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  5. PSME_00055463-RA

PSME_00055463-RA


Description : (at2g20780 : 528.0) Major facilitator superfamily protein; FUNCTIONS IN: carbohydrate transmembrane transporter activity, sugar:hydrogen symporter activity; INVOLVED IN: transport, transmembrane transport; LOCATED IN: integral to membrane, membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Sugar transporter, conserved site (InterPro:IPR005829), Major facilitator superfamily (InterPro:IPR020846), General substrate transporter (InterPro:IPR005828), Sugar/inositol transporter (InterPro:IPR003663), Major facilitator superfamily, general substrate transporter (InterPro:IPR016196); BEST Arabidopsis thaliana protein match is: polyol/monosaccharide transporter 5 (TAIR:AT3G18830.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (q41144|stc_ricco : 189.0) Sugar carrier protein C - Ricinus communis (Castor bean) & (reliability: 1056.0) & (original description: no original description)


Gene families : OG_42_0000406 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000406_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Pseudotsuga release: PSME_00055463-RA
Cluster HCCA clusters: Cluster_239

Target Alias Description ECC score Gene Family Method Actions
GRMZM2G039580 No alias polyol/monosaccharide transporter 5 0.02 Orthogroups_2024-Update
GRMZM2G064437 No alias polyol/monosaccharide transporter 5 0.03 Orthogroups_2024-Update
GRMZM2G302604 No alias polyol/monosaccharide transporter 5 0.02 Orthogroups_2024-Update
HORVU2Hr1G036570.2 No alias polyol/monosaccharide transporter *(PLT) 0.03 Orthogroups_2024-Update
HORVU4Hr1G071020.1 No alias polyol/monosaccharide transporter *(PLT) 0.02 Orthogroups_2024-Update
MA_10378718g0010 No alias no hits & (original description: no original description) 0.04 Orthogroups_2024-Update
MA_41476g0010 No alias (at2g20780 : 468.0) Major facilitator superfamily... 0.03 Orthogroups_2024-Update
PSME_00010841-RA No alias (at2g20780 : 525.0) Major facilitator superfamily... 0.03 Orthogroups_2024-Update
Sobic.001G469500.1 No alias polyol/monosaccharide transporter *(PLT) 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source
CC GO:0016021 integral component of membrane IEA InterProScan predictions
MF GO:0022857 transmembrane transporter activity IEA InterProScan predictions
BP GO:0055085 transmembrane transport IEA InterProScan predictions
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Type GO Term Name Evidence Source
MF GO:0004177 aminopeptidase activity IEP Predicted GO
MF GO:0004506 squalene monooxygenase activity IEP Predicted GO
MF GO:0004565 beta-galactosidase activity IEP Predicted GO
BP GO:0006778 porphyrin-containing compound metabolic process IEP Predicted GO
BP GO:0006779 porphyrin-containing compound biosynthetic process IEP Predicted GO
BP GO:0006783 heme biosynthetic process IEP Predicted GO
BP GO:0006784 heme a biosynthetic process IEP Predicted GO
CC GO:0009341 beta-galactosidase complex IEP Predicted GO
MF GO:0015925 galactosidase activity IEP Predicted GO
MF GO:0016301 kinase activity IEP Predicted GO
MF GO:0016307 phosphatidylinositol phosphate kinase activity IEP Predicted GO
MF GO:0016772 transferase activity, transferring phosphorus-containing groups IEP Predicted GO
MF GO:0016773 phosphotransferase activity, alcohol group as acceptor IEP Predicted GO
MF GO:0016866 intramolecular transferase activity IEP Predicted GO
MF GO:0016868 intramolecular transferase activity, phosphotransferases IEP Predicted GO
BP GO:0033013 tetrapyrrole metabolic process IEP Predicted GO
BP GO:0033014 tetrapyrrole biosynthetic process IEP Predicted GO
BP GO:0042168 heme metabolic process IEP Predicted GO
BP GO:0042440 pigment metabolic process IEP Predicted GO
MF GO:0043531 ADP binding IEP Predicted GO
BP GO:0046148 pigment biosynthetic process IEP Predicted GO
BP GO:0046160 heme a metabolic process IEP Predicted GO
InterPro domains Description Start Stop
IPR005828 MFS_sugar_transport-like 55 524
No external refs found!