PSME_00046543-RA

Description : (at4g18910 : 279.0) Encodes an aquaporin homolog. Functions in arsenite transport and tolerance.When expressed in yeast cells can conduct hydrogen peroxide into those cells.; NOD26-like intrinsic protein 1;2 (NIP1;2); FUNCTIONS IN: water channel activity, arsenite transmembrane transporter activity; INVOLVED IN: transport, hydrogen peroxide transmembrane transport, response to arsenic, arsenite transport; LOCATED IN: plasma membrane, membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Major intrinsic protein, conserved site (InterPro:IPR022357), Aquaporin (InterPro:IPR012269), Major intrinsic protein (InterPro:IPR000425); BEST Arabidopsis thaliana protein match is: NOD26-like major intrinsic protein 1 (TAIR:AT4G19030.1); Has 10753 Blast hits to 10647 proteins in 2223 species: Archae - 110; Bacteria - 5339; Metazoa - 1367; Fungi - 450; Plants - 2101; Viruses - 4; Other Eukaryotes - 1382 (source: NCBI BLink). & (p08995|no26_soybn : 271.0) Nodulin-26 (N-26) - Glycine max (Soybean) & (reliability: 558.0) & (original description: no original description)

Gene families : OG_42_0000209 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000209_tree

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Pseudotsuga release: PSME_00046543-RA
Cluster	HCCA clusters: Cluster_150

Target	Alias	Description	ECC score	Gene Family Method
A4A49_06842	No alias	putative aquaporin nip-type	0.02	Orthogroups_2024-Update
At4g10380	No alias	At4g10380 [Source:UniProtKB/TrEMBL;Acc:A3KPG0]	0.02	Orthogroups_2024-Update
Bradi3g08930	No alias	NOD26-like intrinsic protein 1;2	0.03	Orthogroups_2024-Update
Bradi3g17101	No alias	NOD26-like intrinsic protein 5;1	0.02	Orthogroups_2024-Update
Brara.A01000.1	No alias	Nodulin-26-like intrinsic protein *(NIP)	0.02	Orthogroups_2024-Update
Brara.B02396.1	No alias	Nodulin-26-like intrinsic protein *(NIP)	0.03	Orthogroups_2024-Update
Brara.B02894.1	No alias	Nodulin-26-like intrinsic protein *(NIP)	0.03	Orthogroups_2024-Update
Brara.C02640.1	No alias	Nodulin-26-like intrinsic protein *(NIP)	0.03	Orthogroups_2024-Update
Brara.E00986.1	No alias	Nodulin-26-like intrinsic protein *(NIP)	0.03	Orthogroups_2024-Update
Brara.E03308.1	No alias	Nodulin-26-like intrinsic protein *(NIP)	0.02	Orthogroups_2024-Update
GRMZM2G081239	No alias	NOD26-like intrinsic protein 4;2	0.03	Orthogroups_2024-Update
GRMZM2G137108	No alias	NOD26-like intrinsic protein 4;2	0.03	Orthogroups_2024-Update
Glyma.02G246700	No alias	NOD26-like intrinsic protein 4;2	0.02	Orthogroups_2024-Update
Glyma.05G162600	No alias	NOD26-like intrinsic protein 1;2	0.02	Orthogroups_2024-Update
Glyma.08G120200	No alias	NOD26-like intrinsic protein 1;2	0.05	Orthogroups_2024-Update
Glyma.15G003900	No alias	NOD26-like intrinsic protein 6;1	0.03	Orthogroups_2024-Update
HORVU1Hr1G047100.1	No alias	Nodulin-26-like intrinsic protein *(NIP)	0.02	Orthogroups_2024-Update
HORVU7Hr1G038220.1	No alias	Nodulin-26-like intrinsic protein *(NIP)	0.04	Orthogroups_2024-Update
LOC_Os02g13870	No alias	aquaporin protein, putative, expressed	0.03	Orthogroups_2024-Update
LOC_Os06g12310	No alias	aquaporin protein, putative, expressed	0.03	Orthogroups_2024-Update
LOC_Os08g05590	No alias	aquaporin protein, putative, expressed	0.02	Orthogroups_2024-Update
LOC_Os10g36924	No alias	aquaporin protein, putative, expressed	0.03	Orthogroups_2024-Update
MA_10990g0010	No alias	(at4g18910 : 279.0) Encodes an aquaporin homolog....	0.07	Orthogroups_2024-Update
MA_158586g0010	No alias	(at4g10380 : 303.0) Boric acid channel. Essential for...	0.03	Orthogroups_2024-Update
MA_60111g0010	No alias	(at1g80760 : 264.0) Encodes a protein with boron...	0.03	Orthogroups_2024-Update
MA_93825g0010	No alias	(at4g18910 : 263.0) Encodes an aquaporin homolog....	0.05	Orthogroups_2024-Update
MA_9571426g0010	No alias	(at4g18910 : 276.0) Encodes an aquaporin homolog....	0.04	Orthogroups_2024-Update
PSME_00008580-RA	No alias	(at4g18910 : 276.0) Encodes an aquaporin homolog....	0.05	Orthogroups_2024-Update
PSME_00013963-RA	No alias	(at4g18910 : 276.0) Encodes an aquaporin homolog....	0.01	Orthogroups_2024-Update
PSME_00025105-RA	No alias	(at1g80760 : 287.0) Encodes a protein with boron...	0.03	Orthogroups_2024-Update
PSME_00025106-RA	No alias	(at1g80760 : 300.0) Encodes a protein with boron...	0.05	Orthogroups_2024-Update
PSME_00034328-RA	No alias	(at4g10380 : 267.0) Boric acid channel. Essential for...	0.02	Orthogroups_2024-Update
PSME_00043406-RA	No alias	(at4g18910 : 245.0) Encodes an aquaporin homolog....	0.06	Orthogroups_2024-Update
PSME_00043798-RA	No alias	(at4g18910 : 219.0) Encodes an aquaporin homolog....	0.04	Orthogroups_2024-Update
PSME_00044920-RA	No alias	(at4g18910 : 250.0) Encodes an aquaporin homolog....	0.02	Orthogroups_2024-Update
PSME_00046327-RA	No alias	(at4g18910 : 271.0) Encodes an aquaporin homolog....	0.06	Orthogroups_2024-Update
Potri.011G072100	No alias	NOD26-like intrinsic protein 1;2	0.02	Orthogroups_2024-Update
Seita.4G098700.1	No alias	Nodulin-26-like intrinsic protein *(NIP)	0.02	Orthogroups_2024-Update
Sobic.004G238100.1	No alias	Nodulin-26-like intrinsic protein *(NIP)	0.02	Orthogroups_2024-Update
Solyc12g057050	No alias	NOD26-like intrinsic protein 3.2	0.03	Orthogroups_2024-Update

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0005215	transporter activity	None	Extended
CC	GO:0005575	cellular_component	None	Extended
BP	GO:0006810	transport	None	Extended
BP	GO:0008150	biological_process	None	Extended
MF	GO:0015267	channel activity	IEA	InterProScan predictions
CC	GO:0016020	membrane	IEA	InterProScan predictions
MF	GO:0022803	passive transmembrane transporter activity	None	Extended
MF	GO:0022857	transmembrane transporter activity	None	Extended
BP	GO:0051179	localization	None	Extended
BP	GO:0051234	establishment of localization	None	Extended
BP	GO:0055085	transmembrane transport	IEA	InterProScan predictions

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Type	GO Term	Name	Evidence	Source
MF	GO:0003700	DNA-binding transcription factor activity	IEP	Predicted GO
MF	GO:0003824	catalytic activity	IEP	Predicted GO
MF	GO:0004180	carboxypeptidase activity	IEP	Predicted GO
MF	GO:0004185	serine-type carboxypeptidase activity	IEP	Predicted GO
MF	GO:0004332	fructose-bisphosphate aldolase activity	IEP	Predicted GO
MF	GO:0004601	peroxidase activity	IEP	Predicted GO
MF	GO:0004888	transmembrane signaling receptor activity	IEP	Predicted GO
MF	GO:0004970	ionotropic glutamate receptor activity	IEP	Predicted GO
MF	GO:0005216	ion channel activity	IEP	Predicted GO
MF	GO:0005230	extracellular ligand-gated ion channel activity	IEP	Predicted GO
MF	GO:0005488	binding	IEP	Predicted GO
MF	GO:0005506	iron ion binding	IEP	Predicted GO
CC	GO:0005576	extracellular region	IEP	Predicted GO
CC	GO:0005618	cell wall	IEP	Predicted GO
BP	GO:0006355	regulation of transcription, DNA-templated	IEP	Predicted GO
BP	GO:0006873	cellular ion homeostasis	IEP	Predicted GO
BP	GO:0006875	cellular metal ion homeostasis	IEP	Predicted GO
BP	GO:0006879	cellular iron ion homeostasis	IEP	Predicted GO
BP	GO:0006979	response to oxidative stress	IEP	Predicted GO
MF	GO:0008066	glutamate receptor activity	IEP	Predicted GO
MF	GO:0008107	galactoside 2-alpha-L-fucosyltransferase activity	IEP	Predicted GO
BP	GO:0008152	metabolic process	IEP	Predicted GO
MF	GO:0008199	ferric iron binding	IEP	Predicted GO
MF	GO:0008236	serine-type peptidase activity	IEP	Predicted GO
MF	GO:0008417	fucosyltransferase activity	IEP	Predicted GO
BP	GO:0009889	regulation of biosynthetic process	IEP	Predicted GO
BP	GO:0010468	regulation of gene expression	IEP	Predicted GO
BP	GO:0010556	regulation of macromolecule biosynthetic process	IEP	Predicted GO
MF	GO:0015075	ion transmembrane transporter activity	IEP	Predicted GO
MF	GO:0015276	ligand-gated ion channel activity	IEP	Predicted GO
MF	GO:0015318	inorganic molecular entity transmembrane transporter activity	IEP	Predicted GO
MF	GO:0016209	antioxidant activity	IEP	Predicted GO
MF	GO:0016491	oxidoreductase activity	IEP	Predicted GO
MF	GO:0016684	oxidoreductase activity, acting on peroxide as acceptor	IEP	Predicted GO
MF	GO:0016705	oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen	IEP	Predicted GO
MF	GO:0016762	xyloglucan:xyloglucosyl transferase activity	IEP	Predicted GO
MF	GO:0016832	aldehyde-lyase activity	IEP	Predicted GO
MF	GO:0016887	ATPase activity	IEP	Predicted GO
MF	GO:0017171	serine hydrolase activity	IEP	Predicted GO
BP	GO:0019219	regulation of nucleobase-containing compound metabolic process	IEP	Predicted GO
MF	GO:0020037	heme binding	IEP	Predicted GO
MF	GO:0022824	transmitter-gated ion channel activity	IEP	Predicted GO
MF	GO:0022834	ligand-gated channel activity	IEP	Predicted GO
MF	GO:0022835	transmitter-gated channel activity	IEP	Predicted GO
MF	GO:0022836	gated channel activity	IEP	Predicted GO
MF	GO:0022838	substrate-specific channel activity	IEP	Predicted GO
MF	GO:0022839	ion gated channel activity	IEP	Predicted GO
BP	GO:0030003	cellular cation homeostasis	IEP	Predicted GO
CC	GO:0030312	external encapsulating structure	IEP	Predicted GO
MF	GO:0030594	neurotransmitter receptor activity	IEP	Predicted GO
MF	GO:0031127	alpha-(1,2)-fucosyltransferase activity	IEP	Predicted GO
BP	GO:0031326	regulation of cellular biosynthetic process	IEP	Predicted GO
MF	GO:0038023	signaling receptor activity	IEP	Predicted GO
BP	GO:0042546	cell wall biogenesis	IEP	Predicted GO
MF	GO:0043169	cation binding	IEP	Predicted GO
BP	GO:0044085	cellular component biogenesis	IEP	Predicted GO
MF	GO:0046872	metal ion binding	IEP	Predicted GO
MF	GO:0046906	tetrapyrrole binding	IEP	Predicted GO
BP	GO:0046916	cellular transition metal ion homeostasis	IEP	Predicted GO
MF	GO:0048037	cofactor binding	IEP	Predicted GO
CC	GO:0048046	apoplast	IEP	Predicted GO
BP	GO:0048878	chemical homeostasis	IEP	Predicted GO
BP	GO:0050801	ion homeostasis	IEP	Predicted GO
BP	GO:0051252	regulation of RNA metabolic process	IEP	Predicted GO
MF	GO:0051287	NAD binding	IEP	Predicted GO
BP	GO:0055065	metal ion homeostasis	IEP	Predicted GO
BP	GO:0055072	iron ion homeostasis	IEP	Predicted GO
BP	GO:0055076	transition metal ion homeostasis	IEP	Predicted GO
BP	GO:0055080	cation homeostasis	IEP	Predicted GO
BP	GO:0055082	cellular chemical homeostasis	IEP	Predicted GO
BP	GO:0055114	oxidation-reduction process	IEP	Predicted GO
MF	GO:0060089	molecular transducer activity	IEP	Predicted GO
BP	GO:0065007	biological regulation	IEP	Predicted GO
BP	GO:0098771	inorganic ion homeostasis	IEP	Predicted GO
MF	GO:0140096	catalytic activity, acting on a protein	IEP	Predicted GO
BP	GO:1903506	regulation of nucleic acid-templated transcription	IEP	Predicted GO
BP	GO:2000112	regulation of cellular macromolecule biosynthetic process	IEP	Predicted GO
BP	GO:2001141	regulation of RNA biosynthetic process	IEP	Predicted GO

InterPro domains	Description	Start	Stop
IPR000425	MIP	40	250

External Links

No external refs found!

PSME_00046543-RA

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation