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  5. PSME_00043800-RA

PSME_00043800-RA


Description : (at5g36930 : 119.0) Disease resistance protein (TIR-NBS-LRR class) family; FUNCTIONS IN: transmembrane receptor activity, ATP binding; INVOLVED IN: signal transduction, defense response, apoptosis, innate immune response; LOCATED IN: intrinsic to membrane; EXPRESSED IN: 19 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: NB-ARC (InterPro:IPR002182), Toll-Interleukin receptor (InterPro:IPR000157), Disease resistance protein (InterPro:IPR000767); BEST Arabidopsis thaliana protein match is: disease resistance protein (TIR-NBS-LRR class), putative (TAIR:AT5G17680.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 224.0) & (original description: no original description)


Gene families : OG_42_0000010 (Orthogroups_2024-Update) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Pseudotsuga release: PSME_00043800-RA
Cluster HCCA clusters: Cluster_40

Target Alias Description ECC score Gene Family Method Actions
A4A49_16559 No alias tmv resistance protein n 0.03 Orthogroups_2024-Update
A4A49_29374 No alias tmv resistance protein n 0.04 Orthogroups_2024-Update
A4A49_34609 No alias tmv resistance protein n 0.03 Orthogroups_2024-Update
At1g63870 No alias Disease resistance protein (TIR-NBS-LRR class) family... 0.04 Orthogroups_2024-Update
At1g64070 No alias Disease resistance protein RML1A... 0.03 Orthogroups_2024-Update
At3g04220 No alias Disease resistance protein (TIR-NBS-LRR class) family... 0.03 Orthogroups_2024-Update
At5g40100 No alias Disease resistance protein (TIR-NBS-LRR class) family... 0.02 Orthogroups_2024-Update
At5g48770 No alias Disease resistance protein [Source:UniProtKB/TrEMBL;Acc:Q9FKB9] 0.02 Orthogroups_2024-Update
Brara.A00236.1 No alias Unknown function 0.02 Orthogroups_2024-Update
Brara.A03788.1 No alias Unknown function 0.03 Orthogroups_2024-Update
Brara.C00455.1 No alias effector receptor *(NLR) 0.02 Orthogroups_2024-Update
Brara.C00456.1 No alias effector receptor *(NLR) 0.02 Orthogroups_2024-Update
Glyma.02G076900 No alias disease resistance protein (TIR-NBS-LRR class), putative 0.02 Orthogroups_2024-Update
Glyma.03G047900 No alias Disease resistance protein (TIR-NBS-LRR class) family 0.03 Orthogroups_2024-Update
Glyma.03G053300 No alias Disease resistance protein (TIR-NBS-LRR class) family 0.03 Orthogroups_2024-Update
Glyma.06G263900 No alias disease resistance protein (TIR-NBS-LRR class), putative 0.02 Orthogroups_2024-Update
Glyma.06G264300 No alias disease resistance protein (TIR-NBS-LRR class), putative 0.02 Orthogroups_2024-Update
Glyma.09G161400 No alias Disease resistance protein (TIR-NBS-LRR class) family 0.04 Orthogroups_2024-Update
Glyma.12G239200 No alias Disease resistance protein (TIR-NBS-LRR class) family 0.02 Orthogroups_2024-Update
Glyma.12G240100 No alias disease resistance protein (TIR-NBS-LRR class), putative 0.03 Orthogroups_2024-Update
Glyma.14G151100 No alias disease resistance protein (TIR-NBS-LRR class), putative 0.04 Orthogroups_2024-Update
Glyma.16G136200 No alias disease resistance protein (TIR-NBS-LRR class), putative 0.02 Orthogroups_2024-Update
Glyma.16G159600 No alias Disease resistance protein (TIR-NBS-LRR class) family 0.03 Orthogroups_2024-Update
Glyma.16G159700 No alias disease resistance protein (TIR-NBS-LRR class), putative 0.03 Orthogroups_2024-Update
Glyma.19G022700 No alias Disease resistance protein (TIR-NBS-LRR class) family 0.03 Orthogroups_2024-Update
Glyma.U005000 No alias target of AVRB operation1 0.03 Orthogroups_2024-Update
LOC_Os11g38000 No alias NB-ARC domain containing protein, expressed 0.02 Orthogroups_2024-Update
MA_10427411g0010 No alias (at1g27170 : 153.0) transmembrane receptors;ATP binding;... 0.03 Orthogroups_2024-Update
MA_10434398g0010 No alias (at1g27170 : 414.0) transmembrane receptors;ATP binding;... 0.03 Orthogroups_2024-Update
MA_26170g0010 No alias (at5g36930 : 147.0) Disease resistance protein... 0.03 Orthogroups_2024-Update
MA_30664g0020 No alias (at5g36930 : 82.8) Disease resistance protein... 0.02 Orthogroups_2024-Update
MA_390667g0010 No alias (at5g36930 : 227.0) Disease resistance protein... 0.02 Orthogroups_2024-Update
MA_741636g0010 No alias (at1g27170 : 144.0) transmembrane receptors;ATP binding;... 0.02 Orthogroups_2024-Update
MA_746330g0010 No alias no hits & (original description: no original description) 0.02 Orthogroups_2024-Update
MA_8307592g0010 No alias no hits & (original description: no original description) 0.03 Orthogroups_2024-Update
PSME_00002866-RA No alias (at1g27180 : 167.0) disease resistance protein... 0.05 Orthogroups_2024-Update
PSME_00004928-RA No alias (at1g27170 : 138.0) transmembrane receptors;ATP binding;... 0.04 Orthogroups_2024-Update
PSME_00006302-RA No alias (at1g72840 : 118.0) Disease resistance protein... 0.04 Orthogroups_2024-Update
PSME_00006304-RA No alias (at1g69550 : 109.0) disease resistance protein... 0.05 Orthogroups_2024-Update
PSME_00018710-RA No alias (at1g69550 : 113.0) disease resistance protein... 0.04 Orthogroups_2024-Update
PSME_00041459-RA No alias (at5g36930 : 241.0) Disease resistance protein... 0.04 Orthogroups_2024-Update
PSME_00055131-RA No alias no hits & (original description: no original description) 0.05 Orthogroups_2024-Update
Potri.002G056050 No alias Disease resistance protein (TIR-NBS-LRR class) family 0.02 Orthogroups_2024-Update
Potri.002G056100 No alias Disease resistance protein (TIR-NBS-LRR class) family 0.03 Orthogroups_2024-Update
Potri.005G206400 No alias Disease resistance protein (TIR-NBS-LRR class) family 0.02 Orthogroups_2024-Update
Potri.008G220200 No alias Disease resistance protein (TIR-NBS-LRR class) family 0.02 Orthogroups_2024-Update
Potri.011G008400 No alias Disease resistance protein (TIR-NBS-LRR class) family 0.02 Orthogroups_2024-Update
Potri.011G013201 No alias transmembrane receptors;ATP binding 0.02 Orthogroups_2024-Update
Potri.013G097000 No alias disease resistance protein (TIR-NBS-LRR class), putative 0.02 Orthogroups_2024-Update
Potri.015G043600 No alias transmembrane receptors;ATP binding 0.03 Orthogroups_2024-Update
Potri.017G103800 No alias disease resistance protein (TIR-NBS-LRR class), putative 0.03 Orthogroups_2024-Update
Potri.017G105500 No alias Disease resistance protein (TIR-NBS-LRR class) family 0.02 Orthogroups_2024-Update
Potri.019G052000 No alias Disease resistance protein (TIR-NBS-LRR class) family 0.03 Orthogroups_2024-Update
Potri.019G068300 No alias disease resistance protein (TIR-NBS-LRR class), putative 0.02 Orthogroups_2024-Update
Potri.019G070460 No alias disease resistance protein (TIR-NBS-LRR class), putative 0.03 Orthogroups_2024-Update
Potri.T002600 No alias Disease resistance protein (TIR-NBS-LRR class) family 0.03 Orthogroups_2024-Update
Potri.T038300 No alias Disease resistance protein (TIR-NBS-LRR class) family 0.02 Orthogroups_2024-Update
Potri.T077532 No alias disease resistance protein (TIR-NBS-LRR class), putative 0.03 Orthogroups_2024-Update
Potri.T112700 No alias Disease resistance protein (TIR-NBS-LRR class) family 0.03 Orthogroups_2024-Update
Pp1s226_63V6 No alias tir-nbs-lrr resistance protein 0.02 Orthogroups_2024-Update
Pp1s37_60V6 No alias cc-nbs-lrr resistance protein 0.02 Orthogroups_2024-Update
Solyc01g014840 No alias disease resistance protein (TIR-NBS-LRR class) (AHRD... 0.03 Orthogroups_2024-Update
Sopen05g003710 No alias NB-ARC domain 0.02 Orthogroups_2024-Update
Sopen06g023620 No alias Leucine rich repeat 0.02 Orthogroups_2024-Update
Sopen06g023650 No alias TIR domain 0.02 Orthogroups_2024-Update
Sopen11g006130 No alias NB-ARC domain 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA InterProScan predictions
BP GO:0007165 signal transduction IEA InterProScan predictions
Toggle parental
Type GO Term Name Evidence Source
MF GO:0001871 pattern binding IEP Predicted GO
BP GO:0003352 regulation of cilium movement IEP Predicted GO
MF GO:0003824 catalytic activity IEP Predicted GO
MF GO:0004175 endopeptidase activity IEP Predicted GO
MF GO:0004252 serine-type endopeptidase activity IEP Predicted GO
MF GO:0004421 hydroxymethylglutaryl-CoA synthase activity IEP Predicted GO
MF GO:0004474 malate synthase activity IEP Predicted GO
MF GO:0004527 exonuclease activity IEP Predicted GO
MF GO:0004553 hydrolase activity, hydrolyzing O-glycosyl compounds IEP Predicted GO
MF GO:0004556 alpha-amylase activity IEP Predicted GO
MF GO:0004568 chitinase activity IEP Predicted GO
MF GO:0004672 protein kinase activity IEP Predicted GO
BP GO:0006022 aminoglycan metabolic process IEP Predicted GO
BP GO:0006026 aminoglycan catabolic process IEP Predicted GO
BP GO:0006030 chitin metabolic process IEP Predicted GO
BP GO:0006032 chitin catabolic process IEP Predicted GO
BP GO:0006040 amino sugar metabolic process IEP Predicted GO
BP GO:0006081 cellular aldehyde metabolic process IEP Predicted GO
BP GO:0006097 glyoxylate cycle IEP Predicted GO
BP GO:0006468 protein phosphorylation IEP Predicted GO
BP GO:0006629 lipid metabolic process IEP Predicted GO
BP GO:0008152 metabolic process IEP Predicted GO
BP GO:0009605 response to external stimulus IEP Predicted GO
BP GO:0009607 response to biotic stimulus IEP Predicted GO
BP GO:0009617 response to bacterium IEP Predicted GO
BP GO:0009620 response to fungus IEP Predicted GO
MF GO:0016301 kinase activity IEP Predicted GO
BP GO:0016310 phosphorylation IEP Predicted GO
MF GO:0016740 transferase activity IEP Predicted GO
MF GO:0016757 transferase activity, transferring glycosyl groups IEP Predicted GO
MF GO:0016758 transferase activity, transferring hexosyl groups IEP Predicted GO
MF GO:0016773 phosphotransferase activity, alcohol group as acceptor IEP Predicted GO
MF GO:0016798 hydrolase activity, acting on glycosyl bonds IEP Predicted GO
MF GO:0016868 intramolecular transferase activity, phosphotransferases IEP Predicted GO
BP GO:0016998 cell wall macromolecule catabolic process IEP Predicted GO
MF GO:0030246 carbohydrate binding IEP Predicted GO
MF GO:0030247 polysaccharide binding IEP Predicted GO
BP GO:0032879 regulation of localization IEP Predicted GO
BP GO:0032886 regulation of microtubule-based process IEP Predicted GO
BP GO:0042737 drug catabolic process IEP Predicted GO
BP GO:0042742 defense response to bacterium IEP Predicted GO
BP GO:0043207 response to external biotic stimulus IEP Predicted GO
BP GO:0044036 cell wall macromolecule metabolic process IEP Predicted GO
BP GO:0044238 primary metabolic process IEP Predicted GO
BP GO:0046348 amino sugar catabolic process IEP Predicted GO
BP GO:0046487 glyoxylate metabolic process IEP Predicted GO
MF GO:0046912 transferase activity, transferring acyl groups, acyl groups converted into alkyl on transfer IEP Predicted GO
BP GO:0050832 defense response to fungus IEP Predicted GO
BP GO:0051270 regulation of cellular component movement IEP Predicted GO
BP GO:0051704 multi-organism process IEP Predicted GO
BP GO:0051707 response to other organism IEP Predicted GO
BP GO:0060632 regulation of microtubule-based movement IEP Predicted GO
BP GO:0071704 organic substance metabolic process IEP Predicted GO
BP GO:0098542 defense response to other organism IEP Predicted GO
MF GO:0140096 catalytic activity, acting on a protein IEP Predicted GO
BP GO:1901071 glucosamine-containing compound metabolic process IEP Predicted GO
BP GO:1901072 glucosamine-containing compound catabolic process IEP Predicted GO
BP GO:1901136 carbohydrate derivative catabolic process IEP Predicted GO
BP GO:1901565 organonitrogen compound catabolic process IEP Predicted GO
InterPro domains Description Start Stop
IPR000157 TIR_dom 8 174
No external refs found!