PSME_00043733-RA

Description : (at2g30590 : 156.0) Encodes WRKY DNA-binding protein 21 (WRKY21).; WRKY DNA-binding protein 21 (WRKY21); FUNCTIONS IN: calmodulin binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription, DNA-dependent, regulation of transcription; LOCATED IN: nucleus; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: DNA-binding WRKY (InterPro:IPR003657), Transcription factor, WRKY, Zn-cluster (InterPro:IPR018872); BEST Arabidopsis thaliana protein match is: WRKY DNA-binding protein 74 (TAIR:AT5G28650.1); Has 39192 Blast hits to 15053 proteins in 688 species: Archae - 6; Bacteria - 1092; Metazoa - 13773; Fungi - 4123; Plants - 4597; Viruses - 447; Other Eukaryotes - 15154 (source: NCBI BLink). & (reliability: 312.0) & (original description: no original description)

Gene families : OG_42_0000493 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000493_tree

Sequence : coding (download), protein (download)

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Pseudotsuga release: PSME_00043733-RA
Cluster	HCCA clusters: Cluster_2

Target	Alias	Description	ECC score	Gene Family Method
147026	No alias	WRKY DNA-binding protein 17	0.03	Orthogroups_2024-Update
Brara.D01481.1	No alias	WRKY-type transcription factor	0.02	Orthogroups_2024-Update
Brara.D01831.1	No alias	WRKY-type transcription factor	0.03	Orthogroups_2024-Update
Brara.H01343.1	No alias	WRKY-type transcription factor	0.02	Orthogroups_2024-Update
GRMZM2G070211	No alias	WRKY DNA-binding protein 21	0.03	Orthogroups_2024-Update
GRMZM2G071907	No alias	WRKY DNA-binding protein 11	0.03	Orthogroups_2024-Update
GRMZM2G090594	No alias	WRKY DNA-binding protein 11	0.02	Orthogroups_2024-Update
GRMZM2G091331	No alias	WRKY DNA-binding protein 11	0.04	Orthogroups_2024-Update
GRMZM2G130374	No alias	WRKY DNA-binding protein 21	0.02	Orthogroups_2024-Update
GRMZM2G148561	No alias	WRKY DNA-binding protein 11	0.03	Orthogroups_2024-Update
GRMZM5G880069	No alias	WRKY DNA-binding protein 74	0.02	Orthogroups_2024-Update
Glyma.01G189100	No alias	WRKY DNA-binding protein 15	0.03	Orthogroups_2024-Update
Glyma.17G197500	No alias	WRKY DNA-binding protein 11	0.02	Orthogroups_2024-Update
Glyma.17G239200	No alias	WRKY DNA-binding protein 7	0.02	Orthogroups_2024-Update
HORVU3Hr1G039500.1	No alias	WRKY-type transcription factor	0.02	Orthogroups_2024-Update
LOC_Os03g53050	No alias	WRKY121, expressed	0.05	Orthogroups_2024-Update
LOC_Os12g40570	No alias	WRKY94, expressed	0.02	Orthogroups_2024-Update
MA_31009g0010	No alias	no hits & (original description: no original description)	0.05	Orthogroups_2024-Update
MA_88419g0010	No alias	(at2g30590 : 170.0) Encodes WRKY DNA-binding protein 21...	0.04	Orthogroups_2024-Update
Mp3g00010.1	No alias	transcription factor (WRKY)	0.02	Orthogroups_2024-Update
Potri.006G072400	No alias	WRKY DNA-binding protein 11	0.04	Orthogroups_2024-Update
Potri.018G008500	No alias	WRKY DNA-binding protein 11	0.04	Orthogroups_2024-Update
Potri.018G139300	No alias	WRKY DNA-binding protein 11	0.04	Orthogroups_2024-Update
Seita.7G043000.1	No alias	WRKY-type transcription factor	0.02	Orthogroups_2024-Update
Sobic.004G138400.2	No alias	WRKY-type transcription factor	0.02	Orthogroups_2024-Update
Sobic.007G085300.1	No alias	WRKY-type transcription factor	0.04	Orthogroups_2024-Update
Sopen08g002300	No alias	WRKY DNA -binding domain	0.04	Orthogroups_2024-Update

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003676	nucleic acid binding	None	Extended
MF	GO:0003677	DNA binding	None	Extended
MF	GO:0003700	DNA-binding transcription factor activity	IEA	InterProScan predictions
MF	GO:0005488	binding	None	Extended
BP	GO:0006355	regulation of transcription, DNA-templated	IEA	InterProScan predictions
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009889	regulation of biosynthetic process	None	Extended
BP	GO:0010468	regulation of gene expression	None	Extended
BP	GO:0010556	regulation of macromolecule biosynthetic process	None	Extended
BP	GO:0019219	regulation of nucleobase-containing compound metabolic process	None	Extended
BP	GO:0019222	regulation of metabolic process	None	Extended
BP	GO:0031323	regulation of cellular metabolic process	None	Extended
BP	GO:0031326	regulation of cellular biosynthetic process	None	Extended
MF	GO:0043565	sequence-specific DNA binding	IEA	InterProScan predictions
BP	GO:0050789	regulation of biological process	None	Extended
BP	GO:0050794	regulation of cellular process	None	Extended
BP	GO:0051171	regulation of nitrogen compound metabolic process	None	Extended
BP	GO:0051252	regulation of RNA metabolic process	None	Extended
BP	GO:0060255	regulation of macromolecule metabolic process	None	Extended
BP	GO:0065007	biological regulation	None	Extended
BP	GO:0080090	regulation of primary metabolic process	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:0140110	transcription regulator activity	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended
BP	GO:1903506	regulation of nucleic acid-templated transcription	None	Extended
BP	GO:2000112	regulation of cellular macromolecule biosynthetic process	None	Extended
BP	GO:2001141	regulation of RNA biosynthetic process	None	Extended

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Type	GO Term	Name	Evidence	Source
MF	GO:0000166	nucleotide binding	IEP	Predicted GO
MF	GO:0004672	protein kinase activity	IEP	Predicted GO
MF	GO:0005524	ATP binding	IEP	Predicted GO
BP	GO:0006464	cellular protein modification process	IEP	Predicted GO
BP	GO:0006468	protein phosphorylation	IEP	Predicted GO
BP	GO:0006793	phosphorus metabolic process	IEP	Predicted GO
BP	GO:0006796	phosphate-containing compound metabolic process	IEP	Predicted GO
BP	GO:0006807	nitrogen compound metabolic process	IEP	Predicted GO
MF	GO:0008144	drug binding	IEP	Predicted GO
BP	GO:0009987	cellular process	IEP	Predicted GO
BP	GO:0015969	guanosine tetraphosphate metabolic process	IEP	Predicted GO
MF	GO:0016301	kinase activity	IEP	Predicted GO
BP	GO:0016310	phosphorylation	IEP	Predicted GO
MF	GO:0016740	transferase activity	IEP	Predicted GO
MF	GO:0016772	transferase activity, transferring phosphorus-containing groups	IEP	Predicted GO
MF	GO:0016773	phosphotransferase activity, alcohol group as acceptor	IEP	Predicted GO
MF	GO:0017076	purine nucleotide binding	IEP	Predicted GO
BP	GO:0019538	protein metabolic process	IEP	Predicted GO
MF	GO:0030554	adenyl nucleotide binding	IEP	Predicted GO
MF	GO:0032553	ribonucleotide binding	IEP	Predicted GO
MF	GO:0032555	purine ribonucleotide binding	IEP	Predicted GO
MF	GO:0032559	adenyl ribonucleotide binding	IEP	Predicted GO
BP	GO:0033865	nucleoside bisphosphate metabolic process	IEP	Predicted GO
BP	GO:0033875	ribonucleoside bisphosphate metabolic process	IEP	Predicted GO
BP	GO:0034032	purine nucleoside bisphosphate metabolic process	IEP	Predicted GO
BP	GO:0034035	purine ribonucleoside bisphosphate metabolic process	IEP	Predicted GO
MF	GO:0035639	purine ribonucleoside triphosphate binding	IEP	Predicted GO
MF	GO:0036094	small molecule binding	IEP	Predicted GO
BP	GO:0036211	protein modification process	IEP	Predicted GO
MF	GO:0043168	anion binding	IEP	Predicted GO
BP	GO:0043170	macromolecule metabolic process	IEP	Predicted GO
BP	GO:0043412	macromolecule modification	IEP	Predicted GO
BP	GO:0044237	cellular metabolic process	IEP	Predicted GO
BP	GO:0044238	primary metabolic process	IEP	Predicted GO
BP	GO:0044260	cellular macromolecule metabolic process	IEP	Predicted GO
BP	GO:0044267	cellular protein metabolic process	IEP	Predicted GO
BP	GO:0051259	protein complex oligomerization	IEP	Predicted GO
BP	GO:0051260	protein homooligomerization	IEP	Predicted GO
MF	GO:0061630	ubiquitin protein ligase activity	IEP	Predicted GO
MF	GO:0061659	ubiquitin-like protein ligase activity	IEP	Predicted GO
BP	GO:0071704	organic substance metabolic process	IEP	Predicted GO
MF	GO:0097367	carbohydrate derivative binding	IEP	Predicted GO
MF	GO:0140096	catalytic activity, acting on a protein	IEP	Predicted GO
MF	GO:1901265	nucleoside phosphate binding	IEP	Predicted GO
BP	GO:1901564	organonitrogen compound metabolic process	IEP	Predicted GO

InterPro domains	Description	Start	Stop
IPR018872	Zn-cluster-dom	366	414
IPR003657	WRKY_dom	418	474

External Links

No external refs found!

PSME_00043733-RA

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation