- Species
- Tools
- Expression Profiles
- Compare profiles
- Create heatmap
- Export expression levels
- Expression Specificity
- Compare specificities
- Find specific profiles
- Co-expression Networks
- Create custom network
- Find enriched clusters
- Search
Description : copper/zinc superoxide dismutase 1
Gene families : OG_42_0001339 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0001339_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | Brachypodium release: Bradi1g18340 | |
| Cluster | HCCA clusters: Cluster_23 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| 442405 | No alias | copper/zinc superoxide dismutase 2 | 0.03 | Orthogroups_2024-Update | |
| Kfl00631_0030 | kfl00631_0030_v1.1 | (p10792|sodcp_pethy : 239.0) Superoxide dismutase... | 0.02 | Orthogroups_2024-Update | |
| Potri.019G035800 | No alias | copper/zinc superoxide dismutase 3 | 0.02 | Orthogroups_2024-Update | |
| Sobic.001G371900.1 | No alias | copper/zinc superoxide dismutase *(CSD) & EC_1.15... | 0.02 | Orthogroups_2024-Update | |
| Sobic.002G407900.1 | No alias | copper/zinc superoxide dismutase *(CSD) & EC_1.15... | 0.02 | Orthogroups_2024-Update | |
| evm.model.tig00000342.1 | No alias | (p23346|sodc5_maize : 164.0) Superoxide dismutase... | 0.02 | Orthogroups_2024-Update |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| BP | GO:0006801 | superoxide metabolic process | IEA | InterProScan predictions |
| MF | GO:0046872 | metal ion binding | IEA | InterProScan predictions |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0001882 | nucleoside binding | IEP | Predicted GO |
| MF | GO:0001883 | purine nucleoside binding | IEP | Predicted GO |
| MF | GO:0004298 | threonine-type endopeptidase activity | IEP | Predicted GO |
| MF | GO:0004619 | phosphoglycerate mutase activity | IEP | Predicted GO |
| MF | GO:0005525 | GTP binding | IEP | Predicted GO |
| CC | GO:0005839 | proteasome core complex | IEP | Predicted GO |
| MF | GO:0008121 | ubiquinol-cytochrome-c reductase activity | IEP | Predicted GO |
| MF | GO:0016620 | oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor | IEP | Predicted GO |
| MF | GO:0016679 | oxidoreductase activity, acting on diphenols and related substances as donors | IEP | Predicted GO |
| MF | GO:0016681 | oxidoreductase activity, acting on diphenols and related substances as donors, cytochrome as acceptor | IEP | Predicted GO |
| MF | GO:0016866 | intramolecular transferase activity | IEP | Predicted GO |
| MF | GO:0016868 | intramolecular transferase activity, phosphotransferases | IEP | Predicted GO |
| MF | GO:0016903 | oxidoreductase activity, acting on the aldehyde or oxo group of donors | IEP | Predicted GO |
| MF | GO:0019001 | guanyl nucleotide binding | IEP | Predicted GO |
| MF | GO:0032549 | ribonucleoside binding | IEP | Predicted GO |
| MF | GO:0032550 | purine ribonucleoside binding | IEP | Predicted GO |
| MF | GO:0032561 | guanyl ribonucleotide binding | IEP | Predicted GO |
| MF | GO:0046537 | 2,3-bisphosphoglycerate-independent phosphoglycerate mutase activity | IEP | Predicted GO |
| MF | GO:0051537 | 2 iron, 2 sulfur cluster binding | IEP | Predicted GO |
| BP | GO:0051603 | proteolysis involved in cellular protein catabolic process | IEP | Predicted GO |
| MF | GO:0061630 | ubiquitin protein ligase activity | IEP | Predicted GO |
| MF | GO:0061659 | ubiquitin-like protein ligase activity | IEP | Predicted GO |
| MF | GO:0070003 | threonine-type peptidase activity | IEP | Predicted GO |
| InterPro domains | Description | Start | Stop |
|---|---|---|---|
| IPR001424 | SOD_Cu_Zn_dom | 11 | 148 |
| No external refs found! |