1. Home
  2. Species
  3. Pseudotsuga menziesii
  4. Sequence
  5. PSME_00054906-RA

PSME_00054906-RA


Description : no hits & (original description: no original description)


Gene families : OG_42_0000720 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000720_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Pseudotsuga release: PSME_00054906-RA
Cluster HCCA clusters: Cluster_12

Target Alias Description ECC score Gene Family Method Actions
PSME_00002198-RA No alias no hits & (original description: no original description) 0.04 Orthogroups_2024-Update
PSME_00011599-RA No alias no hits & (original description: no original description) 0.05 Orthogroups_2024-Update
PSME_00012653-RA No alias no hits & (original description: no original description) 0.04 Orthogroups_2024-Update
PSME_00014616-RA No alias no hits & (original description: no original description) 0.04 Orthogroups_2024-Update
PSME_00014714-RA No alias no hits & (original description: no original description) 0.05 Orthogroups_2024-Update
PSME_00024573-RA No alias no hits & (original description: no original description) 0.01 Orthogroups_2024-Update
PSME_00036141-RA No alias no hits & (original description: no original description) 0.04 Orthogroups_2024-Update
PSME_00037762-RA No alias no hits & (original description: no original description) 0.01 Orthogroups_2024-Update
PSME_00045234-RA No alias no hits & (original description: no original description) 0.04 Orthogroups_2024-Update
PSME_00053383-RA No alias no hits & (original description: no original description) 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
BP GO:0000723 telomere maintenance IEP Predicted GO
MF GO:0003678 DNA helicase activity IEP Predicted GO
MF GO:0004664 prephenate dehydratase activity IEP Predicted GO
BP GO:0006558 L-phenylalanine metabolic process IEP Predicted GO
BP GO:0009094 L-phenylalanine biosynthetic process IEP Predicted GO
BP GO:0009095 aromatic amino acid family biosynthetic process, prephenate pathway IEP Predicted GO
MF GO:0015238 drug transmembrane transporter activity IEP Predicted GO
MF GO:0030976 thiamine pyrophosphate binding IEP Predicted GO
BP GO:0032200 telomere organization IEP Predicted GO
MF GO:0033926 glycopeptide alpha-N-acetylgalactosaminidase activity IEP Predicted GO
BP GO:0060249 anatomical structure homeostasis IEP Predicted GO
MF GO:0140103 catalytic activity, acting on a glycoprotein IEP Predicted GO
MF GO:1901681 sulfur compound binding IEP Predicted GO
BP GO:1902221 erythrose 4-phosphate/phosphoenolpyruvate family amino acid metabolic process IEP Predicted GO
BP GO:1902223 erythrose 4-phosphate/phosphoenolpyruvate family amino acid biosynthetic process IEP Predicted GO
InterPro domains Description Start Stop
IPR026960 RVT-Znf 213 295
No external refs found!