PSME_00053239-RA


Description : (at4g20140 : 438.0) Encodes GASSHO1 (GSO1), a putative leucine-rich repeat transmembrane-type receptor kinase. GSO1 and a homolog GSO2 (At5g44700) are required for the formation of a normal epidermal surface during embryogenesis.; GASSHO1 (GSO1); FUNCTIONS IN: protein serine/threonine kinase activity, protein kinase activity, ATP binding; INVOLVED IN: protein amino acid phosphorylation, transmembrane receptor protein tyrosine kinase signaling pathway, embryo development, epidermis development; LOCATED IN: endomembrane system; EXPRESSED IN: 13 plant structures; EXPRESSED DURING: 8 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Protein kinase, catalytic domain (InterPro:IPR000719), Leucine-rich repeat-containing N-terminal domain, type 2 (InterPro:IPR013210), Leucine-rich repeat (InterPro:IPR001611), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: Leucine-rich repeat transmembrane protein kinase (TAIR:AT5G44700.1); Has 301150 Blast hits to 144127 proteins in 5007 species: Archae - 193; Bacteria - 28594; Metazoa - 96322; Fungi - 11667; Plants - 129816; Viruses - 411; Other Eukaryotes - 34147 (source: NCBI BLink). & (p93194|rpk1_iponi : 314.0) Receptor-like protein kinase precursor (EC 2.7.11.1) - Ipomoea nil (Japanese morning glory) (Pharbitis nil) & (reliability: 876.0) & (original description: no original description)


Gene families : OG_42_0000007 (Orthogroups_2024-Update) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Pseudotsuga release: PSME_00053239-RA
Cluster HCCA clusters: Cluster_150

Target Alias Description ECC score Gene Family Method Actions
405170 No alias ERECTA-like 1 0.03 Orthogroups_2024-Update
432388 No alias Leucine-rich repeat (LRR) family protein 0.04 Orthogroups_2024-Update
A4A49_28840 No alias putative receptor-like protein kinase 0.02 Orthogroups_2024-Update
A4A49_38480 No alias putative lrr receptor-like serinethreonine-protein kinase 0.02 Orthogroups_2024-Update
GRMZM2G084248 No alias Leucine-rich receptor-like protein kinase family protein 0.02 Orthogroups_2024-Update
GRMZM2G162829 No alias Leucine-rich repeat protein kinase family protein 0.03 Orthogroups_2024-Update
Glyma.08G128800 No alias EF-TU receptor 0.03 Orthogroups_2024-Update
Glyma.09G217200 No alias Leucine-rich repeat protein kinase family protein 0.02 Orthogroups_2024-Update
HORVU4Hr1G085390.3 No alias LRR-XII protein kinase & EC_2.7 transferase transferring... 0.03 Orthogroups_2024-Update
LOC_Os02g40240 No alias receptor kinase, putative, expressed 0.03 Orthogroups_2024-Update
LOC_Os11g07270 No alias expressed protein 0.03 Orthogroups_2024-Update
LOC_Os11g29790 No alias receptor kinase, putative, expressed 0.03 Orthogroups_2024-Update
LOC_Os11g40840 No alias receptor-like protein kinase 2 precursor, putative, expressed 0.02 Orthogroups_2024-Update
LOC_Os11g47310 No alias receptor kinase-like protein, identical, putative, expressed 0.02 Orthogroups_2024-Update
MA_10429806g0010 No alias no hits & (original description: no original description) 0.04 Orthogroups_2024-Update
MA_13546g0010 No alias (at5g20480 : 145.0) Encodes a predicted leucine-rich... 0.06 Orthogroups_2024-Update
MA_161654g0010 No alias (at2g24130 : 293.0) Leucine-rich receptor-like protein... 0.03 Orthogroups_2024-Update
MA_8334663g0010 No alias (at5g20480 : 141.0) Encodes a predicted leucine-rich... 0.04 Orthogroups_2024-Update
PSME_00006646-RA No alias no hits & (original description: no original description) 0.05 Orthogroups_2024-Update
PSME_00008693-RA No alias (at3g47570 : 355.0) Leucine-rich repeat protein kinase... 0.03 Orthogroups_2024-Update
PSME_00011167-RA No alias (at4g08850 : 300.0) Leucine-rich repeat receptor-like... 0.05 Orthogroups_2024-Update
PSME_00015358-RA No alias (at5g20480 : 637.0) Encodes a predicted leucine-rich... 0.03 Orthogroups_2024-Update
PSME_00016355-RA No alias (at3g47570 : 606.0) Leucine-rich repeat protein kinase... 0.06 Orthogroups_2024-Update
PSME_00021673-RA No alias (at4g20140 : 410.0) Encodes GASSHO1 (GSO1), a putative... 0.03 Orthogroups_2024-Update
PSME_00031122-RA No alias (at5g46330 : 295.0) Encodes a leucine-rich repeat... 0.04 Orthogroups_2024-Update
PSME_00041027-RA No alias (at3g24240 : 280.0) Leucine-rich repeat receptor-like... 0.03 Orthogroups_2024-Update
PSME_00042436-RA No alias (at5g46330 : 119.0) Encodes a leucine-rich repeat... 0.04 Orthogroups_2024-Update
PSME_00046894-RA No alias (at5g46330 : 162.0) Encodes a leucine-rich repeat... 0.03 Orthogroups_2024-Update
PSME_00050999-RA No alias (at5g46330 : 144.0) Encodes a leucine-rich repeat... 0.04 Orthogroups_2024-Update
Potri.011G103000 No alias Leucine-rich repeat protein kinase family protein 0.03 Orthogroups_2024-Update
Potri.016G029900 No alias Leucine-rich repeat protein kinase family protein 0.02 Orthogroups_2024-Update
Potri.017G150800 No alias EF-TU receptor 0.02 Orthogroups_2024-Update
Potri.017G152200 No alias Leucine-rich repeat protein kinase family protein 0.02 Orthogroups_2024-Update
Potri.T176800 No alias Leucine-rich repeat protein kinase family protein 0.03 Orthogroups_2024-Update
Seita.1G038500.1 No alias LRR-XII protein kinase & EC_2.7 transferase transferring... 0.02 Orthogroups_2024-Update
Seita.4G046600.1 No alias LRR-XII protein kinase & EC_2.7 transferase transferring... 0.02 Orthogroups_2024-Update
Seita.4G231200.1 No alias LRR-XII protein kinase & EC_2.7 transferase transferring... 0.04 Orthogroups_2024-Update
Seita.5G105100.1 No alias EC_2.7 transferase transferring phosphorus-containing group 0.03 Orthogroups_2024-Update
Seita.6G035000.1 No alias EC_2.7 transferase transferring phosphorus-containing group 0.02 Orthogroups_2024-Update
Seita.8G118900.1 No alias LRR-XII protein kinase & EC_2.7 transferase transferring... 0.02 Orthogroups_2024-Update
Sobic.002G075400.2 No alias EC_2.7 transferase transferring phosphorus-containing group 0.02 Orthogroups_2024-Update
Sobic.004G214800.2 No alias Unknown function 0.02 Orthogroups_2024-Update
Sobic.005G057700.1 No alias LRR-XII protein kinase & EC_2.7 transferase transferring... 0.03 Orthogroups_2024-Update
Sobic.005G116700.1 No alias EC_2.7 transferase transferring phosphorus-containing group 0.04 Orthogroups_2024-Update
Sobic.008G175032.1 No alias LRR-XII protein kinase & EC_2.7 transferase transferring... 0.04 Orthogroups_2024-Update
Sobic.009G040175.1 No alias Unknown function 0.03 Orthogroups_2024-Update
Sobic.010G067400.1 No alias LRR-XII protein kinase & EC_2.7 transferase transferring... 0.02 Orthogroups_2024-Update
Solyc02g072480 No alias LRR receptor-like kinase (AHRD V3.3 *** A0A072V4N4_MEDTR) 0.02 Orthogroups_2024-Update
Solyc04g015980 No alias Non-specific serine/threonine protein kinase (AHRD V3.3... 0.03 Orthogroups_2024-Update
Sopen02g021350 No alias Leucine Rich repeats (2 copies) 0.06 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA InterProScan predictions
Type GO Term Name Evidence Source
MF GO:0004650 polygalacturonase activity IEP Predicted GO
MF GO:0004672 protein kinase activity IEP Predicted GO
BP GO:0006464 cellular protein modification process IEP Predicted GO
BP GO:0006468 protein phosphorylation IEP Predicted GO
BP GO:0006793 phosphorus metabolic process IEP Predicted GO
BP GO:0006796 phosphate-containing compound metabolic process IEP Predicted GO
MF GO:0016301 kinase activity IEP Predicted GO
BP GO:0016310 phosphorylation IEP Predicted GO
MF GO:0016740 transferase activity IEP Predicted GO
MF GO:0016757 transferase activity, transferring glycosyl groups IEP Predicted GO
MF GO:0016758 transferase activity, transferring hexosyl groups IEP Predicted GO
MF GO:0016772 transferase activity, transferring phosphorus-containing groups IEP Predicted GO
MF GO:0016773 phosphotransferase activity, alcohol group as acceptor IEP Predicted GO
BP GO:0019538 protein metabolic process IEP Predicted GO
BP GO:0036211 protein modification process IEP Predicted GO
BP GO:0043412 macromolecule modification IEP Predicted GO
BP GO:0044260 cellular macromolecule metabolic process IEP Predicted GO
BP GO:0044267 cellular protein metabolic process IEP Predicted GO
MF GO:0140096 catalytic activity, acting on a protein IEP Predicted GO
BP GO:1901564 organonitrogen compound metabolic process IEP Predicted GO
InterPro domains Description Start Stop
IPR001611 Leu-rich_rpt 746 806
IPR001611 Leu-rich_rpt 528 586
IPR001611 Leu-rich_rpt 865 924
IPR001611 Leu-rich_rpt 457 515
IPR001611 Leu-rich_rpt 996 1055
IPR001611 Leu-rich_rpt 289 347
IPR013210 LRR_N_plant-typ 171 210
No external refs found!