Bradi1g04180

Description : RING/U-box superfamily protein

Gene families : OG_42_0003270 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0003270_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Brachypodium release: Bradi1g04180
Cluster	HCCA clusters: Cluster_42

Target	Alias	Description	ECC score	Gene Family Method
At1g55530	No alias	At1g55530/T5A14_7 [Source:UniProtKB/TrEMBL;Acc:Q9ZVU8]	0.03	Orthogroups_2024-Update
Brara.A01627.1	No alias	RING-H2-class BTL-subclass E3 ubiquitin ligase	0.03	Orthogroups_2024-Update
Brara.C01255.1	No alias	RING-H2-class BTL-subclass E3 ubiquitin ligase	0.03	Orthogroups_2024-Update

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003824	catalytic activity	None	Extended
MF	GO:0004842	ubiquitin-protein transferase activity	None	Extended
MF	GO:0016740	transferase activity	None	Extended
MF	GO:0019787	ubiquitin-like protein transferase activity	None	Extended
MF	GO:0061630	ubiquitin protein ligase activity	IEA	InterProScan predictions
MF	GO:0061659	ubiquitin-like protein ligase activity	None	Extended
MF	GO:0140096	catalytic activity, acting on a protein	None	Extended

Type	GO Term	Name	Evidence	Source
MF	GO:0003993	acid phosphatase activity	IEP	Predicted GO
BP	GO:0009892	negative regulation of metabolic process	IEP	Predicted GO
BP	GO:0010605	negative regulation of macromolecule metabolic process	IEP	Predicted GO
BP	GO:0010629	negative regulation of gene expression	IEP	Predicted GO
BP	GO:0016458	gene silencing	IEP	Predicted GO
BP	GO:0031047	gene silencing by RNA	IEP	Predicted GO

InterPro domains	Description	Start	Stop
IPR039525	RNF126-like_zinc-ribbon	8	38
IPR001841	Znf_RING	284	325

External Links

No external refs found!