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  5. PSME_00050854-RA

PSME_00050854-RA


Description : (at2g02240 : 154.0) maternal effect embryo arrest 66 (MEE66); CONTAINS InterPro DOMAIN/s: F-box domain, cyclin-like (InterPro:IPR001810), F-box domain, Skp2-like (InterPro:IPR022364); BEST Arabidopsis thaliana protein match is: phloem protein 2-B2 (TAIR:AT2G02250.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 302.0) & (original description: no original description)


Gene families : OG_42_0000141 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000141_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Pseudotsuga release: PSME_00050854-RA
Cluster HCCA clusters: Cluster_14

Target Alias Description ECC score Gene Family Method Actions
A4A49_40198 No alias f-box protein 0.02 Orthogroups_2024-Update
At2g02300 No alias F-box protein PP2-B5 [Source:UniProtKB/Swiss-Prot;Acc:Q9ZVR1] 0.02 Orthogroups_2024-Update
At5g45090 No alias Uncharacterized protein PHLOEM PROTEIN 2-LIKE A7... 0.03 Orthogroups_2024-Update
Bradi1g48286 No alias phloem protein 2-B1 0.03 Orthogroups_2024-Update
Bradi3g17208 No alias phloem protein 2-B10 0.03 Orthogroups_2024-Update
Brara.B03096.1 No alias Unknown function 0.03 Orthogroups_2024-Update
Brara.B03100.1 No alias Unknown function 0.03 Orthogroups_2024-Update
Brara.F03422.1 No alias Unknown function 0.03 Orthogroups_2024-Update
Glyma.03G233900 No alias phloem protein 2-B15 0.02 Orthogroups_2024-Update
Glyma.07G222500 No alias phloem protein 2-A1 0.02 Orthogroups_2024-Update
Glyma.14G073300 No alias phloem protein 2-B10 0.05 Orthogroups_2024-Update
HORVU4Hr1G021480.1 No alias Unknown function 0.03 Orthogroups_2024-Update
MA_22084g0010 No alias (at2g02240 : 194.0) maternal effect embryo arrest 66... 0.02 Orthogroups_2024-Update
MA_227118g0010 No alias (at2g02340 : 82.4) phloem protein 2-B8 (PP2-B8);... 0.03 Orthogroups_2024-Update
MA_413510g0010 No alias (at1g09155 : 172.0) phloem protein 2-B15 (PP2-B15);... 0.04 Orthogroups_2024-Update
MA_7604366g0010 No alias (at1g80110 : 163.0) phloem protein 2-B11 (PP2-B11);... 0.05 Orthogroups_2024-Update
Mp1g08220.1 No alias F-box protein PP2-A15 OS=Arabidopsis thaliana... 0.02 Orthogroups_2024-Update
PSME_00043920-RA No alias (at1g09155 : 152.0) phloem protein 2-B15 (PP2-B15);... 0.04 Orthogroups_2024-Update
PSME_00051269-RA No alias (at2g02230 : 140.0) phloem protein 2-B1 (PP2-B1);... 0.04 Orthogroups_2024-Update
PSME_00053226-RA No alias (at2g02230 : 145.0) phloem protein 2-B1 (PP2-B1);... 0.05 Orthogroups_2024-Update
Potri.013G012600 No alias phloem protein 2-B15 0.02 Orthogroups_2024-Update
Seita.6G063500.1 No alias Unknown function 0.03 Orthogroups_2024-Update
Seita.7G060500.1 No alias Unknown function 0.03 Orthogroups_2024-Update
Sobic.004G341100.2 No alias Unknown function 0.02 Orthogroups_2024-Update
Sobic.005G119100.1 No alias Unknown function 0.03 Orthogroups_2024-Update
Solyc11g006740 No alias F-box protein PP2 (AHRD V3.3 *** A0A059PC27_CICAR) 0.02 Orthogroups_2024-Update
Solyc12g098190 No alias F-box family protein (AHRD V3.3 *** AT2G02240.1) 0.03 Orthogroups_2024-Update
Sopen12g023290 No alias Phloem protein 2 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA InterProScan predictions
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Type GO Term Name Evidence Source
MF GO:0004601 peroxidase activity IEP Predicted GO
MF GO:0005506 iron ion binding IEP Predicted GO
BP GO:0006950 response to stress IEP Predicted GO
BP GO:0006979 response to oxidative stress IEP Predicted GO
BP GO:0007062 sister chromatid cohesion IEP Predicted GO
BP GO:0007064 mitotic sister chromatid cohesion IEP Predicted GO
MF GO:0015399 primary active transmembrane transporter activity IEP Predicted GO
MF GO:0015405 P-P-bond-hydrolysis-driven transmembrane transporter activity IEP Predicted GO
MF GO:0016209 antioxidant activity IEP Predicted GO
MF GO:0016491 oxidoreductase activity IEP Predicted GO
MF GO:0016684 oxidoreductase activity, acting on peroxide as acceptor IEP Predicted GO
MF GO:0016831 carboxy-lyase activity IEP Predicted GO
MF GO:0020037 heme binding IEP Predicted GO
BP GO:0022402 cell cycle process IEP Predicted GO
CC GO:0031390 Ctf18 RFC-like complex IEP Predicted GO
MF GO:0033926 glycopeptide alpha-N-acetylgalactosaminidase activity IEP Predicted GO
MF GO:0042623 ATPase activity, coupled IEP Predicted GO
MF GO:0042626 ATPase activity, coupled to transmembrane movement of substances IEP Predicted GO
MF GO:0043492 ATPase activity, coupled to movement of substances IEP Predicted GO
MF GO:0046906 tetrapyrrole binding IEP Predicted GO
MF GO:0048037 cofactor binding IEP Predicted GO
MF GO:0050662 coenzyme binding IEP Predicted GO
BP GO:0050896 response to stimulus IEP Predicted GO
BP GO:0051276 chromosome organization IEP Predicted GO
BP GO:0055114 oxidation-reduction process IEP Predicted GO
MF GO:0140103 catalytic activity, acting on a glycoprotein IEP Predicted GO
BP GO:1903047 mitotic cell cycle process IEP Predicted GO
InterPro domains Description Start Stop
IPR001810 F-box_dom 13 56
IPR025886 PP2-like 106 273
No external refs found!