1. Home
  2. Species
  3. Pseudotsuga menziesii
  4. Sequence
  5. PSME_00057031-RA

PSME_00057031-RA


Description : (at2g46800 : 229.0) Encodes a member of the zinc transporter (ZAT) and cation diffusion facilitator (CDF) families. It is expressed throughout the plant, especially in dividing, differentiating and expanding cells. The protein is localized to the vacuolar membrane. Mediates Zn ion homeostasis.; zinc transporter of Arabidopsis thaliana (ZAT); FUNCTIONS IN: zinc ion transmembrane transporter activity, inorganic anion transmembrane transporter activity, metal ion transmembrane transporter activity; INVOLVED IN: cellular zinc ion homeostasis, zinc ion transport, response to metal ion; LOCATED IN: vacuolar membrane, plasma membrane, vacuole; EXPRESSED IN: 27 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Cation efflux protein (InterPro:IPR002524); BEST Arabidopsis thaliana protein match is: metal tolerance protein A2 (TAIR:AT3G58810.1); Has 17747 Blast hits to 10591 proteins in 2218 species: Archae - 164; Bacteria - 10632; Metazoa - 2900; Fungi - 834; Plants - 528; Viruses - 26; Other Eukaryotes - 2663 (source: NCBI BLink). & (reliability: 458.0) & (original description: no original description)


Gene families : OG_42_0002169 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0002169_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Pseudotsuga release: PSME_00057031-RA
Cluster HCCA clusters: Cluster_244

Target Alias Description ECC score Gene Family Method Actions
Brara.C02342.1 No alias zinc cation transporter *(Zn-CDF) & zinc cation... 0.03 Orthogroups_2024-Update
Brara.D01763.1 No alias zinc cation transporter *(Zn-CDF) & zinc cation... 0.02 Orthogroups_2024-Update
Brara.E00246.1 No alias zinc cation transporter *(Zn-CDF) & zinc cation... 0.03 Orthogroups_2024-Update
Glyma.07G049200 No alias metal tolerance protein A2 0.03 Orthogroups_2024-Update
Mp6g12480.1 No alias zinc cation transporter (Zn-CDF) 0.03 Orthogroups_2024-Update
Potri.001G245800 No alias metal tolerance protein B1 0.03 Orthogroups_2024-Update
Pp1s102_71V6 No alias metal tolerance protein 0.04 Orthogroups_2024-Update

Type GO Term Name Evidence Source
BP GO:0006812 cation transport IEA InterProScan predictions
MF GO:0008324 cation transmembrane transporter activity IEA InterProScan predictions
CC GO:0016021 integral component of membrane IEA InterProScan predictions
BP GO:0055085 transmembrane transport IEA InterProScan predictions
Toggle parental
Type GO Term Name Evidence Source
MF GO:0004664 prephenate dehydratase activity IEP Predicted GO
BP GO:0006558 L-phenylalanine metabolic process IEP Predicted GO
BP GO:0009072 aromatic amino acid family metabolic process IEP Predicted GO
BP GO:0009073 aromatic amino acid family biosynthetic process IEP Predicted GO
BP GO:0009094 L-phenylalanine biosynthetic process IEP Predicted GO
BP GO:0009095 aromatic amino acid family biosynthetic process, prephenate pathway IEP Predicted GO
MF GO:0016836 hydro-lyase activity IEP Predicted GO
BP GO:1902221 erythrose 4-phosphate/phosphoenolpyruvate family amino acid metabolic process IEP Predicted GO
BP GO:1902223 erythrose 4-phosphate/phosphoenolpyruvate family amino acid biosynthetic process IEP Predicted GO
InterPro domains Description Start Stop
IPR002524 Cation_efflux 62 394
No external refs found!