri.006G181200 No alias Leucine-rich receptor-like protein kinase family protein 0.03 Orthogroups_2024-Update
Pp1s93_45V6 No alias leucine-rich repeat receptor protein kinase exs 0.02 Orthogroups_2024-Update
Seita.2G093900.1 No alias EC_2.7 transferase transferring phosphorus-containing group 0.03 Orthogroups_2024-Update
Seita.2G209400.1 No alias LRR-XII protein kinase & EC_2.7 transferase transferring... 0.01 Orthogroups_2024-Update
Seita.3G396700.1 No alias LRR-XII protein kinase & EC_2.7 transferase transferring... 0.02 Orthogroups_2024-Update
Seita.4G230600.1 No alias LRR-XII protein kinase & EC_2.7 transferase transferring... 0.03 Orthogroups_2024-Update
Seita.4G231800.1 No alias LRR-XII protein kinase & EC_2.7 transferase transferring... 0.03 Orthogroups_2024-Update
Seita.5G105200.1 No alias EC_2.7 transferase transferring phosphorus-containing group 0.03 Orthogroups_2024-Update
Seita.5G105900.1 No alias EC_2.7 transferase transferring phosphorus-containing group 0.02 Orthogroups_2024-Update
Seita.5G106400.1 No alias Unknown function 0.03 Orthogroups_2024-Update
Seita.5G106800.1 No alias EC_2.7 transferase transferring phosphorus-containing group 0.02 Orthogroups_2024-Update
Seita.6G035000.1 No alias EC_2.7 transferase transferring phosphorus-containing group 0.03 Orthogroups_2024-Update
Seita.8G022400.1 No alias EC_2.7 transferase transferring phosphorus-containing group 0.02 Orthogroups_2024-Update
Seita.8G037400.1 No alias EC_2.7 transferase transferring phosphorus-containing group 0.03 Orthogroups_2024-Update
Seita.8G051800.1 No alias LRR-XII protein kinase & EC_2.7 transferase transferring... 0.02 Orthogroups_2024-Update
Sobic.002G075000.1 No alias EC_2.7 transferase transferring phosphorus-containing group 0.03 Orthogroups_2024-Update
Sobic.004G217500.1 No alias EC_2.7 transferase transferring phosphorus-containing group 0.03 Orthogroups_2024-Update
Sobic.004G288200.1 No alias LRR-XII protein kinase & EC_2.7 transferase transferring... 0.02 Orthogroups_2024-Update
Sobic.005G057700.1 No alias LRR-XII protein kinase & EC_2.7 transferase transferring... 0.03 Orthogroups_2024-Update
Sobic.005G065000.1 No alias LRR-XII protein kinase & EC_2.7 transferase transferring... 0.02 Orthogroups_2024-Update
Sobic.005G131600.2 No alias EC_2.7 transferase transferring phosphorus-containing group 0.04 Orthogroups_2024-Update
Sobic.005G205300.1 No alias LRR-XII protein kinase & EC_2.7 transferase transferring... 0.04 Orthogroups_2024-Update
Sobic.008G007400.1 No alias LRR-XII protein kinase & EC_2.7 transferase transferring... 0.03 Orthogroups_2024-Update
Sobic.008G065200.3 No alias EC_2.7 transferase transferring phosphorus-containing group 0.04 Orthogroups_2024-Update
Sobic.010G067400.1 No alias LRR-XII protein kinase & EC_2.7 transferase transferring... 0.02 Orthogroups_2024-Update
Sobic.010G176700.1 No alias LRR-XII protein kinase & EC_2.7 transferase transferring... 0.04 Orthogroups_2024-Update
Solyc02g070890 No alias Ontology_term=GO:0004675 0.02 Orthogroups_2024-Update
Solyc02g072470 No alias LRR receptor-like kinase (AHRD V3.3 *** A0A072V4N4_MEDTR) 0.02 Orthogroups_2024-Update
Solyc02g072480 No alias LRR receptor-like kinase (AHRD V3.3 *** A0A072V4N4_MEDTR) 0.03 Orthogroups_2024-Update
Solyc03g118330 No alias Receptor-kinase, putative (AHRD V3.3 *-* B9RVA8_RICCO) 0.03 Orthogroups_2024-Update
Solyc04g014200 No alias LOW QUALITY:Non-specific serine/threonine protein kinase... 0.03 Orthogroups_2024-Update
Solyc06g006020 No alias Non-specific serine/threonine protein kinase (AHRD V3.3... 0.02 Orthogroups_2024-Update
Solyc06g006030 No alias Receptor-like kinase (AHRD V3.3 *-* A0A072TRW0_MEDTR) 0.03 Orthogroups_2024-Update
Sopen02g021350 No alias Leucine Rich repeats (2 copies) 0.03 Orthogroups_2024-Update
Sopen06g002020 No alias Leucine rich repeat 0.02 Orthogroups_2024-Update
Sopen06g033300 No alias Leucine Rich repeats (2 copies) 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0004672 protein kinase activity IEA InterProScan predictions
MF GO:0005524 ATP binding IEA InterProScan predictions
BP GO:0006468 protein phosphorylation IEA InterProScan predictions
Toggle parental
Type GO Term Name Evidence Source
BP GO:0003352 regulation of cilium movement IEP Predicted GO
MF GO:0003723 RNA binding IEP Predicted GO
MF GO:0004252 serine-type endopeptidase activity IEP Predicted GO
MF GO:0004474 malate synthase activity IEP Predicted GO
CC GO:0005741 mitochondrial outer membrane IEP Predicted GO
BP GO:0006081 cellular aldehyde metabolic process IEP Predicted GO
BP GO:0006097 glyoxylate cycle IEP Predicted GO
MF GO:0008135 translation factor activity, RNA binding IEP Predicted GO
BP GO:0009605 response to external stimulus IEP Predicted GO
BP GO:0009607 response to biotic stimulus IEP Predicted GO
BP GO:0009617 response to bacterium IEP Predicted GO
BP GO:0009620 response to fungus IEP Predicted GO
BP GO:0016192 vesicle-mediated transport IEP Predicted GO
BP GO:0016197 endosomal transport IEP Predicted GO
BP GO:0016482 cytosolic transport IEP Predicted GO
MF GO:0016758 transferase activity, transferring hexosyl groups IEP Predicted GO
CC GO:0030906 retromer, cargo-selective complex IEP Predicted GO
CC GO:0031968 organelle outer membrane IEP Predicted GO
BP GO:0032879 regulation of localization IEP Predicted GO
BP GO:0032886 regulation of microtubule-based process IEP Predicted GO
BP GO:0042147 retrograde transport, endosome to Golgi IEP Predicted GO
BP GO:0042742 defense response to bacterium IEP Predicted GO
BP GO:0043207 response to external biotic stimulus IEP Predicted GO
BP GO:0046487 glyoxylate metabolic process IEP Predicted GO
MF GO:0046912 transferase activity, transferring acyl groups, acyl groups converted into alkyl on transfer IEP Predicted GO
BP GO:0050832 defense response to fungus IEP Predicted GO
BP GO:0051270 regulation of cellular component movement IEP Predicted GO
BP GO:0051704 multi-organism process IEP Predicted GO
BP GO:0051707 response to other organism IEP Predicted GO
BP GO:0060632 regulation of microtubule-based movement IEP Predicted GO
BP GO:0098542 defense response to other organism IEP Predicted GO
CC GO:0098805 whole membrane IEP Predicted GO
InterPro domains Description Start Stop
IPR000719 Prot_kinase_dom 228 434
No external refs found!