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  5. Bradi1g14430

Bradi1g14430


Description : RING/U-box superfamily protein


Gene families : OG_42_0000347 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000347_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Brachypodium release: Bradi1g14430
Cluster HCCA clusters: Cluster_192

Target Alias Description ECC score Gene Family Method Actions
A4A49_29231 No alias putative e3 ubiquitin-protein ligase ari8 0.03 Orthogroups_2024-Update
At1g05880 No alias Probable E3 ubiquitin-protein ligase ARI12... 0.03 Orthogroups_2024-Update
Bradi1g14425 No alias RING/U-box superfamily protein 0.03 Orthogroups_2024-Update
Brara.B03309.1 No alias RBR-Ariadne-class E3 ubiquitin ligase 0.02 Orthogroups_2024-Update
Brara.H02982.1 No alias RBR-Ariadne-class E3 ubiquitin ligase 0.02 Orthogroups_2024-Update
HORVU0Hr1G015890.9 No alias Unknown function 0.02 Orthogroups_2024-Update
LOC_Os04g41470 No alias expressed protein 0.02 Orthogroups_2024-Update
Potri.002G131200 No alias IBR domain-containing protein 0.02 Orthogroups_2024-Update
Seita.9G165200.1 No alias RBR-Ariadne-class E3 ubiquitin ligase 0.05 Orthogroups_2024-Update
Sobic.005G210000.1 No alias RBR-Ariadne-class E3 ubiquitin ligase & component... 0.03 Orthogroups_2024-Update
Sopen11g004370 No alias IBR domain 0.03 Orthogroups_2024-Update
evm.model.contig_4402.6 No alias no hits & (original description: no original description) 0.01 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0001871 pattern binding IEP Predicted GO
MF GO:0004842 ubiquitin-protein transferase activity IEP Predicted GO
MF GO:0019787 ubiquitin-like protein transferase activity IEP Predicted GO
MF GO:0030247 polysaccharide binding IEP Predicted GO
MF GO:0061630 ubiquitin protein ligase activity IEP Predicted GO
MF GO:0061659 ubiquitin-like protein ligase activity IEP Predicted GO
MF GO:0140096 catalytic activity, acting on a protein IEP Predicted GO
InterPro domains Description Start Stop
IPR002867 IBR_dom 197 260
No external refs found!