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  5. PSME_00047391-RA

PSME_00047391-RA


Description : (at3g53960 : 535.0) Major facilitator superfamily protein; FUNCTIONS IN: transporter activity; INVOLVED IN: oligopeptide transport; LOCATED IN: plasma membrane, membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: PTR2 family proton/oligopeptide symporter, conserved site (InterPro:IPR018456), Oligopeptide transporter (InterPro:IPR000109), Major facilitator superfamily, general substrate transporter (InterPro:IPR016196); BEST Arabidopsis thaliana protein match is: Major facilitator superfamily protein (TAIR:AT2G37900.1); Has 6025 Blast hits to 5886 proteins in 1158 species: Archae - 0; Bacteria - 2442; Metazoa - 501; Fungi - 426; Plants - 2213; Viruses - 0; Other Eukaryotes - 443 (source: NCBI BLink). & (reliability: 1070.0) & (original description: no original description)


Gene families : OG_42_0000015 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000015_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Pseudotsuga release: PSME_00047391-RA
Cluster HCCA clusters: Cluster_12

Target Alias Description ECC score Gene Family Method Actions
165561 No alias peptide transporter 1 0.01 Orthogroups_2024-Update
404409 No alias peptide transporter 2 0.03 Orthogroups_2024-Update
438080 No alias peptide transporter 2 0.02 Orthogroups_2024-Update
84173 No alias peptide transporter 1 0.04 Orthogroups_2024-Update
91845 No alias peptide transporter 1 0.01 Orthogroups_2024-Update
A4A49_22839 No alias protein nrt1 ptr family 7.3 0.02 Orthogroups_2024-Update
Bradi1g75820 No alias peptide transporter 3 0.03 Orthogroups_2024-Update
Bradi3g28410 No alias peptide transporter 3 0.02 Orthogroups_2024-Update
Bradi4g17950 No alias peptide transporter 2 0.02 Orthogroups_2024-Update
Brara.G01280.1 No alias anion transporter *(NRT1/PTR) 0.03 Orthogroups_2024-Update
Glyma.01G200100 No alias nitrate transporter 1.5 0.02 Orthogroups_2024-Update
Glyma.11G176800 No alias peptide transporter 1 0.03 Orthogroups_2024-Update
HORVU1Hr1G053990.10 No alias nitrate transceptor *(NRT1.1) & anion transporter *(NRT1/PTR) 0.01 Orthogroups_2024-Update
HORVU5Hr1G099170.1 No alias anion transporter *(NRT1/PTR) 0.02 Orthogroups_2024-Update
HORVU6Hr1G070450.1 No alias anion transporter *(NRT1/PTR) 0.02 Orthogroups_2024-Update
LOC_Os01g65100 No alias peptide transporter, putative, expressed 0.02 Orthogroups_2024-Update
LOC_Os01g67630 No alias peptide transporter PTR2, putative, expressed 0.02 Orthogroups_2024-Update
LOC_Os02g48570 No alias peptide transporter PTR2, putative, expressed 0.02 Orthogroups_2024-Update
LOC_Os10g22560 No alias peptide transporter PTR2, putative, expressed 0.02 Orthogroups_2024-Update
MA_10437108g0010 No alias (at3g53960 : 463.0) Major facilitator superfamily... 0.03 Orthogroups_2024-Update
Mp6g04780.1 No alias anion transporter (NRT1/PTR) 0.02 Orthogroups_2024-Update
Mp7g01820.1 No alias anion transporter (NRT1/PTR) 0.02 Orthogroups_2024-Update
PSME_00017179-RA No alias (at3g54140 : 790.0) Encodes a di- and tri-peptide... 0.04 Orthogroups_2024-Update
PSME_00017196-RA No alias (at5g01180 : 407.0) Encodes a dipeptide transporter... 0.04 Orthogroups_2024-Update
PSME_00029510-RA No alias (at1g22540 : 522.0) Major facilitator superfamily... 0.03 Orthogroups_2024-Update
Potri.008G061100 No alias Major facilitator superfamily protein 0.03 Orthogroups_2024-Update
Seita.7G221900.1 No alias anion transporter *(NRT1/PTR) 0.03 Orthogroups_2024-Update
Seita.9G297800.1 No alias anion transporter *(NRT1/PTR) 0.02 Orthogroups_2024-Update
Sobic.003G392700.1 No alias anion transporter *(NRT1/PTR) 0.02 Orthogroups_2024-Update
Solyc12g042300 No alias Peptide transporter (AHRD V3.3 *** W9SG60_9ROSA) 0.04 Orthogroups_2024-Update
Sopen09g007100 No alias POT family 0.03 Orthogroups_2024-Update
Sopen10g025770 No alias POT family 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source
CC GO:0016020 membrane IEA InterProScan predictions
MF GO:0022857 transmembrane transporter activity IEA InterProScan predictions
BP GO:0055085 transmembrane transport IEA InterProScan predictions
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Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEP Predicted GO
MF GO:0004672 protein kinase activity IEP Predicted GO
MF GO:0005506 iron ion binding IEP Predicted GO
MF GO:0005515 protein binding IEP Predicted GO
BP GO:0006464 cellular protein modification process IEP Predicted GO
BP GO:0006468 protein phosphorylation IEP Predicted GO
BP GO:0006793 phosphorus metabolic process IEP Predicted GO
BP GO:0006796 phosphate-containing compound metabolic process IEP Predicted GO
BP GO:0006807 nitrogen compound metabolic process IEP Predicted GO
BP GO:0008152 metabolic process IEP Predicted GO
MF GO:0016301 kinase activity IEP Predicted GO
BP GO:0016310 phosphorylation IEP Predicted GO
MF GO:0016491 oxidoreductase activity IEP Predicted GO
MF GO:0016705 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen IEP Predicted GO
MF GO:0016772 transferase activity, transferring phosphorus-containing groups IEP Predicted GO
MF GO:0016773 phosphotransferase activity, alcohol group as acceptor IEP Predicted GO
BP GO:0019538 protein metabolic process IEP Predicted GO
BP GO:0036211 protein modification process IEP Predicted GO
BP GO:0043170 macromolecule metabolic process IEP Predicted GO
BP GO:0043412 macromolecule modification IEP Predicted GO
BP GO:0044238 primary metabolic process IEP Predicted GO
BP GO:0044260 cellular macromolecule metabolic process IEP Predicted GO
BP GO:0044267 cellular protein metabolic process IEP Predicted GO
MF GO:0048037 cofactor binding IEP Predicted GO
MF GO:0050661 NADP binding IEP Predicted GO
BP GO:0071704 organic substance metabolic process IEP Predicted GO
MF GO:0140096 catalytic activity, acting on a protein IEP Predicted GO
MF GO:1901265 nucleoside phosphate binding IEP Predicted GO
BP GO:1901564 organonitrogen compound metabolic process IEP Predicted GO
InterPro domains Description Start Stop
IPR000109 POT_fam 121 552
No external refs found!