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  5. PSME_00055069-RA

PSME_00055069-RA


Description : (at4g33720 : 135.0) CAP (Cysteine-rich secretory proteins, Antigen 5, and Pathogenesis-related 1 protein) superfamily protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system, extracellular region; EXPRESSED IN: root; CONTAINS InterPro DOMAIN/s: Allergen V5/Tpx-1 related, conserved site (InterPro:IPR018244), Allergen V5/Tpx-1 related (InterPro:IPR001283), Ves allergen (InterPro:IPR002413), SCP-like extracellular (InterPro:IPR014044); BEST Arabidopsis thaliana protein match is: basic pathogenesis-related protein 1 (TAIR:AT2G14580.1); Has 3131 Blast hits to 3024 proteins in 381 species: Archae - 0; Bacteria - 70; Metazoa - 1690; Fungi - 339; Plants - 919; Viruses - 0; Other Eukaryotes - 113 (source: NCBI BLink). & (p11670|prb1_tobac : 130.0) Basic form of pathogenesis-related protein 1 precursor (PRP 1) - Nicotiana tabacum (Common tobacco) & (reliability: 270.0) & (original description: no original description)


Gene families : OG_42_0000094 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000094_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Pseudotsuga release: PSME_00055069-RA
Cluster HCCA clusters: Cluster_40

Target Alias Description ECC score Gene Family Method Actions
A4A49_13127 No alias pathogenesis-related protein 1a 0.05 Orthogroups_2024-Update
A4A49_20434 No alias pathogenesis-related protein 1b 0.04 Orthogroups_2024-Update
A4A49_29708 No alias pathogenesis-related protein pr-1 0.02 Orthogroups_2024-Update
A4A49_38413 No alias pathogenesis-related leaf protein 4 0.02 Orthogroups_2024-Update
A4A49_42493 No alias basic form of pathogenesis-related protein 1 0.03 Orthogroups_2024-Update
At2g14610 No alias Pathogenesis-related protein 1... 0.02 Orthogroups_2024-Update
At4g31470 No alias CAP (Cysteine-rich secretory proteins, Antigen 5, and... 0.02 Orthogroups_2024-Update
Bradi1g57580 No alias CAP (Cysteine-rich secretory proteins, Antigen 5, and... 0.03 Orthogroups_2024-Update
Bradi1g57590 No alias CAP (Cysteine-rich secretory proteins, Antigen 5, and... 0.08 Orthogroups_2024-Update
Brara.C01183.1 No alias CAPE precursor polypeptide 0.02 Orthogroups_2024-Update
Glyma.01G180366 No alias CAP (Cysteine-rich secretory proteins, Antigen 5, and... 0.03 Orthogroups_2024-Update
Glyma.13G251700 No alias CAP (Cysteine-rich secretory proteins, Antigen 5, and... 0.03 Orthogroups_2024-Update
Glyma.13G252300 No alias CAP (Cysteine-rich secretory proteins, Antigen 5, and... 0.03 Orthogroups_2024-Update
HORVU5Hr1G055950.2 No alias CAPE precursor polypeptide 0.05 Orthogroups_2024-Update
HORVU7Hr1G033530.1 No alias CAPE precursor polypeptide 0.05 Orthogroups_2024-Update
LOC_Os02g27300 No alias SCP-like extracellular protein, expressed 0.02 Orthogroups_2024-Update
LOC_Os04g22220 No alias SCP-like extracellular protein, expressed 0.02 Orthogroups_2024-Update
LOC_Os07g03600 No alias SCP-like extracellular protein, expressed 0.02 Orthogroups_2024-Update
LOC_Os07g03710 No alias SCP-like extracellular protein, expressed 0.03 Orthogroups_2024-Update
MA_10428480g0010 No alias (p08299|pr1a_tobac : 196.0) Pathogenesis-related protein... 0.08 Orthogroups_2024-Update
MA_150049g0010 No alias (p11670|prb1_tobac : 185.0) Basic form of... 0.05 Orthogroups_2024-Update
MA_501572g0010 No alias (p08299|pr1a_tobac : 165.0) Pathogenesis-related protein... 0.09 Orthogroups_2024-Update
MA_598524g0010 No alias (at5g66590 : 96.3) CAP (Cysteine-rich secretory... 0.03 Orthogroups_2024-Update
Mp5g12510.1 No alias Pathogenesis-related protein 1C OS=Nicotiana tabacum... 0.02 Orthogroups_2024-Update
Mp5g16820.1 No alias Basic form of pathogenesis-related protein 1... 0.04 Orthogroups_2024-Update
Potri.001G288400 No alias pathogenesis-related gene 1 0.03 Orthogroups_2024-Update
Pp1s297_72V6 No alias pathogenesis-related maize seed protein 0.02 Orthogroups_2024-Update
Seita.1G344800.1 No alias CAPE precursor polypeptide 0.03 Orthogroups_2024-Update
Seita.2G103900.1 No alias CAPE precursor polypeptide 0.03 Orthogroups_2024-Update
Seita.5G175100.1 No alias CAPE precursor polypeptide 0.03 Orthogroups_2024-Update
Seita.9G290900.1 No alias CAPE precursor polypeptide 0.03 Orthogroups_2024-Update
Sobic.002G023300.1 No alias CAPE precursor polypeptide 0.05 Orthogroups_2024-Update
Sobic.010G020200.1 No alias CAPE precursor polypeptide 0.05 Orthogroups_2024-Update
Solyc01g106620 No alias Pathogenesis-related protein 1 (AHRD V3.3 *** E2GEV9_9ROSI) 0.03 Orthogroups_2024-Update
Solyc09g006010 No alias Pathogenesis-related protein 1 (AHRD V3.3 *** Q75QH2_CAPCH) 0.03 Orthogroups_2024-Update
Solyc09g007020 No alias pathogenesis-related protein 0.04 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0001871 pattern binding IEP Predicted GO
MF GO:0003824 catalytic activity IEP Predicted GO
MF GO:0004421 hydroxymethylglutaryl-CoA synthase activity IEP Predicted GO
MF GO:0004553 hydrolase activity, hydrolyzing O-glycosyl compounds IEP Predicted GO
MF GO:0004556 alpha-amylase activity IEP Predicted GO
MF GO:0004568 chitinase activity IEP Predicted GO
MF GO:0005509 calcium ion binding IEP Predicted GO
BP GO:0005975 carbohydrate metabolic process IEP Predicted GO
BP GO:0006022 aminoglycan metabolic process IEP Predicted GO
BP GO:0006026 aminoglycan catabolic process IEP Predicted GO
BP GO:0006030 chitin metabolic process IEP Predicted GO
BP GO:0006032 chitin catabolic process IEP Predicted GO
BP GO:0006040 amino sugar metabolic process IEP Predicted GO
BP GO:0006629 lipid metabolic process IEP Predicted GO
MF GO:0008061 chitin binding IEP Predicted GO
BP GO:0008150 biological_process IEP Predicted GO
BP GO:0008152 metabolic process IEP Predicted GO
BP GO:0009056 catabolic process IEP Predicted GO
BP GO:0009057 macromolecule catabolic process IEP Predicted GO
MF GO:0016160 amylase activity IEP Predicted GO
MF GO:0016787 hydrolase activity IEP Predicted GO
MF GO:0016798 hydrolase activity, acting on glycosyl bonds IEP Predicted GO
BP GO:0016998 cell wall macromolecule catabolic process IEP Predicted GO
BP GO:0017144 drug metabolic process IEP Predicted GO
MF GO:0030247 polysaccharide binding IEP Predicted GO
BP GO:0042737 drug catabolic process IEP Predicted GO
BP GO:0043170 macromolecule metabolic process IEP Predicted GO
BP GO:0044036 cell wall macromolecule metabolic process IEP Predicted GO
BP GO:0044237 cellular metabolic process IEP Predicted GO
BP GO:0044238 primary metabolic process IEP Predicted GO
BP GO:0044248 cellular catabolic process IEP Predicted GO
BP GO:0044260 cellular macromolecule metabolic process IEP Predicted GO
BP GO:0046348 amino sugar catabolic process IEP Predicted GO
MF GO:0046912 transferase activity, transferring acyl groups, acyl groups converted into alkyl on transfer IEP Predicted GO
BP GO:0071704 organic substance metabolic process IEP Predicted GO
BP GO:1901071 glucosamine-containing compound metabolic process IEP Predicted GO
BP GO:1901072 glucosamine-containing compound catabolic process IEP Predicted GO
BP GO:1901135 carbohydrate derivative metabolic process IEP Predicted GO
BP GO:1901136 carbohydrate derivative catabolic process IEP Predicted GO
BP GO:1901564 organonitrogen compound metabolic process IEP Predicted GO
BP GO:1901565 organonitrogen compound catabolic process IEP Predicted GO
BP GO:1901575 organic substance catabolic process IEP Predicted GO
InterPro domains Description Start Stop
IPR014044 CAP_domain 37 68
IPR014044 CAP_domain 80 114
No external refs found!