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  5. PSME_00055013-RA

PSME_00055013-RA


Description : (at1g69550 : 137.0) disease resistance protein (TIR-NBS-LRR class); FUNCTIONS IN: transmembrane receptor activity, nucleoside-triphosphatase activity, nucleotide binding, ATP binding; INVOLVED IN: signal transduction, defense response, apoptosis, innate immune response; LOCATED IN: intrinsic to membrane, endomembrane system; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: ATPase, AAA+ type, core (InterPro:IPR003593), NB-ARC (InterPro:IPR002182), Leucine-rich repeat (InterPro:IPR001611), Disease resistance protein (InterPro:IPR000767), Toll-Interleukin receptor (InterPro:IPR000157); BEST Arabidopsis thaliana protein match is: Disease resistance protein (TIR-NBS-LRR class) (TAIR:AT5G11250.1); Has 8455 Blast hits to 8197 proteins in 261 species: Archae - 0; Bacteria - 113; Metazoa - 3; Fungi - 4; Plants - 8303; Viruses - 0; Other Eukaryotes - 32 (source: NCBI BLink). & (reliability: 274.0) & (original description: no original description)


Gene families : OG_42_0000607 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000607_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Pseudotsuga release: PSME_00055013-RA
Cluster HCCA clusters: Cluster_171

Target Alias Description ECC score Gene Family Method Actions
MA_10433431g0020 No alias (at1g69550 : 123.0) disease resistance protein... 0.04 Orthogroups_2024-Update
MA_10437031g0020 No alias no hits & (original description: no original description) 0.04 Orthogroups_2024-Update
MA_9403319g0010 No alias no hits & (original description: no original description) 0.03 Orthogroups_2024-Update
PSME_00012314-RA No alias (at1g69550 : 176.0) disease resistance protein... 0.07 Orthogroups_2024-Update
PSME_00013193-RA No alias (at1g69550 : 211.0) disease resistance protein... 0.04 Orthogroups_2024-Update
PSME_00014666-RA No alias (at1g69550 : 257.0) disease resistance protein... 0.04 Orthogroups_2024-Update
PSME_00016259-RA No alias (at1g69550 : 370.0) disease resistance protein... 0.05 Orthogroups_2024-Update
PSME_00016728-RA No alias (at1g69550 : 234.0) disease resistance protein... 0.03 Orthogroups_2024-Update
PSME_00017633-RA No alias (at1g69550 : 176.0) disease resistance protein... 0.03 Orthogroups_2024-Update
PSME_00022892-RA No alias (at1g69550 : 93.6) disease resistance protein... 0.04 Orthogroups_2024-Update
PSME_00023884-RA No alias (at1g69550 : 150.0) disease resistance protein... 0.05 Orthogroups_2024-Update
PSME_00025149-RA No alias (at1g69550 : 231.0) disease resistance protein... 0.05 Orthogroups_2024-Update
PSME_00029570-RA No alias (at1g69550 : 193.0) disease resistance protein... 0.04 Orthogroups_2024-Update
PSME_00034830-RA No alias (at1g69550 : 123.0) disease resistance protein... 0.04 Orthogroups_2024-Update
PSME_00035584-RA No alias (at1g69550 : 191.0) disease resistance protein... 0.03 Orthogroups_2024-Update
PSME_00038789-RA No alias (at1g69550 : 138.0) disease resistance protein... 0.04 Orthogroups_2024-Update
PSME_00049255-RA No alias (at1g69550 : 229.0) disease resistance protein... 0.04 Orthogroups_2024-Update
PSME_00052649-RA No alias (at1g69550 : 417.0) disease resistance protein... 0.04 Orthogroups_2024-Update
PSME_00052965-RA No alias (at1g69550 : 271.0) disease resistance protein... 0.04 Orthogroups_2024-Update
PSME_00054818-RA No alias (at1g69550 : 181.0) disease resistance protein... 0.04 Orthogroups_2024-Update
PSME_00055175-RA No alias (at1g69550 : 120.0) disease resistance protein... 0.04 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA InterProScan predictions
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Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEP Predicted GO
MF GO:0004180 carboxypeptidase activity IEP Predicted GO
MF GO:0004185 serine-type carboxypeptidase activity IEP Predicted GO
MF GO:0004672 protein kinase activity IEP Predicted GO
BP GO:0006464 cellular protein modification process IEP Predicted GO
BP GO:0006468 protein phosphorylation IEP Predicted GO
BP GO:0006793 phosphorus metabolic process IEP Predicted GO
BP GO:0006796 phosphate-containing compound metabolic process IEP Predicted GO
BP GO:0006807 nitrogen compound metabolic process IEP Predicted GO
BP GO:0007275 multicellular organism development IEP Predicted GO
BP GO:0008064 regulation of actin polymerization or depolymerization IEP Predicted GO
MF GO:0008238 exopeptidase activity IEP Predicted GO
CC GO:0008290 F-actin capping protein complex IEP Predicted GO
BP GO:0010639 negative regulation of organelle organization IEP Predicted GO
MF GO:0016301 kinase activity IEP Predicted GO
BP GO:0016310 phosphorylation IEP Predicted GO
MF GO:0016740 transferase activity IEP Predicted GO
MF GO:0016772 transferase activity, transferring phosphorus-containing groups IEP Predicted GO
MF GO:0016773 phosphotransferase activity, alcohol group as acceptor IEP Predicted GO
MF GO:0016840 carbon-nitrogen lyase activity IEP Predicted GO
MF GO:0016843 amine-lyase activity IEP Predicted GO
MF GO:0016844 strictosidine synthase activity IEP Predicted GO
MF GO:0017076 purine nucleotide binding IEP Predicted GO
BP GO:0019538 protein metabolic process IEP Predicted GO
CC GO:0030684 preribosome IEP Predicted GO
BP GO:0030832 regulation of actin filament length IEP Predicted GO
BP GO:0030833 regulation of actin filament polymerization IEP Predicted GO
BP GO:0030834 regulation of actin filament depolymerization IEP Predicted GO
BP GO:0030835 negative regulation of actin filament depolymerization IEP Predicted GO
BP GO:0030837 negative regulation of actin filament polymerization IEP Predicted GO
BP GO:0031333 negative regulation of protein complex assembly IEP Predicted GO
CC GO:0032040 small-subunit processome IEP Predicted GO
BP GO:0032271 regulation of protein polymerization IEP Predicted GO
BP GO:0032272 negative regulation of protein polymerization IEP Predicted GO
BP GO:0032501 multicellular organismal process IEP Predicted GO
BP GO:0032502 developmental process IEP Predicted GO
BP GO:0032535 regulation of cellular component size IEP Predicted GO
MF GO:0032553 ribonucleotide binding IEP Predicted GO
MF GO:0032555 purine ribonucleotide binding IEP Predicted GO
BP GO:0032956 regulation of actin cytoskeleton organization IEP Predicted GO
BP GO:0032970 regulation of actin filament-based process IEP Predicted GO
BP GO:0033043 regulation of organelle organization IEP Predicted GO
MF GO:0036094 small molecule binding IEP Predicted GO
BP GO:0036211 protein modification process IEP Predicted GO
MF GO:0043168 anion binding IEP Predicted GO
BP GO:0043170 macromolecule metabolic process IEP Predicted GO
BP GO:0043242 negative regulation of protein complex disassembly IEP Predicted GO
BP GO:0043244 regulation of protein complex disassembly IEP Predicted GO
BP GO:0043254 regulation of protein complex assembly IEP Predicted GO
BP GO:0043412 macromolecule modification IEP Predicted GO
BP GO:0044087 regulation of cellular component biogenesis IEP Predicted GO
BP GO:0044238 primary metabolic process IEP Predicted GO
BP GO:0044260 cellular macromolecule metabolic process IEP Predicted GO
BP GO:0044267 cellular protein metabolic process IEP Predicted GO
BP GO:0048856 anatomical structure development IEP Predicted GO
BP GO:0051016 barbed-end actin filament capping IEP Predicted GO
BP GO:0051128 regulation of cellular component organization IEP Predicted GO
BP GO:0051129 negative regulation of cellular component organization IEP Predicted GO
BP GO:0051493 regulation of cytoskeleton organization IEP Predicted GO
BP GO:0051494 negative regulation of cytoskeleton organization IEP Predicted GO
BP GO:0051693 actin filament capping IEP Predicted GO
MF GO:0070008 serine-type exopeptidase activity IEP Predicted GO
BP GO:0090066 regulation of anatomical structure size IEP Predicted GO
MF GO:0097367 carbohydrate derivative binding IEP Predicted GO
BP GO:0110053 regulation of actin filament organization IEP Predicted GO
MF GO:0140096 catalytic activity, acting on a protein IEP Predicted GO
MF GO:1901265 nucleoside phosphate binding IEP Predicted GO
BP GO:1901564 organonitrogen compound metabolic process IEP Predicted GO
BP GO:1901879 regulation of protein depolymerization IEP Predicted GO
BP GO:1901880 negative regulation of protein depolymerization IEP Predicted GO
BP GO:1902903 regulation of supramolecular fiber organization IEP Predicted GO
BP GO:1902904 negative regulation of supramolecular fiber organization IEP Predicted GO
InterPro domains Description Start Stop
IPR001611 Leu-rich_rpt 82 140
No external refs found!