Description : (at5g27030 : 164.0) TOPLESS-related 3 (TPR3); FUNCTIONS IN: protein binding; INVOLVED IN: primary shoot apical meristem specification; LOCATED IN: endomembrane system; CONTAINS InterPro DOMAIN/s: WD40 repeat 2 (InterPro:IPR019782), WD40 repeat, conserved site (InterPro:IPR019775), WD40 repeat (InterPro:IPR001680), CTLH, C-terminal LisH motif (InterPro:IPR006595), WD40 repeat-like-containing domain (InterPro:IPR011046), WD40-repeat-containing domain (InterPro:IPR017986), WD40/YVTN repeat-like-containing domain (InterPro:IPR015943), LisH dimerisation motif (InterPro:IPR006594), WD40 repeat, subgroup (InterPro:IPR019781); BEST Arabidopsis thaliana protein match is: TOPLESS-related 2 (TAIR:AT3G16830.1). & (reliability: 328.0) & (original description: no original description)
Gene families : OG_42_0000373 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000373_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
Type | Description | Actions |
---|---|---|
Neighborhood | Pseudotsuga release: PSME_00051286-RA | |
Cluster | HCCA clusters: Cluster_231 |
Target | Alias | Description | ECC score | Gene Family Method | Actions |
---|---|---|---|---|---|
HORVU7Hr1G066930.5 | No alias | transcriptional co-repressor *(TPL/TPR) & auxin... | 0.03 | Orthogroups_2024-Update | |
PSME_00044737-RA | No alias | (at1g15750 : 218.0) Encodes a protein with several WD40... | 0.05 | Orthogroups_2024-Update | |
Potri.018G023800 | No alias | TOPLESS-related 1 | 0.03 | Orthogroups_2024-Update | |
Sopen03g035660 | No alias | WD domain, G-beta repeat | 0.03 | Orthogroups_2024-Update |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
No GO annotation available for this sequence |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
BP | GO:0006364 | rRNA processing | IEP | Predicted GO |
BP | GO:0006396 | RNA processing | IEP | Predicted GO |
BP | GO:0006643 | membrane lipid metabolic process | IEP | Predicted GO |
BP | GO:0006644 | phospholipid metabolic process | IEP | Predicted GO |
BP | GO:0006664 | glycolipid metabolic process | IEP | Predicted GO |
BP | GO:0006793 | phosphorus metabolic process | IEP | Predicted GO |
BP | GO:0006796 | phosphate-containing compound metabolic process | IEP | Predicted GO |
MF | GO:0008173 | RNA methyltransferase activity | IEP | Predicted GO |
BP | GO:0008654 | phospholipid biosynthetic process | IEP | Predicted GO |
MF | GO:0008915 | lipid-A-disaccharide synthase activity | IEP | Predicted GO |
BP | GO:0009245 | lipid A biosynthetic process | IEP | Predicted GO |
BP | GO:0009247 | glycolipid biosynthetic process | IEP | Predicted GO |
BP | GO:0009312 | oligosaccharide biosynthetic process | IEP | Predicted GO |
BP | GO:0016072 | rRNA metabolic process | IEP | Predicted GO |
CC | GO:0030684 | preribosome | IEP | Predicted GO |
CC | GO:0032040 | small-subunit processome | IEP | Predicted GO |
BP | GO:0046467 | membrane lipid biosynthetic process | IEP | Predicted GO |
BP | GO:0046493 | lipid A metabolic process | IEP | Predicted GO |
MF | GO:0071949 | FAD binding | IEP | Predicted GO |
BP | GO:1901269 | lipooligosaccharide metabolic process | IEP | Predicted GO |
BP | GO:1901271 | lipooligosaccharide biosynthetic process | IEP | Predicted GO |
BP | GO:1903509 | liposaccharide metabolic process | IEP | Predicted GO |
No InterPro domains available for this sequence
No external refs found! |