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  5. Bradi1g19690

Bradi1g19690


Description : Tetratricopeptide repeat (TPR)-like superfamily protein


Gene families : OG_42_0004471 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0004471_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Brachypodium release: Bradi1g19690
Cluster HCCA clusters: Cluster_1

Target Alias Description ECC score Gene Family Method Actions
Cre12.g513500 No alias Tetratricopeptide repeat (TPR)-like superfamily protein 0.03 Orthogroups_2024-Update
Glyma.13G245700 No alias Tetratricopeptide repeat (TPR)-like superfamily protein 0.04 Orthogroups_2024-Update
HORVU2Hr1G025180.1 No alias component *(SYF1/MAC9) of MAC spliceosome-associated complex 0.02 Orthogroups_2024-Update
PSME_00021526-RA No alias (at5g28740 : 1342.0) Tetratricopeptide repeat (TPR)-like... 0.03 Orthogroups_2024-Update
Seita.2G411500.1 No alias component *(SYF1/MAC9) of MAC spliceosome-associated complex 0.03 Orthogroups_2024-Update
Sobic.002G396000.1 No alias component *(SYF1/MAC9) of MAC spliceosome-associated complex 0.03 Orthogroups_2024-Update
Sopen01g034000 No alias hypothetical protein 0.02 Orthogroups_2024-Update
evm.model.tig00001206.15 No alias (at5g28740 : 754.0) Tetratricopeptide repeat (TPR)-like... 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003968 RNA-directed 5'-3' RNA polymerase activity IEP Predicted GO
MF GO:0005515 protein binding IEP Predicted GO
MF GO:0005516 calmodulin binding IEP Predicted GO
CC GO:0005643 nuclear pore IEP Predicted GO
BP GO:0006913 nucleocytoplasmic transport IEP Predicted GO
MF GO:0008289 lipid binding IEP Predicted GO
MF GO:0008641 ubiquitin-like modifier activating enzyme activity IEP Predicted GO
BP GO:0016579 protein deubiquitination IEP Predicted GO
MF GO:0016779 nucleotidyltransferase activity IEP Predicted GO
MF GO:0016877 ligase activity, forming carbon-sulfur bonds IEP Predicted GO
MF GO:0017056 structural constituent of nuclear pore IEP Predicted GO
MF GO:0019783 ubiquitin-like protein-specific protease activity IEP Predicted GO
MF GO:0034062 5'-3' RNA polymerase activity IEP Predicted GO
MF GO:0035091 phosphatidylinositol binding IEP Predicted GO
MF GO:0036459 thiol-dependent ubiquitinyl hydrolase activity IEP Predicted GO
CC GO:0044428 nuclear part IEP Predicted GO
BP GO:0046907 intracellular transport IEP Predicted GO
BP GO:0051169 nuclear transport IEP Predicted GO
BP GO:0051641 cellular localization IEP Predicted GO
BP GO:0051649 establishment of localization in cell IEP Predicted GO
BP GO:0070646 protein modification by small protein removal IEP Predicted GO
BP GO:0070647 protein modification by small protein conjugation or removal IEP Predicted GO
MF GO:0097747 RNA polymerase activity IEP Predicted GO
MF GO:0101005 ubiquitinyl hydrolase activity IEP Predicted GO

No InterPro domains available for this sequence

No external refs found!