1. Home
  2. Species
  3. Pseudotsuga menziesii
  4. Sequence
  5. PSME_00049126-RA

PSME_00049126-RA


Description : (at5g01180 : 160.0) Encodes a dipeptide transporter expressed in pollen and ovules during early seed development. GFP-tagged PTR5 localizes to the plasma membrane.; peptide transporter 5 (PTR5); CONTAINS InterPro DOMAIN/s: PTR2 family proton/oligopeptide symporter, conserved site (InterPro:IPR018456), Oligopeptide transporter (InterPro:IPR000109), Major facilitator superfamily, general substrate transporter (InterPro:IPR016196); BEST Arabidopsis thaliana protein match is: peptide transporter 1 (TAIR:AT3G54140.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 292.0) & (original description: no original description)


Gene families : OG_42_0007811 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0007811_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Pseudotsuga release: PSME_00049126-RA
Cluster HCCA clusters: Cluster_120

Target Alias Description ECC score Gene Family Method Actions
MA_119911g0010 No alias (at2g02040 : 208.0) Encodes a di- and tri-peptide... 0.04 Orthogroups_2024-Update
MA_121879g0010 No alias (at5g01180 : 103.0) Encodes a dipeptide transporter... 0.03 Orthogroups_2024-Update
MA_890077g0010 No alias no hits & (original description: no original description) 0.04 Orthogroups_2024-Update
Mp3g09240.1 No alias anion transporter (NRT1/PTR) 0.02 Orthogroups_2024-Update
Mp5g04910.1 No alias anion transporter (NRT1/PTR) 0.02 Orthogroups_2024-Update
Mp5g04940.1 No alias anion transporter (NRT1/PTR) 0.04 Orthogroups_2024-Update
PSME_00026500-RA No alias (at1g62200 : 168.0) Major facilitator superfamily... 0.04 Orthogroups_2024-Update

Type GO Term Name Evidence Source
CC GO:0016020 membrane IEA InterProScan predictions
MF GO:0022857 transmembrane transporter activity IEA InterProScan predictions
BP GO:0055085 transmembrane transport IEA InterProScan predictions
Toggle parental
Type GO Term Name Evidence Source
MF GO:0004553 hydrolase activity, hydrolyzing O-glycosyl compounds IEP Predicted GO
MF GO:0005319 lipid transporter activity IEP Predicted GO
MF GO:0005506 iron ion binding IEP Predicted GO
BP GO:0005975 carbohydrate metabolic process IEP Predicted GO
BP GO:0006508 proteolysis IEP Predicted GO
BP GO:0006869 lipid transport IEP Predicted GO
BP GO:0008152 metabolic process IEP Predicted GO
MF GO:0008233 peptidase activity IEP Predicted GO
MF GO:0008234 cysteine-type peptidase activity IEP Predicted GO
MF GO:0016705 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen IEP Predicted GO
MF GO:0016787 hydrolase activity IEP Predicted GO
MF GO:0016798 hydrolase activity, acting on glycosyl bonds IEP Predicted GO
MF GO:0020037 heme binding IEP Predicted GO
MF GO:0043565 sequence-specific DNA binding IEP Predicted GO
MF GO:0046906 tetrapyrrole binding IEP Predicted GO
MF GO:0046914 transition metal ion binding IEP Predicted GO
BP GO:0061024 membrane organization IEP Predicted GO
MF GO:0061630 ubiquitin protein ligase activity IEP Predicted GO
MF GO:0061659 ubiquitin-like protein ligase activity IEP Predicted GO
MF GO:0070011 peptidase activity, acting on L-amino acid peptides IEP Predicted GO
BP GO:0120009 intermembrane lipid transfer IEP Predicted GO
MF GO:0120013 intermembrane lipid transfer activity IEP Predicted GO
InterPro domains Description Start Stop
IPR000109 POT_fam 110 523
No external refs found!