Description : (at2g44050 : 103.0) 6,7-dimethyl-8-ribityllumazine synthase / DMRL synthase / lumazine synthase / riboflavin synthase [Arabidopsis thaliana]. Acts in the jasmonic acid signaling pathway.; COI1 SUPPRESSOR1 (COS1); FUNCTIONS IN: 6,7-dimethyl-8-ribityllumazine synthase activity; INVOLVED IN: riboflavin biosynthetic process, jasmonic acid mediated signaling pathway; LOCATED IN: chloroplast stroma, chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: 6,7-dimethyl-8-ribityllumazine synthase (InterPro:IPR002180), 6,7-dimethyl-8-ribityllumazine synthase, chloroplast (InterPro:IPR017420); Has 7351 Blast hits to 7351 proteins in 2325 species: Archae - 190; Bacteria - 4938; Metazoa - 2; Fungi - 209; Plants - 81; Viruses - 0; Other Eukaryotes - 1931 (source: NCBI BLink). & (q9xh32|risb_spiol : 89.0) 6,7-dimethyl-8-ribityllumazine synthase, chloroplast precursor (EC 2.5.1.9) (DMRL synthase) (Lumazine synthase) - Spinacia oleracea (Spinach) & (reliability: 206.0) & (original description: no original description)
Gene families : OG_42_0004327 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0004327_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
Type | Description | Actions |
---|---|---|
Neighborhood | Pseudotsuga release: PSME_00047658-RA | |
Cluster | HCCA clusters: Cluster_227 |
Target | Alias | Description | ECC score | Gene Family Method | Actions |
---|---|---|---|---|---|
Brara.C02241.1 | No alias | lumazine synthase *(RibE) & EC_2.5 transferase... | 0.03 | Orthogroups_2024-Update | |
HORVU2Hr1G085820.1 | No alias | lumazine synthase *(RibE) & EC_2.5 transferase... | 0.03 | Orthogroups_2024-Update | |
Sopen08g005770 | No alias | 6,7-dimethyl-8-ribityllumazine synthase | 0.04 | Orthogroups_2024-Update |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
BP | GO:0009231 | riboflavin biosynthetic process | IEA | InterProScan predictions |
CC | GO:0009349 | riboflavin synthase complex | IEA | InterProScan predictions |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0000155 | phosphorelay sensor kinase activity | IEP | Predicted GO |
BP | GO:0000726 | non-recombinational repair | IEP | Predicted GO |
MF | GO:0003885 | D-arabinono-1,4-lactone oxidase activity | IEP | Predicted GO |
MF | GO:0003909 | DNA ligase activity | IEP | Predicted GO |
MF | GO:0003910 | DNA ligase (ATP) activity | IEP | Predicted GO |
MF | GO:0004673 | protein histidine kinase activity | IEP | Predicted GO |
MF | GO:0005544 | calcium-dependent phospholipid binding | IEP | Predicted GO |
BP | GO:0006259 | DNA metabolic process | IEP | Predicted GO |
BP | GO:0006281 | DNA repair | IEP | Predicted GO |
BP | GO:0006302 | double-strand break repair | IEP | Predicted GO |
BP | GO:0006303 | double-strand break repair via nonhomologous end joining | IEP | Predicted GO |
BP | GO:0006310 | DNA recombination | IEP | Predicted GO |
BP | GO:0006974 | cellular response to DNA damage stimulus | IEP | Predicted GO |
BP | GO:0007165 | signal transduction | IEP | Predicted GO |
BP | GO:0009314 | response to radiation | IEP | Predicted GO |
BP | GO:0009416 | response to light stimulus | IEP | Predicted GO |
BP | GO:0009581 | detection of external stimulus | IEP | Predicted GO |
BP | GO:0009582 | detection of abiotic stimulus | IEP | Predicted GO |
BP | GO:0009583 | detection of light stimulus | IEP | Predicted GO |
BP | GO:0009584 | detection of visible light | IEP | Predicted GO |
BP | GO:0009605 | response to external stimulus | IEP | Predicted GO |
BP | GO:0009628 | response to abiotic stimulus | IEP | Predicted GO |
MF | GO:0016775 | phosphotransferase activity, nitrogenous group as acceptor | IEP | Predicted GO |
MF | GO:0016886 | ligase activity, forming phosphoric ester bonds | IEP | Predicted GO |
MF | GO:0016899 | oxidoreductase activity, acting on the CH-OH group of donors, oxygen as acceptor | IEP | Predicted GO |
BP | GO:0018298 | protein-chromophore linkage | IEP | Predicted GO |
BP | GO:0033554 | cellular response to stress | IEP | Predicted GO |
BP | GO:0050896 | response to stimulus | IEP | Predicted GO |
BP | GO:0051606 | detection of stimulus | IEP | Predicted GO |
BP | GO:0051716 | cellular response to stimulus | IEP | Predicted GO |
InterPro domains | Description | Start | Stop |
---|---|---|---|
IPR002180 | LS/RS | 36 | 111 |
No external refs found! |