Description : (q6q9i1|mads7_orysa : 100.0) MADS-box transcription factor 7 (OsMADS7) (Protein AGAMOUS-like 6) (MADS-box protein 45) (OsMADS45) (FDRMADS1) (RMADS216) - Oryza sativa (Rice) & (at1g24260 : 94.4) Member of the MADs box transcription factor family. SEP3 is redundant with SEP1 and 2. Flowers of SEP1/2/3 triple mutants show a conversion of petals and stamens to sepals.SEP3 forms heterotetrameric complexes with other MADS box family members and binds to the CArG box motif.; SEPALLATA3 (SEP3); CONTAINS InterPro DOMAIN/s: Transcription factor, MADS-box (InterPro:IPR002100), Transcription factor, K-box (InterPro:IPR002487); BEST Arabidopsis thaliana protein match is: K-box region and MADS-box transcription factor family protein (TAIR:AT3G02310.1). & (reliability: 188.8) & (original description: no original description)
Gene families : OG_42_0000009 (Orthogroups_2024-Update) Phylogenetic Tree(s): No tree available for this family
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
Type | Description | Actions |
---|---|---|
Neighborhood | Pseudotsuga release: PSME_00053030-RA | |
Cluster | HCCA clusters: Cluster_169 |
Target | Alias | Description | ECC score | Gene Family Method | Actions |
---|---|---|---|---|---|
At1g77980 | No alias | Agamous-like MADS-box protein AGL66... | 0.02 | Orthogroups_2024-Update | |
Bradi4g06867 | No alias | K-box region and MADS-box transcription factor family protein | 0.02 | Orthogroups_2024-Update | |
Brara.I00639.1 | No alias | regulatory protein *(AP1/CAL/FUL) of floral meristem... | 0.02 | Orthogroups_2024-Update | |
LOC_Os02g36924 | No alias | OsMADS27 - MADS-box family gene with MIKCc type-box, expressed | 0.03 | Orthogroups_2024-Update | |
Pp1s37_353V6 | No alias | mads box | 0.01 | Orthogroups_2024-Update | |
Pp1s81_202V6 | No alias | mads box | 0.01 | Orthogroups_2024-Update | |
Seita.1G209300.1 | No alias | MADS/AGL-type transcription factor | 0.01 | Orthogroups_2024-Update | |
Sobic.001G086500.1 | No alias | regulatory protein *(AP1/CAL/FUL) of floral meristem... | 0.02 | Orthogroups_2024-Update | |
Sobic.009G102200.2 | No alias | MADS/AGL-type transcription factor | 0.01 | Orthogroups_2024-Update | |
Solyc06g069430 | No alias | FRUITFULL-like MADS-box 1 | 0.02 | Orthogroups_2024-Update | |
Sopen01g049040 | No alias | SRF-type transcription factor (DNA-binding and... | 0.02 | Orthogroups_2024-Update |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0003677 | DNA binding | IEA | InterProScan predictions |
MF | GO:0046983 | protein dimerization activity | IEA | InterProScan predictions |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0001882 | nucleoside binding | IEP | Predicted GO |
MF | GO:0001883 | purine nucleoside binding | IEP | Predicted GO |
MF | GO:0003924 | GTPase activity | IEP | Predicted GO |
MF | GO:0004150 | dihydroneopterin aldolase activity | IEP | Predicted GO |
MF | GO:0004488 | methylenetetrahydrofolate dehydrogenase (NADP+) activity | IEP | Predicted GO |
MF | GO:0004665 | prephenate dehydrogenase (NADP+) activity | IEP | Predicted GO |
MF | GO:0004743 | pyruvate kinase activity | IEP | Predicted GO |
MF | GO:0005525 | GTP binding | IEP | Predicted GO |
BP | GO:0006570 | tyrosine metabolic process | IEP | Predicted GO |
BP | GO:0006571 | tyrosine biosynthetic process | IEP | Predicted GO |
BP | GO:0006732 | coenzyme metabolic process | IEP | Predicted GO |
BP | GO:0006760 | folic acid-containing compound metabolic process | IEP | Predicted GO |
MF | GO:0008977 | prephenate dehydrogenase (NAD+) activity | IEP | Predicted GO |
BP | GO:0009095 | aromatic amino acid family biosynthetic process, prephenate pathway | IEP | Predicted GO |
CC | GO:0009523 | photosystem II | IEP | Predicted GO |
CC | GO:0009654 | photosystem II oxygen evolving complex | IEP | Predicted GO |
MF | GO:0016628 | oxidoreductase activity, acting on the CH-CH group of donors, NAD or NADP as acceptor | IEP | Predicted GO |
MF | GO:0016646 | oxidoreductase activity, acting on the CH-NH group of donors, NAD or NADP as acceptor | IEP | Predicted GO |
MF | GO:0016832 | aldehyde-lyase activity | IEP | Predicted GO |
MF | GO:0019001 | guanyl nucleotide binding | IEP | Predicted GO |
MF | GO:0030955 | potassium ion binding | IEP | Predicted GO |
MF | GO:0031420 | alkali metal ion binding | IEP | Predicted GO |
MF | GO:0032549 | ribonucleoside binding | IEP | Predicted GO |
MF | GO:0032550 | purine ribonucleoside binding | IEP | Predicted GO |
MF | GO:0032561 | guanyl ribonucleotide binding | IEP | Predicted GO |
BP | GO:0042558 | pteridine-containing compound metabolic process | IEP | Predicted GO |
CC | GO:1990204 | oxidoreductase complex | IEP | Predicted GO |
InterPro domains | Description | Start | Stop |
---|---|---|---|
IPR002100 | TF_MADSbox | 11 | 57 |
No external refs found! |