Bradi1g04110

Description : cytokinin response factor 4

Gene families : OG_42_0000000 (Orthogroups_2024-Update) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Brachypodium release: Bradi1g04110
Cluster	HCCA clusters: Cluster_173

Target	Alias	Description	ECC score	Gene Family Method
A4A49_27754	No alias	ethylene-responsive transcription factor 1a	0.03	Orthogroups_2024-Update
At1g19210	No alias	Ethylene-responsive transcription factor ERF017...	0.03	Orthogroups_2024-Update
At3g25890	No alias	Ethylene-responsive transcription factor ERF119...	0.02	Orthogroups_2024-Update
At3g60490	No alias	Ethylene-responsive transcription factor ERF035...	0.03	Orthogroups_2024-Update
At4g36900	No alias	Ethylene-responsive transcription factor RAP2-10...	0.03	Orthogroups_2024-Update
At5g61590	No alias	Ethylene-responsive transcription factor ERF107...	0.03	Orthogroups_2024-Update
Brara.A03203.1	No alias	subgroup ERF-VII transcription factor & transcription...	0.02	Orthogroups_2024-Update
Brara.A03436.1	No alias	subgroup ERF-IV/DREB2 transcription factor	0.02	Orthogroups_2024-Update
Brara.B00526.1	No alias	subgroup ERF-VIII transcription factor	0.03	Orthogroups_2024-Update
Brara.B01950.1	No alias	transcription factor *(CRF) & subgroup ERF-VI...	0.03	Orthogroups_2024-Update
Brara.F03308.1	No alias	transcription factor *(CRF) & subgroup ERF-VI...	0.03	Orthogroups_2024-Update
Brara.I03383.1	No alias	subgroup ERF-II-DEAR transcription factor	0.02	Orthogroups_2024-Update
Glyma.02G179500	No alias	AINTEGUMENTA-like 7	0.02	Orthogroups_2024-Update
Glyma.11G035100	No alias	Integrase-type DNA-binding superfamily protein	0.04	Orthogroups_2024-Update
Glyma.12G117000	No alias	erf domain protein 9	0.02	Orthogroups_2024-Update
Glyma.14G205600	No alias	cytokinin response factor 4	0.03	Orthogroups_2024-Update
Glyma.17G210500	No alias	Integrase-type DNA-binding superfamily protein	0.03	Orthogroups_2024-Update
Glyma.19G164100	No alias	ethylene response factor 1	0.02	Orthogroups_2024-Update
HORVU6Hr1G060140.1	No alias	subgroup ERF-I transcription factor	0.03	Orthogroups_2024-Update
HORVU7Hr1G037180.1	No alias	subgroup ERF-I transcription factor	0.03	Orthogroups_2024-Update
LOC_Os04g34970	No alias	AP2 domain containing protein, expressed	0.03	Orthogroups_2024-Update
LOC_Os04g46220	No alias	ethylene-responsive transcription factor, putative, expressed	0.03	Orthogroups_2024-Update
LOC_Os05g41780	No alias	AP2 domain containing protein, expressed	0.02	Orthogroups_2024-Update
MA_121581g0010	No alias	(at1g22190 : 103.0) Integrase-type DNA-binding...	0.03	Orthogroups_2024-Update
MA_426919g0010	No alias	(at1g19210 : 109.0) encodes a member of the DREB...	0.02	Orthogroups_2024-Update
MA_65190g0010	No alias	(at5g19790 : 91.3) encodes a member of the ERF (ethylene...	0.03	Orthogroups_2024-Update
MA_891091g0010	No alias	(at4g17500 : 92.0) Encodes a member of the ERF (ethylene...	0.02	Orthogroups_2024-Update
Mp5g12480.1	No alias	Ethylene-responsive transcription factor ERF073...	0.02	Orthogroups_2024-Update
Potri.001G069300	No alias	Integrase-type DNA-binding superfamily protein	0.02	Orthogroups_2024-Update
Potri.013G158500	No alias	cytokinin response factor 4	0.03	Orthogroups_2024-Update
Potri.016G018600	No alias	Integrase-type DNA-binding superfamily protein	0.03	Orthogroups_2024-Update
Pp1s132_34V6	No alias	transcriptional factor	0.02	Orthogroups_2024-Update
Seita.2G156200.1	No alias	subgroup ERF-IX transcription factor	0.03	Orthogroups_2024-Update
Seita.2G215500.1	No alias	subgroup ERF-VII transcription factor & transcription...	0.03	Orthogroups_2024-Update
Seita.7G232100.1	No alias	subgroup ERF-VIII transcription factor	0.03	Orthogroups_2024-Update
Sobic.006G184700.1	No alias	subgroup ERF-III transcription factor	0.02	Orthogroups_2024-Update
Sobic.007G077100.1	No alias	Unknown function	0.02	Orthogroups_2024-Update
Solyc03g026280	No alias	CBF	0.03	Orthogroups_2024-Update
Solyc04g078640	No alias	Ethylene-responsive transcription factor (AHRD V3.3 -...	0.03	Orthogroups_2024-Update
Solyc08g078190	No alias	ethylene-responsive transcription factor	0.02	Orthogroups_2024-Update
Solyc11g042560	No alias	Ethylene-responsive transcription factor ERF021 family...	0.02	Orthogroups_2024-Update
Solyc12g009240	No alias	Ethylene-responsive transcription factor ERF017 (AHRD...	0.03	Orthogroups_2024-Update

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003700	DNA-binding transcription factor activity	IEA	InterProScan predictions
BP	GO:0006355	regulation of transcription, DNA-templated	IEA	InterProScan predictions
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009889	regulation of biosynthetic process	None	Extended
BP	GO:0010468	regulation of gene expression	None	Extended
BP	GO:0010556	regulation of macromolecule biosynthetic process	None	Extended
BP	GO:0019219	regulation of nucleobase-containing compound metabolic process	None	Extended
BP	GO:0019222	regulation of metabolic process	None	Extended
BP	GO:0031323	regulation of cellular metabolic process	None	Extended
BP	GO:0031326	regulation of cellular biosynthetic process	None	Extended
BP	GO:0050789	regulation of biological process	None	Extended
BP	GO:0050794	regulation of cellular process	None	Extended
BP	GO:0051171	regulation of nitrogen compound metabolic process	None	Extended
BP	GO:0051252	regulation of RNA metabolic process	None	Extended
BP	GO:0060255	regulation of macromolecule metabolic process	None	Extended
BP	GO:0065007	biological regulation	None	Extended
BP	GO:0080090	regulation of primary metabolic process	None	Extended
MF	GO:0140110	transcription regulator activity	None	Extended
BP	GO:1903506	regulation of nucleic acid-templated transcription	None	Extended
BP	GO:2000112	regulation of cellular macromolecule biosynthetic process	None	Extended
BP	GO:2001141	regulation of RNA biosynthetic process	None	Extended

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Type	GO Term	Name	Evidence	Source
MF	GO:0000062	fatty-acyl-CoA binding	IEP	Predicted GO
CC	GO:0005739	mitochondrion	IEP	Predicted GO
CC	GO:0005743	mitochondrial inner membrane	IEP	Predicted GO
CC	GO:0005779	integral component of peroxisomal membrane	IEP	Predicted GO
BP	GO:0008535	respiratory chain complex IV assembly	IEP	Predicted GO
BP	GO:0016559	peroxisome fission	IEP	Predicted GO
BP	GO:0017004	cytochrome complex assembly	IEP	Predicted GO
CC	GO:0019866	organelle inner membrane	IEP	Predicted GO
BP	GO:0022900	electron transport chain	IEP	Predicted GO
CC	GO:0031090	organelle membrane	IEP	Predicted GO
CC	GO:0031231	intrinsic component of peroxisomal membrane	IEP	Predicted GO
CC	GO:0031300	intrinsic component of organelle membrane	IEP	Predicted GO
CC	GO:0031301	integral component of organelle membrane	IEP	Predicted GO
CC	GO:0031966	mitochondrial membrane	IEP	Predicted GO
BP	GO:0033108	mitochondrial respiratory chain complex assembly	IEP	Predicted GO
MF	GO:0033218	amide binding	IEP	Predicted GO
BP	GO:0033617	mitochondrial respiratory chain complex IV assembly	IEP	Predicted GO
CC	GO:0044438	microbody part	IEP	Predicted GO
CC	GO:0044439	peroxisomal part	IEP	Predicted GO
BP	GO:0048285	organelle fission	IEP	Predicted GO
CC	GO:0070469	respiratory chain	IEP	Predicted GO
MF	GO:1901567	fatty acid derivative binding	IEP	Predicted GO
MF	GO:1901681	sulfur compound binding	IEP	Predicted GO

InterPro domains	Description	Start	Stop
IPR001471	AP2/ERF_dom	90	138

External Links

No external refs found!

Bradi1g04110

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation