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  5. PSME_00053796-RA

PSME_00053796-RA


Description : (at1g69550 : 180.0) disease resistance protein (TIR-NBS-LRR class); FUNCTIONS IN: transmembrane receptor activity, nucleoside-triphosphatase activity, nucleotide binding, ATP binding; INVOLVED IN: signal transduction, defense response, apoptosis, innate immune response; LOCATED IN: intrinsic to membrane, endomembrane system; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: ATPase, AAA+ type, core (InterPro:IPR003593), NB-ARC (InterPro:IPR002182), Leucine-rich repeat (InterPro:IPR001611), Disease resistance protein (InterPro:IPR000767), Toll-Interleukin receptor (InterPro:IPR000157); BEST Arabidopsis thaliana protein match is: Disease resistance protein (TIR-NBS-LRR class) (TAIR:AT5G11250.1); Has 8455 Blast hits to 8197 proteins in 261 species: Archae - 0; Bacteria - 113; Metazoa - 3; Fungi - 4; Plants - 8303; Viruses - 0; Other Eukaryotes - 32 (source: NCBI BLink). & (reliability: 360.0) & (original description: no original description)


Gene families : OG_42_0000607 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000607_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Pseudotsuga release: PSME_00053796-RA
Cluster HCCA clusters: Cluster_171

Target Alias Description ECC score Gene Family Method Actions
MA_10430204g0020 No alias (at1g69550 : 133.0) disease resistance protein... 0.03 Orthogroups_2024-Update
MA_10436182g0010 No alias (at1g69550 : 237.0) disease resistance protein... 0.04 Orthogroups_2024-Update
MA_10437031g0020 No alias no hits & (original description: no original description) 0.05 Orthogroups_2024-Update
MA_116648g0020 No alias (at1g69550 : 168.0) disease resistance protein... 0.03 Orthogroups_2024-Update
MA_6125650g0010 No alias no hits & (original description: no original description) 0.03 Orthogroups_2024-Update
MA_6154g0010 No alias (at1g69550 : 104.0) disease resistance protein... 0.03 Orthogroups_2024-Update
PSME_00023884-RA No alias (at1g69550 : 150.0) disease resistance protein... 0.04 Orthogroups_2024-Update
PSME_00029256-RA No alias (at1g69550 : 97.4) disease resistance protein... 0.04 Orthogroups_2024-Update
PSME_00035582-RA No alias (at1g69550 : 189.0) disease resistance protein... 0.06 Orthogroups_2024-Update
PSME_00049255-RA No alias (at1g69550 : 229.0) disease resistance protein... 0.04 Orthogroups_2024-Update
PSME_00052965-RA No alias (at1g69550 : 271.0) disease resistance protein... 0.05 Orthogroups_2024-Update
PSME_00053001-RA No alias (at1g69550 : 147.0) disease resistance protein... 0.04 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0005216 ion channel activity IEP Predicted GO
MF GO:0005515 protein binding IEP Predicted GO
BP GO:0007275 multicellular organism development IEP Predicted GO
MF GO:0022838 substrate-specific channel activity IEP Predicted GO
BP GO:0032501 multicellular organismal process IEP Predicted GO
BP GO:0032502 developmental process IEP Predicted GO
MF GO:0043531 ADP binding IEP Predicted GO
BP GO:0048856 anatomical structure development IEP Predicted GO
MF GO:0071949 FAD binding IEP Predicted GO

No InterPro domains available for this sequence

No external refs found!