Description : (at5g20630 : 236.0) Encodes a germin-like protein. Its transcripts are more abundant in RNA from leaves collected in the evening, suggesting some kind of circadian regulation.; germin 3 (GER3); INVOLVED IN: response to cold, peptidyl-cysteine S-nitrosylation; LOCATED IN: extracellular matrix, apoplast, cell wall, nucleus, plant-type cell wall; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Cupin, RmlC-type (InterPro:IPR011051), Cupin 1 (InterPro:IPR006045), RmlC-like jelly roll fold (InterPro:IPR014710), Germin (InterPro:IPR001929), Germin, manganese binding site (InterPro:IPR019780); BEST Arabidopsis thaliana protein match is: germin-like protein 1 (TAIR:AT1G72610.1); Has 1486 Blast hits to 1484 proteins in 101 species: Archae - 0; Bacteria - 34; Metazoa - 0; Fungi - 23; Plants - 1414; Viruses - 0; Other Eukaryotes - 15 (source: NCBI BLink). & (o04011|abp20_prupe : 230.0) Auxin-binding protein ABP20 precursor - Prunus persica (Peach) & (reliability: 472.0) & (original description: no original description)
Gene families : OG_42_0000022 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000022_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
Type | Description | Actions |
---|---|---|
Neighborhood | Pseudotsuga release: PSME_00052809-RA | |
Cluster | HCCA clusters: Cluster_1 |
Target | Alias | Description | ECC score | Gene Family Method | Actions |
---|---|---|---|---|---|
227274 | No alias | Function unknown | 0.04 | Orthogroups_2024-Update | |
229376 | No alias | RmlC-like cupins superfamily protein | 0.03 | Orthogroups_2024-Update | |
446428 | No alias | RmlC-like cupins superfamily protein | 0.04 | Orthogroups_2024-Update | |
At3g10080 | No alias | RmlC-like cupins superfamily protein... | 0.04 | Orthogroups_2024-Update | |
Bradi2g60870 | No alias | germin-like protein subfamily 2 member 2 precursor | 0.03 | Orthogroups_2024-Update | |
Bradi3g44880 | No alias | RmlC-like cupins superfamily protein | 0.02 | Orthogroups_2024-Update | |
Glyma.16G061400 | No alias | RmlC-like cupins superfamily protein | 0.03 | Orthogroups_2024-Update | |
Glyma.19G058900 | No alias | RmlC-like cupins superfamily protein | 0.04 | Orthogroups_2024-Update | |
Glyma.19G059100 | No alias | RmlC-like cupins superfamily protein | 0.04 | Orthogroups_2024-Update | |
Glyma.19G059200 | No alias | RmlC-like cupins superfamily protein | 0.04 | Orthogroups_2024-Update | |
Kfl00453_0190 | kfl00453_0190_v1.1 | no hits & (original description: no original description) | 0.02 | Orthogroups_2024-Update | |
Sobic.004G148000.1 | No alias | Unknown function | 0.03 | Orthogroups_2024-Update | |
Sobic.007G066808.1 | No alias | Unknown function | 0.03 | Orthogroups_2024-Update | |
Sobic.007G067108.1 | No alias | Unknown function | 0.03 | Orthogroups_2024-Update | |
Sobic.007G067608.1 | No alias | Unknown function | 0.03 | Orthogroups_2024-Update |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0045735 | nutrient reservoir activity | IEA | InterProScan predictions |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0003824 | catalytic activity | IEP | Predicted GO |
MF | GO:0004601 | peroxidase activity | IEP | Predicted GO |
MF | GO:0005506 | iron ion binding | IEP | Predicted GO |
BP | GO:0006950 | response to stress | IEP | Predicted GO |
BP | GO:0006979 | response to oxidative stress | IEP | Predicted GO |
BP | GO:0008152 | metabolic process | IEP | Predicted GO |
MF | GO:0016209 | antioxidant activity | IEP | Predicted GO |
MF | GO:0016491 | oxidoreductase activity | IEP | Predicted GO |
MF | GO:0016684 | oxidoreductase activity, acting on peroxide as acceptor | IEP | Predicted GO |
MF | GO:0016705 | oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen | IEP | Predicted GO |
MF | GO:0020037 | heme binding | IEP | Predicted GO |
MF | GO:0043169 | cation binding | IEP | Predicted GO |
MF | GO:0046872 | metal ion binding | IEP | Predicted GO |
MF | GO:0046906 | tetrapyrrole binding | IEP | Predicted GO |
MF | GO:0046914 | transition metal ion binding | IEP | Predicted GO |
MF | GO:0048037 | cofactor binding | IEP | Predicted GO |
BP | GO:0050896 | response to stimulus | IEP | Predicted GO |
BP | GO:0055114 | oxidation-reduction process | IEP | Predicted GO |
InterPro domains | Description | Start | Stop |
---|---|---|---|
IPR006045 | Cupin_1 | 60 | 205 |
No external refs found! |