1. Home
  2. Species
  3. Pseudotsuga menziesii
  4. Sequence
  5. PSME_00049434-RA

PSME_00049434-RA


Description : (at3g47090 : 130.0) Leucine-rich repeat protein kinase family protein; FUNCTIONS IN: protein serine/threonine kinase activity, kinase activity, ATP binding; INVOLVED IN: transmembrane receptor protein tyrosine kinase signaling pathway, protein amino acid phosphorylation; LOCATED IN: chloroplast; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Protein kinase, catalytic domain (InterPro:IPR000719), Leucine-rich repeat-containing N-terminal domain, type 2 (InterPro:IPR013210), Leucine-rich repeat (InterPro:IPR001611), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: Leucine-rich repeat protein kinase family protein (TAIR:AT3G47580.1); Has 208488 Blast hits to 131556 proteins in 4837 species: Archae - 167; Bacteria - 21304; Metazoa - 66210; Fungi - 9769; Plants - 86245; Viruses - 308; Other Eukaryotes - 24485 (source: NCBI BLink). & (p93194|rpk1_iponi : 85.5) Receptor-like protein kinase precursor (EC 2.7.11.1) - Ipomoea nil (Japanese morning glory) (Pharbitis nil) & (reliability: 260.0) & (original description: no original description)


Gene families : OG_42_0000007 (Orthogroups_2024-Update) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Pseudotsuga release: PSME_00049434-RA
Cluster HCCA clusters: Cluster_150

Target Alias Description ECC score Gene Family Method Actions
A4A49_36822 No alias lrr receptor-like serinethreonine-protein kinase fls2 0.03 Orthogroups_2024-Update
At2g24130 No alias Leucine-rich receptor-like protein kinase family protein... 0.03 Orthogroups_2024-Update
Bradi1g01985 No alias EF-TU receptor 0.03 Orthogroups_2024-Update
Bradi3g01783 No alias EF-TU receptor 0.03 Orthogroups_2024-Update
Bradi3g48760 No alias Leucine-rich repeat protein kinase family protein 0.03 Orthogroups_2024-Update
Bradi4g03660 No alias Leucine-rich repeat protein kinase family protein 0.03 Orthogroups_2024-Update
Bradi4g10998 No alias Leucine-rich repeat protein kinase family protein 0.02 Orthogroups_2024-Update
Bradi4g11740 No alias Leucine-rich repeat protein kinase family protein 0.02 Orthogroups_2024-Update
Bradi4g12990 No alias Leucine-rich repeat protein kinase family protein 0.03 Orthogroups_2024-Update
Bradi4g16068 No alias Leucine-rich repeat protein kinase family protein 0.02 Orthogroups_2024-Update
Glyma.02G206300 No alias Leucine-rich receptor-like protein kinase family protein 0.02 Orthogroups_2024-Update
Glyma.08G128900 No alias EF-TU receptor 0.02 Orthogroups_2024-Update
HORVU2Hr1G127100.9 No alias LRR-XII protein kinase & EC_2.7 transferase transferring... 0.04 Orthogroups_2024-Update
HORVU5Hr1G095120.2 No alias LRR-XII protein kinase & EC_2.7 transferase transferring... 0.02 Orthogroups_2024-Update
HORVU7Hr1G007520.1 No alias LRR-XII protein kinase & EC_2.7 transferase transferring... 0.03 Orthogroups_2024-Update
LOC_Os02g39660 No alias receptor kinase, putative, expressed 0.02 Orthogroups_2024-Update
LOC_Os10g19160 No alias receptor kinase, putative, expressed 0.02 Orthogroups_2024-Update
Mp3g14080.1 No alias Probable leucine-rich repeat receptor-like protein... 0.02 Orthogroups_2024-Update
PSME_00006646-RA No alias no hits & (original description: no original description) 0.05 Orthogroups_2024-Update
PSME_00032507-RA No alias (at5g46330 : 369.0) Encodes a leucine-rich repeat... 0.04 Orthogroups_2024-Update
PSME_00032810-RA No alias (at5g46330 : 206.0) Encodes a leucine-rich repeat... 0.04 Orthogroups_2024-Update
PSME_00040826-RA No alias (at5g63930 : 192.0) Leucine-rich repeat protein kinase... 0.04 Orthogroups_2024-Update
PSME_00042436-RA No alias (at5g46330 : 119.0) Encodes a leucine-rich repeat... 0.04 Orthogroups_2024-Update
PSME_00051160-RA No alias (at5g20480 : 127.0) Encodes a predicted leucine-rich... 0.04 Orthogroups_2024-Update
PSME_00054964-RA No alias (at5g62230 : 187.0) Encodes a receptor-like kinase that,... 0.05 Orthogroups_2024-Update
PSME_00055531-RA No alias (at5g46330 : 107.0) Encodes a leucine-rich repeat... 0.04 Orthogroups_2024-Update
PSME_00055533-RA No alias (at3g47110 : 628.0) Leucine-rich repeat protein kinase... 0.04 Orthogroups_2024-Update
Pp1s40_196V6 No alias leucine rich repeat-like protein 0.02 Orthogroups_2024-Update
Seita.1G185000.1 No alias EC_2.7 transferase transferring phosphorus-containing group 0.03 Orthogroups_2024-Update
Seita.4G046600.1 No alias LRR-XII protein kinase & EC_2.7 transferase transferring... 0.03 Orthogroups_2024-Update
Seita.4G230600.1 No alias LRR-XII protein kinase & EC_2.7 transferase transferring... 0.03 Orthogroups_2024-Update
Seita.4G231200.1 No alias LRR-XII protein kinase & EC_2.7 transferase transferring... 0.03 Orthogroups_2024-Update
Seita.5G106400.1 No alias Unknown function 0.03 Orthogroups_2024-Update
Seita.5G281200.1 No alias Unknown function 0.03 Orthogroups_2024-Update
Seita.5G281400.1 No alias LRR-XII protein kinase & EC_2.7 transferase transferring... 0.03 Orthogroups_2024-Update
Seita.6G034700.1 No alias LRR-XII protein kinase & EC_2.7 transferase transferring... 0.02 Orthogroups_2024-Update
Sobic.003G265900.1 No alias LRR-XII protein kinase & EC_2.7 transferase transferring... 0.03 Orthogroups_2024-Update
Sobic.008G065200.3 No alias EC_2.7 transferase transferring phosphorus-containing group 0.02 Orthogroups_2024-Update
Sobic.010G176700.1 No alias LRR-XII protein kinase & EC_2.7 transferase transferring... 0.02 Orthogroups_2024-Update
Solyc07g006770 No alias Receptor-like protein kinase (AHRD V3.3 *** RPK1_IPONI) 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA InterProScan predictions
Toggle parental
Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEP Predicted GO
MF GO:0000287 magnesium ion binding IEP Predicted GO
CC GO:0000502 proteasome complex IEP Predicted GO
MF GO:0004672 protein kinase activity IEP Predicted GO
MF GO:0005524 ATP binding IEP Predicted GO
BP GO:0006099 tricarboxylic acid cycle IEP Predicted GO
BP GO:0006101 citrate metabolic process IEP Predicted GO
BP GO:0006464 cellular protein modification process IEP Predicted GO
BP GO:0006468 protein phosphorylation IEP Predicted GO
BP GO:0006793 phosphorus metabolic process IEP Predicted GO
BP GO:0006796 phosphate-containing compound metabolic process IEP Predicted GO
BP GO:0006873 cellular ion homeostasis IEP Predicted GO
BP GO:0006875 cellular metal ion homeostasis IEP Predicted GO
BP GO:0006879 cellular iron ion homeostasis IEP Predicted GO
BP GO:0006888 ER to Golgi vesicle-mediated transport IEP Predicted GO
BP GO:0006890 retrograde vesicle-mediated transport, Golgi to ER IEP Predicted GO
MF GO:0008144 drug binding IEP Predicted GO
MF GO:0008199 ferric iron binding IEP Predicted GO
MF GO:0008964 phosphoenolpyruvate carboxylase activity IEP Predicted GO
BP GO:0009894 regulation of catabolic process IEP Predicted GO
MF GO:0010333 terpene synthase activity IEP Predicted GO
BP GO:0015977 carbon fixation IEP Predicted GO
BP GO:0016192 vesicle-mediated transport IEP Predicted GO
BP GO:0016197 endosomal transport IEP Predicted GO
MF GO:0016301 kinase activity IEP Predicted GO
BP GO:0016310 phosphorylation IEP Predicted GO
BP GO:0016482 cytosolic transport IEP Predicted GO
MF GO:0016772 transferase activity, transferring phosphorus-containing groups IEP Predicted GO
MF GO:0016773 phosphotransferase activity, alcohol group as acceptor IEP Predicted GO
MF GO:0016829 lyase activity IEP Predicted GO
MF GO:0016835 carbon-oxygen lyase activity IEP Predicted GO
MF GO:0016838 carbon-oxygen lyase activity, acting on phosphates IEP Predicted GO
BP GO:0016999 antibiotic metabolic process IEP Predicted GO
MF GO:0017076 purine nucleotide binding IEP Predicted GO
BP GO:0019725 cellular homeostasis IEP Predicted GO
CC GO:0019867 outer membrane IEP Predicted GO
BP GO:0030003 cellular cation homeostasis IEP Predicted GO
CC GO:0030120 vesicle coat IEP Predicted GO
CC GO:0030127 COPII vesicle coat IEP Predicted GO
MF GO:0030554 adenyl nucleotide binding IEP Predicted GO
MF GO:0030976 thiamine pyrophosphate binding IEP Predicted GO
MF GO:0032553 ribonucleotide binding IEP Predicted GO
MF GO:0032555 purine ribonucleotide binding IEP Predicted GO
MF GO:0032559 adenyl ribonucleotide binding IEP Predicted GO
MF GO:0035639 purine ribonucleoside triphosphate binding IEP Predicted GO
MF GO:0036094 small molecule binding IEP Predicted GO
BP GO:0036211 protein modification process IEP Predicted GO
BP GO:0042147 retrograde transport, endosome to Golgi IEP Predicted GO
BP GO:0042176 regulation of protein catabolic process IEP Predicted GO
BP GO:0042592 homeostatic process IEP Predicted GO
MF GO:0043167 ion binding IEP Predicted GO
MF GO:0043168 anion binding IEP Predicted GO
MF GO:0043169 cation binding IEP Predicted GO
BP GO:0043412 macromolecule modification IEP Predicted GO
BP GO:0044267 cellular protein metabolic process IEP Predicted GO
CC GO:0044433 cytoplasmic vesicle part IEP Predicted GO
MF GO:0046872 metal ion binding IEP Predicted GO
BP GO:0046916 cellular transition metal ion homeostasis IEP Predicted GO
BP GO:0048193 Golgi vesicle transport IEP Predicted GO
BP GO:0048878 chemical homeostasis IEP Predicted GO
BP GO:0050801 ion homeostasis IEP Predicted GO
BP GO:0055065 metal ion homeostasis IEP Predicted GO
BP GO:0055072 iron ion homeostasis IEP Predicted GO
BP GO:0055076 transition metal ion homeostasis IEP Predicted GO
BP GO:0055080 cation homeostasis IEP Predicted GO
BP GO:0055082 cellular chemical homeostasis IEP Predicted GO
BP GO:0065007 biological regulation IEP Predicted GO
BP GO:0065008 regulation of biological quality IEP Predicted GO
BP GO:0072350 tricarboxylic acid metabolic process IEP Predicted GO
MF GO:0097367 carbohydrate derivative binding IEP Predicted GO
BP GO:0098771 inorganic ion homeostasis IEP Predicted GO
MF GO:1901265 nucleoside phosphate binding IEP Predicted GO
MF GO:1901681 sulfur compound binding IEP Predicted GO
CC GO:1905368 peptidase complex IEP Predicted GO
CC GO:1905369 endopeptidase complex IEP Predicted GO
InterPro domains Description Start Stop
IPR013210 LRR_N_plant-typ 66 104
IPR001611 Leu-rich_rpt 158 217
No external refs found!