1. Home
  2. Species
  3. Pseudotsuga menziesii
  4. Sequence
  5. PSME_00055271-RA

PSME_00055271-RA


Description : (at4g13000 : 269.0) AGC (cAMP-dependent, cGMP-dependent and protein kinase C) kinase family protein; FUNCTIONS IN: kinase activity; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: cellular_component unknown; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 10 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, catalytic domain (InterPro:IPR000719), Serine/threonine-protein kinase domain (InterPro:IPR002290), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), AGC-kinase, C-terminal (InterPro:IPR000961), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: AGC (cAMP-dependent, cGMP-dependent and protein kinase C) kinase family protein (TAIR:AT3G25250.1); Has 90354 Blast hits to 89318 proteins in 3214 species: Archae - 80; Bacteria - 12840; Metazoa - 34852; Fungi - 11582; Plants - 13206; Viruses - 261; Other Eukaryotes - 17533 (source: NCBI BLink). & (p47997|g11a_orysa : 252.0) Protein kinase G11A (EC 2.7.11.1) - Oryza sativa (Rice) & (reliability: 498.0) & (original description: no original description)


Gene families : OG_42_0000089 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000089_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Pseudotsuga release: PSME_00055271-RA
Cluster HCCA clusters: Cluster_40

Target Alias Description ECC score Gene Family Method Actions
A4A49_04082 No alias serinethreonine-protein kinase d6pkl2 0.04 Orthogroups_2024-Update
At5g55910 No alias Serine/threonine-protein kinase D6PK... 0.03 Orthogroups_2024-Update
Brara.D01015.1 No alias AGC-VIII protein kinase & EC_2.7 transferase... 0.03 Orthogroups_2024-Update
GRMZM2G300771 No alias AGC (cAMP-dependent, cGMP-dependent and protein kinase... 0.04 Orthogroups_2024-Update
Glyma.08G345500 No alias AGC (cAMP-dependent, cGMP-dependent and protein kinase... 0.03 Orthogroups_2024-Update
Glyma.15G252700 No alias WAG 1 0.02 Orthogroups_2024-Update
HORVU7Hr1G043790.5 No alias AGC-VIII protein kinase & EC_2.7 transferase... 0.02 Orthogroups_2024-Update
LOC_Os04g33500 No alias protein kinase, putative, expressed 0.03 Orthogroups_2024-Update
LOC_Os08g38320 No alias AGC_PVPK_like_kin82y.14 - ACG kinases include homologs... 0.02 Orthogroups_2024-Update
MA_5664g0010 No alias (at3g20830 : 273.0) AGC (cAMP-dependent, cGMP-dependent... 0.02 Orthogroups_2024-Update
MA_932195g0010 No alias (at1g79250 : 83.2) AGC kinase 1.7 (AGC1.7); CONTAINS... 0.03 Orthogroups_2024-Update
PSME_00021659-RA No alias (at3g25250 : 296.0) Arabidopsis protein kinase; AGC2-1;... 0.04 Orthogroups_2024-Update
PSME_00034467-RA No alias (at3g20830 : 296.0) AGC (cAMP-dependent, cGMP-dependent... 0.03 Orthogroups_2024-Update
PSME_00049608-RA No alias (at4g26610 : 409.0) D6 protein kinase like 1 (D6PKL1);... 0.03 Orthogroups_2024-Update
PSME_00052423-RA No alias (at3g45780 : 217.0) Blue-light photoreceptor. Contains a... 0.09 Orthogroups_2024-Update
PSME_00054560-RA No alias (at3g12690 : 239.0) Encodes a putative serine/threonine... 0.04 Orthogroups_2024-Update
PSME_00055180-RA No alias (at3g25250 : 207.0) Arabidopsis protein kinase; AGC2-1;... 0.05 Orthogroups_2024-Update
Potri.002G137700 No alias Protein kinase superfamily protein 0.03 Orthogroups_2024-Update
Potri.009G146500 No alias Protein kinase superfamily protein 0.02 Orthogroups_2024-Update
Sobic.007G212100.1 No alias AGC-VIII protein kinase & EC_2.7 transferase... 0.04 Orthogroups_2024-Update
Sobic.007G221600.1 No alias AGC-VIII protein kinase & EC_2.7 transferase... 0.03 Orthogroups_2024-Update
Sobic.009G087200.1 No alias EC_2.7 transferase transferring phosphorus-containing group 0.03 Orthogroups_2024-Update
Solyc02g093360 No alias Stpk1 protein kinase (AHRD V3.3 *** Q41493_SOLTU) 0.03 Orthogroups_2024-Update
Solyc10g083500 No alias Protein kinase family protein (AHRD V3.3 *-* Q9LZS4_ARATH) 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0004672 protein kinase activity IEA InterProScan predictions
MF GO:0005524 ATP binding IEA InterProScan predictions
BP GO:0006468 protein phosphorylation IEA InterProScan predictions
Toggle parental
Type GO Term Name Evidence Source
MF GO:0005506 iron ion binding IEP Predicted GO
BP GO:0009605 response to external stimulus IEP Predicted GO
BP GO:0009607 response to biotic stimulus IEP Predicted GO
BP GO:0009617 response to bacterium IEP Predicted GO
BP GO:0009620 response to fungus IEP Predicted GO
MF GO:0016491 oxidoreductase activity IEP Predicted GO
MF GO:0016705 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen IEP Predicted GO
MF GO:0016746 transferase activity, transferring acyl groups IEP Predicted GO
MF GO:0016747 transferase activity, transferring acyl groups other than amino-acyl groups IEP Predicted GO
MF GO:0020037 heme binding IEP Predicted GO
BP GO:0042742 defense response to bacterium IEP Predicted GO
MF GO:0043169 cation binding IEP Predicted GO
BP GO:0043207 response to external biotic stimulus IEP Predicted GO
MF GO:0046872 metal ion binding IEP Predicted GO
MF GO:0046906 tetrapyrrole binding IEP Predicted GO
BP GO:0050832 defense response to fungus IEP Predicted GO
BP GO:0051704 multi-organism process IEP Predicted GO
BP GO:0051707 response to other organism IEP Predicted GO
BP GO:0055114 oxidation-reduction process IEP Predicted GO
BP GO:0098542 defense response to other organism IEP Predicted GO
InterPro domains Description Start Stop
IPR000719 Prot_kinase_dom 30 184
IPR000719 Prot_kinase_dom 227 327
No external refs found!