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  5. PSME_00047142-RA

PSME_00047142-RA


Description : (p30079|chsy_pinsy : 765.0) Chalcone synthase (EC 2.3.1.74) (Naringenin-chalcone synthase) - Pinus sylvestris (Scots pine) & (at5g13930 : 646.0) Encodes chalcone synthase (CHS), a key enzyme involved in the biosynthesis of flavonoids. Required for the accumulation of purple anthocyanins in leaves and stems. Also involved in the regulation of auxin transport and the modulation of root gravitropism.; TRANSPARENT TESTA 4 (TT4); FUNCTIONS IN: naringenin-chalcone synthase activity; INVOLVED IN: in 11 processes; LOCATED IN: plant-type vacuole membrane, endoplasmic reticulum, nucleus; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Chalcone/stilbene synthase, N-terminal (InterPro:IPR001099), Thiolase-like (InterPro:IPR016039), Polyketide synthase, type III (InterPro:IPR011141), Chalcone/stilbene synthase, active site (InterPro:IPR018088), Chalcone/stilbene synthase, C-terminal (InterPro:IPR012328), Thiolase-like, subgroup (InterPro:IPR016038); BEST Arabidopsis thaliana protein match is: Chalcone and stilbene synthase family protein (TAIR:AT4G34850.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 1292.0) & (original description: no original description)


Gene families : OG_42_0000385 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000385_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Pseudotsuga release: PSME_00047142-RA
Cluster HCCA clusters: Cluster_1

Target Alias Description ECC score Gene Family Method Actions
At5g13930 No alias TT4 [Source:UniProtKB/TrEMBL;Acc:A0A178UKS9] 0.03 Orthogroups_2024-Update
Bradi4g17230 No alias Chalcone and stilbene synthase family protein 0.06 Orthogroups_2024-Update
Glyma.05G153200 No alias Chalcone and stilbene synthase family protein 0.03 Orthogroups_2024-Update
Glyma.08G109200 No alias Chalcone and stilbene synthase family protein 0.02 Orthogroups_2024-Update
Glyma.08G109500 No alias Chalcone and stilbene synthase family protein 0.03 Orthogroups_2024-Update
Glyma.08G110300 No alias Chalcone and stilbene synthase family protein 0.03 Orthogroups_2024-Update
Glyma.08G110340 No alias Chalcone and stilbene synthase family protein 0.02 Orthogroups_2024-Update
HORVU2Hr1G004170.4 No alias chalcone synthase & EC_2.3 acyltransferase 0.03 Orthogroups_2024-Update
HORVU2Hr1G005220.3 No alias chalcone synthase & EC_2.3 acyltransferase 0.03 Orthogroups_2024-Update
MA_10426264g0020 No alias (p30079|chsy_pinsy : 776.0) Chalcone synthase (EC... 0.08 Orthogroups_2024-Update
MA_20764g0010 No alias (p30079|chsy_pinsy : 760.0) Chalcone synthase (EC... 0.07 Orthogroups_2024-Update
MA_5735g0010 No alias (p30079|chsy_pinsy : 653.0) Chalcone synthase (EC... 0.08 Orthogroups_2024-Update
Mp2g07060.1 No alias chalcone synthase 0.02 Orthogroups_2024-Update
Mp2g22700.1 No alias chalcone synthase 0.02 Orthogroups_2024-Update
Mp4g14100.1 No alias chalcone synthase 0.02 Orthogroups_2024-Update
Mp4g14150.1 No alias chalcone synthase 0.02 Orthogroups_2024-Update
Mp4g14190.1 No alias chalcone synthase 0.03 Orthogroups_2024-Update
Mp4g14200.1 No alias chalcone synthase 0.03 Orthogroups_2024-Update
Mp4g18370.1 No alias chalcone synthase 0.02 Orthogroups_2024-Update
Mp7g14890.1 No alias chalcone synthase 0.02 Orthogroups_2024-Update
Mp7g14960.1 No alias chalcone synthase 0.02 Orthogroups_2024-Update
Potri.001G051500 No alias Chalcone and stilbene synthase family protein 0.06 Orthogroups_2024-Update
Potri.014G145100 No alias Chalcone and stilbene synthase family protein 0.04 Orthogroups_2024-Update
Pp1s228_25V6 No alias chalcone synthase 0.05 Orthogroups_2024-Update
Pp1s22_4V6 No alias chalcone synthase 0.05 Orthogroups_2024-Update
Seita.8G139300.1 No alias EC_2.3 acyltransferase 0.02 Orthogroups_2024-Update
Seita.8G140200.1 No alias chalcone synthase & EC_2.3 acyltransferase 0.02 Orthogroups_2024-Update
Sobic.005G136200.1 No alias chalcone synthase & EC_2.3 acyltransferase 0.04 Orthogroups_2024-Update
Sobic.005G136300.1 No alias chalcone synthase & EC_2.3 acyltransferase 0.03 Orthogroups_2024-Update
Sobic.005G137000.1 No alias chalcone synthase & EC_2.3 acyltransferase 0.02 Orthogroups_2024-Update
Sobic.005G137200.1 No alias chalcone synthase & EC_2.3 acyltransferase 0.03 Orthogroups_2024-Update
Sobic.005G137300.1 No alias chalcone synthase & EC_2.3 acyltransferase 0.03 Orthogroups_2024-Update
Solyc05g053550 No alias chalcone synthase 2 0.03 Orthogroups_2024-Update
Solyc09g091510 No alias chalcone synthase 1 0.04 Orthogroups_2024-Update
Sopen05g032070 No alias Chalcone and stilbene synthases, N-terminal domain 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0000287 magnesium ion binding IEP Predicted GO
MF GO:0003824 catalytic activity IEP Predicted GO
MF GO:0003849 3-deoxy-7-phosphoheptulonate synthase activity IEP Predicted GO
MF GO:0003855 3-dehydroquinate dehydratase activity IEP Predicted GO
MF GO:0003989 acetyl-CoA carboxylase activity IEP Predicted GO
MF GO:0004664 prephenate dehydratase activity IEP Predicted GO
MF GO:0004764 shikimate 3-dehydrogenase (NADP+) activity IEP Predicted GO
BP GO:0006082 organic acid metabolic process IEP Predicted GO
BP GO:0006520 cellular amino acid metabolic process IEP Predicted GO
BP GO:0006536 glutamate metabolic process IEP Predicted GO
BP GO:0006537 glutamate biosynthetic process IEP Predicted GO
BP GO:0006558 L-phenylalanine metabolic process IEP Predicted GO
BP GO:0006629 lipid metabolic process IEP Predicted GO
BP GO:0006720 isoprenoid metabolic process IEP Predicted GO
BP GO:0006721 terpenoid metabolic process IEP Predicted GO
BP GO:0008299 isoprenoid biosynthetic process IEP Predicted GO
BP GO:0008610 lipid biosynthetic process IEP Predicted GO
BP GO:0008652 cellular amino acid biosynthetic process IEP Predicted GO
MF GO:0008661 1-deoxy-D-xylulose-5-phosphate synthase activity IEP Predicted GO
BP GO:0009058 biosynthetic process IEP Predicted GO
BP GO:0009064 glutamine family amino acid metabolic process IEP Predicted GO
BP GO:0009072 aromatic amino acid family metabolic process IEP Predicted GO
BP GO:0009073 aromatic amino acid family biosynthetic process IEP Predicted GO
BP GO:0009084 glutamine family amino acid biosynthetic process IEP Predicted GO
BP GO:0009094 L-phenylalanine biosynthetic process IEP Predicted GO
BP GO:0009095 aromatic amino acid family biosynthetic process, prephenate pathway IEP Predicted GO
MF GO:0010333 terpene synthase activity IEP Predicted GO
MF GO:0015930 glutamate synthase activity IEP Predicted GO
BP GO:0016053 organic acid biosynthetic process IEP Predicted GO
BP GO:0016114 terpenoid biosynthetic process IEP Predicted GO
MF GO:0016421 CoA carboxylase activity IEP Predicted GO
MF GO:0016491 oxidoreductase activity IEP Predicted GO
MF GO:0016638 oxidoreductase activity, acting on the CH-NH2 group of donors IEP Predicted GO
MF GO:0016701 oxidoreductase activity, acting on single donors with incorporation of molecular oxygen IEP Predicted GO
MF GO:0016702 oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen IEP Predicted GO
MF GO:0016744 transferase activity, transferring aldehyde or ketonic groups IEP Predicted GO
MF GO:0016765 transferase activity, transferring alkyl or aryl (other than methyl) groups IEP Predicted GO
MF GO:0016829 lyase activity IEP Predicted GO
MF GO:0016835 carbon-oxygen lyase activity IEP Predicted GO
MF GO:0016836 hydro-lyase activity IEP Predicted GO
MF GO:0016838 carbon-oxygen lyase activity, acting on phosphates IEP Predicted GO
MF GO:0016885 ligase activity, forming carbon-carbon bonds IEP Predicted GO
BP GO:0019752 carboxylic acid metabolic process IEP Predicted GO
MF GO:0019842 vitamin binding IEP Predicted GO
MF GO:0030170 pyridoxal phosphate binding IEP Predicted GO
BP GO:0043436 oxoacid metabolic process IEP Predicted GO
BP GO:0043648 dicarboxylic acid metabolic process IEP Predicted GO
BP GO:0043650 dicarboxylic acid biosynthetic process IEP Predicted GO
BP GO:0044249 cellular biosynthetic process IEP Predicted GO
BP GO:0044255 cellular lipid metabolic process IEP Predicted GO
BP GO:0044281 small molecule metabolic process IEP Predicted GO
BP GO:0044283 small molecule biosynthetic process IEP Predicted GO
BP GO:0046394 carboxylic acid biosynthetic process IEP Predicted GO
MF GO:0048037 cofactor binding IEP Predicted GO
MF GO:0050662 coenzyme binding IEP Predicted GO
MF GO:0051213 dioxygenase activity IEP Predicted GO
BP GO:0055114 oxidation-reduction process IEP Predicted GO
MF GO:0070279 vitamin B6 binding IEP Predicted GO
MF GO:0071949 FAD binding IEP Predicted GO
BP GO:1901576 organic substance biosynthetic process IEP Predicted GO
BP GO:1901605 alpha-amino acid metabolic process IEP Predicted GO
BP GO:1901607 alpha-amino acid biosynthetic process IEP Predicted GO
BP GO:1902221 erythrose 4-phosphate/phosphoenolpyruvate family amino acid metabolic process IEP Predicted GO
BP GO:1902223 erythrose 4-phosphate/phosphoenolpyruvate family amino acid biosynthetic process IEP Predicted GO
InterPro domains Description Start Stop
IPR001099 Chalcone/stilbene_synthase_N 31 253
IPR012328 Chalcone/stilbene_synth_C 263 413
No external refs found!