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Description : chlorophyll A/B binding protein 1
Gene families : OG_42_0000070 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000070_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | Brachypodium release: Bradi1g12130 | |
| Cluster | HCCA clusters: Cluster_39 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| A4A49_03871 | No alias | chlorophyll a-b binding protein 36, chloroplastic | 0.03 | Orthogroups_2024-Update | |
| Brara.D02090.1 | No alias | component *(LHCb1/2/3) of LHC-II complex | 0.03 | Orthogroups_2024-Update | |
| Brara.E00980.1 | No alias | Unknown function | 0.03 | Orthogroups_2024-Update | |
| Brara.E00981.1 | No alias | component *(LHCb1/2/3) of LHC-II complex | 0.04 | Orthogroups_2024-Update | |
| Cre06.g278213 | No alias | light-harvesting chlorophyll-protein complex I subunit A4 | 0.02 | Orthogroups_2024-Update | |
| Cre10.g425900 | No alias | light-harvesting chlorophyll-protein complex I subunit A4 | 0.02 | Orthogroups_2024-Update | |
| Glyma.08G082900 | No alias | chlorophyll A/B binding protein 1 | 0.02 | Orthogroups_2024-Update | |
| HORVU1Hr1G078380.1 | No alias | component *(LHCb1/2/3) of LHC-II complex | 0.05 | Orthogroups_2024-Update | |
| HORVU1Hr1G088870.2 | No alias | component *(LHCb1/2/3) of LHC-II complex | 0.02 | Orthogroups_2024-Update | |
| HORVU1Hr1G088900.2 | No alias | component *(LHCb1/2/3) of LHC-II complex | 0.04 | Orthogroups_2024-Update | |
| HORVU1Hr1G088920.3 | No alias | component *(LHCb1/2/3) of LHC-II complex | 0.04 | Orthogroups_2024-Update | |
| HORVU1Hr1G089180.1 | No alias | component *(LHCb1/2/3) of LHC-II complex | 0.06 | Orthogroups_2024-Update | |
| HORVU2Hr1G040780.4 | No alias | component *(LHCb1/2/3) of LHC-II complex | 0.03 | Orthogroups_2024-Update | |
| HORVU5Hr1G066280.1 | No alias | component *(LHCa4) of LHC-I complex | 0.03 | Orthogroups_2024-Update | |
| HORVU5Hr1G087250.1 | No alias | component *(LHCb1/2/3) of LHC-II complex | 0.03 | Orthogroups_2024-Update | |
| HORVU5Hr1G109250.1 | No alias | component *(LHCb1/2/3) of LHC-II complex | 0.05 | Orthogroups_2024-Update | |
| HORVU5Hr1G109260.1 | No alias | component *(LHCb1/2/3) of LHC-II complex | 0.03 | Orthogroups_2024-Update | |
| HORVU5Hr1G109360.1 | No alias | component *(LHCb1/2/3) of LHC-II complex | 0.05 | Orthogroups_2024-Update | |
| HORVU5Hr1G124160.1 | No alias | component *(LHCb1/2/3) of LHC-II complex | 0.03 | Orthogroups_2024-Update | |
| HORVU6Hr1G016850.1 | No alias | component *(LHCb1/2/3) of LHC-II complex | 0.04 | Orthogroups_2024-Update | |
| HORVU6Hr1G016880.1 | No alias | component *(LHCb1/2/3) of LHC-II complex | 0.04 | Orthogroups_2024-Update | |
| HORVU6Hr1G016890.6 | No alias | component *(LHCb1/2/3) of LHC-II complex | 0.04 | Orthogroups_2024-Update | |
| HORVU6Hr1G016940.1 | No alias | component *(LHCb1/2/3) of LHC-II complex | 0.04 | Orthogroups_2024-Update | |
| HORVU6Hr1G091660.1 | No alias | component *(LHCb1/2/3) of LHC-II complex | 0.05 | Orthogroups_2024-Update | |
| HORVU7Hr1G040370.1 | No alias | component *(LHCb1/2/3) of LHC-II complex | 0.05 | Orthogroups_2024-Update | |
| HORVU7Hr1G040380.5 | No alias | component *(LHCb1/2/3) of LHC-II complex | 0.03 | Orthogroups_2024-Update | |
| Kfl00009_0500 | kfl00009_0500_v1.... | (p13869|cb12_pethy : 139.0) Chlorophyll a-b binding... | 0.03 | Orthogroups_2024-Update | |
| Kfl00009_0510 | kfl00009_0510_v1.1 | (at3g54890 : 130.0) Encodes a component of the light... | 0.02 | Orthogroups_2024-Update | |
| Kfl00517_0030 | kfl00517_0030_v1.... | (at3g54890 : 129.0) Encodes a component of the light... | 0.02 | Orthogroups_2024-Update | |
| Kfl00517_0040 | kfl00517_0040_v1.1 | (at3g54890 : 116.0) Encodes a component of the light... | 0.02 | Orthogroups_2024-Update | |
| LOC_Os02g52650 | No alias | chlorophyll A-B binding protein, putative, expressed | 0.04 | Orthogroups_2024-Update | |
| PSME_00045363-RA | No alias | (at3g54890 : 352.0) Encodes a component of the light... | 0.02 | Orthogroups_2024-Update | |
| PSME_00054494-RA | No alias | (p10049|cb21_pinth : 389.0) Chlorophyll a-b binding... | 0.04 | Orthogroups_2024-Update | |
| Seita.8G080900.1 | No alias | component *(LHCb5) of LHC-II complex | 0.03 | Orthogroups_2024-Update | |
| Sobic.001G177000.1 | No alias | component *(LHCb1/2/3) of LHC-II complex | 0.03 | Orthogroups_2024-Update | |
| Sobic.002G352100.1 | No alias | component *(LHCa2) of LHC-I complex | 0.04 | Orthogroups_2024-Update | |
| Sobic.004G056900.1 | No alias | component *(LHCa1) of LHC-I complex | 0.03 | Orthogroups_2024-Update | |
| Sobic.005G087000.1 | No alias | component *(LHCb5) of LHC-II complex | 0.03 | Orthogroups_2024-Update | |
| Solyc03g005760 | No alias | chlorophyll a/b-binding protein | 0.03 | Orthogroups_2024-Update | |
| Solyc12g009200 | No alias | Chlorophyll a-b binding protein, chloroplastic (AHRD... | 0.03 | Orthogroups_2024-Update | |
| Sopen03g001770 | No alias | Chlorophyll A-B binding protein | 0.03 | Orthogroups_2024-Update | |
| Sopen03g001810 | No alias | Chlorophyll A-B binding protein | 0.03 | Orthogroups_2024-Update | |
| Sopen12g004150 | No alias | Chlorophyll A-B binding protein | 0.03 | Orthogroups_2024-Update |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0003700 | DNA-binding transcription factor activity | IEP | Predicted GO |
| MF | GO:0003872 | 6-phosphofructokinase activity | IEP | Predicted GO |
| MF | GO:0003896 | DNA primase activity | IEP | Predicted GO |
| MF | GO:0004860 | protein kinase inhibitor activity | IEP | Predicted GO |
| MF | GO:0004861 | cyclin-dependent protein serine/threonine kinase inhibitor activity | IEP | Predicted GO |
| BP | GO:0005984 | disaccharide metabolic process | IEP | Predicted GO |
| BP | GO:0005991 | trehalose metabolic process | IEP | Predicted GO |
| BP | GO:0005992 | trehalose biosynthetic process | IEP | Predicted GO |
| BP | GO:0006090 | pyruvate metabolic process | IEP | Predicted GO |
| BP | GO:0006096 | glycolytic process | IEP | Predicted GO |
| BP | GO:0006165 | nucleoside diphosphate phosphorylation | IEP | Predicted GO |
| BP | GO:0006269 | DNA replication, synthesis of RNA primer | IEP | Predicted GO |
| BP | GO:0006725 | cellular aromatic compound metabolic process | IEP | Predicted GO |
| BP | GO:0006757 | ATP generation from ADP | IEP | Predicted GO |
| BP | GO:0007050 | cell cycle arrest | IEP | Predicted GO |
| MF | GO:0008168 | methyltransferase activity | IEP | Predicted GO |
| MF | GO:0008443 | phosphofructokinase activity | IEP | Predicted GO |
| MF | GO:0008883 | glutamyl-tRNA reductase activity | IEP | Predicted GO |
| BP | GO:0009058 | biosynthetic process | IEP | Predicted GO |
| BP | GO:0009132 | nucleoside diphosphate metabolic process | IEP | Predicted GO |
| BP | GO:0009135 | purine nucleoside diphosphate metabolic process | IEP | Predicted GO |
| BP | GO:0009166 | nucleotide catabolic process | IEP | Predicted GO |
| BP | GO:0009179 | purine ribonucleoside diphosphate metabolic process | IEP | Predicted GO |
| BP | GO:0009185 | ribonucleoside diphosphate metabolic process | IEP | Predicted GO |
| BP | GO:0009312 | oligosaccharide biosynthetic process | IEP | Predicted GO |
| MF | GO:0016538 | cyclin-dependent protein serine/threonine kinase regulator activity | IEP | Predicted GO |
| MF | GO:0016620 | oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor | IEP | Predicted GO |
| MF | GO:0016741 | transferase activity, transferring one-carbon groups | IEP | Predicted GO |
| MF | GO:0016846 | carbon-sulfur lyase activity | IEP | Predicted GO |
| MF | GO:0016903 | oxidoreductase activity, acting on the aldehyde or oxo group of donors | IEP | Predicted GO |
| BP | GO:0018130 | heterocycle biosynthetic process | IEP | Predicted GO |
| MF | GO:0019200 | carbohydrate kinase activity | IEP | Predicted GO |
| MF | GO:0019207 | kinase regulator activity | IEP | Predicted GO |
| MF | GO:0019210 | kinase inhibitor activity | IEP | Predicted GO |
| BP | GO:0019438 | aromatic compound biosynthetic process | IEP | Predicted GO |
| MF | GO:0019887 | protein kinase regulator activity | IEP | Predicted GO |
| BP | GO:0022402 | cell cycle process | IEP | Predicted GO |
| MF | GO:0030291 | protein serine/threonine kinase inhibitor activity | IEP | Predicted GO |
| BP | GO:0032774 | RNA biosynthetic process | IEP | Predicted GO |
| BP | GO:0033013 | tetrapyrrole metabolic process | IEP | Predicted GO |
| BP | GO:0033014 | tetrapyrrole biosynthetic process | IEP | Predicted GO |
| BP | GO:0034654 | nucleobase-containing compound biosynthetic process | IEP | Predicted GO |
| BP | GO:0042866 | pyruvate biosynthetic process | IEP | Predicted GO |
| BP | GO:0044249 | cellular biosynthetic process | IEP | Predicted GO |
| BP | GO:0044271 | cellular nitrogen compound biosynthetic process | IEP | Predicted GO |
| BP | GO:0045786 | negative regulation of cell cycle | IEP | Predicted GO |
| BP | GO:0046031 | ADP metabolic process | IEP | Predicted GO |
| BP | GO:0046351 | disaccharide biosynthetic process | IEP | Predicted GO |
| BP | GO:0046483 | heterocycle metabolic process | IEP | Predicted GO |
| BP | GO:0046939 | nucleotide phosphorylation | IEP | Predicted GO |
| BP | GO:0051726 | regulation of cell cycle | IEP | Predicted GO |
| MF | GO:0140110 | transcription regulator activity | IEP | Predicted GO |
| BP | GO:1901360 | organic cyclic compound metabolic process | IEP | Predicted GO |
| BP | GO:1901362 | organic cyclic compound biosynthetic process | IEP | Predicted GO |
| BP | GO:1901576 | organic substance biosynthetic process | IEP | Predicted GO |
| InterPro domains | Description | Start | Stop |
|---|---|---|---|
| IPR022796 | Chloroa_b-bind | 66 | 232 |
| No external refs found! |