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  5. Bradi1g26570

Bradi1g26570


Description : TARGET OF MONOPTEROS 6


Gene families : OG_42_0000027 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000027_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Brachypodium release: Bradi1g26570
Cluster HCCA clusters: Cluster_131

Target Alias Description ECC score Gene Family Method Actions
A4A49_04752 No alias dof zinc finger protein dof3.5 0.02 Orthogroups_2024-Update
A4A49_12086 No alias cyclic dof factor 2 0.03 Orthogroups_2024-Update
At5g65590 No alias SCAP1 [Source:UniProtKB/TrEMBL;Acc:A0A178UIB2] 0.02 Orthogroups_2024-Update
Bradi3g56380 No alias OBF binding protein 4 0.02 Orthogroups_2024-Update
Bradi4g04260 No alias OBF-binding protein 3 0.04 Orthogroups_2024-Update
Brara.C01888.1 No alias transcription factor *(DOF) 0.03 Orthogroups_2024-Update
GRMZM2G042218 No alias Dof-type zinc finger DNA-binding family protein 0.04 Orthogroups_2024-Update
GRMZM2G123900 No alias Dof-type zinc finger DNA-binding family protein 0.03 Orthogroups_2024-Update
Glyma.01G049400 No alias cycling DOF factor 3 0.04 Orthogroups_2024-Update
Glyma.02G062700 No alias OBF binding protein 1 0.04 Orthogroups_2024-Update
Glyma.07G012100 No alias DOF zinc finger protein 1 0.03 Orthogroups_2024-Update
Glyma.09G201000 No alias Dof-type zinc finger DNA-binding family protein 0.03 Orthogroups_2024-Update
Glyma.12G072400 No alias Dof-type zinc finger DNA-binding family protein 0.02 Orthogroups_2024-Update
Glyma.13G335200 No alias OBF-binding protein 3 0.04 Orthogroups_2024-Update
HORVU2Hr1G119110.4 No alias transcription factor *(DOF) 0.03 Orthogroups_2024-Update
PSME_00053408-RA No alias (at5g39660 : 183.0) Dof-type zinc finger... 0.03 Orthogroups_2024-Update
Seita.7G202300.1 No alias transcription factor *(DOF) 0.03 Orthogroups_2024-Update
Seita.9G259300.1 No alias transcription factor *(DOF) 0.04 Orthogroups_2024-Update
Seita.9G452000.1 No alias transcription factor *(DOF) 0.03 Orthogroups_2024-Update
Sobic.001G078700.1 No alias transcription factor *(DOF) 0.03 Orthogroups_2024-Update
Solyc06g062520 No alias Dof zinc finger protein (AHRD V3.3 *** W9QMS6_9ROSA) 0.03 Orthogroups_2024-Update
Solyc06g071480 No alias Dof zinc finger protein (AHRD V3.3 *** A0A0B6VJP1_TOBAC) 0.03 Orthogroups_2024-Update
Solyc11g072500 No alias Dof domain, zinc finger family protein (AHRD V3.3 ***... 0.03 Orthogroups_2024-Update
Sopen08g004350 No alias Dof domain, zinc finger 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0003677 DNA binding IEA InterProScan predictions
BP GO:0006355 regulation of transcription, DNA-templated IEA InterProScan predictions
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Type GO Term Name Evidence Source
CC GO:0000786 nucleosome IEP Predicted GO
MF GO:0003735 structural constituent of ribosome IEP Predicted GO
MF GO:0005198 structural molecule activity IEP Predicted GO
MF GO:0005543 phospholipid binding IEP Predicted GO
CC GO:0005787 signal peptidase complex IEP Predicted GO
CC GO:0005840 ribosome IEP Predicted GO
BP GO:0006412 translation IEP Predicted GO
BP GO:0006465 signal peptide processing IEP Predicted GO
BP GO:0006518 peptide metabolic process IEP Predicted GO
MF GO:0008289 lipid binding IEP Predicted GO
BP GO:0009059 macromolecule biosynthetic process IEP Predicted GO
MF GO:0015035 protein disulfide oxidoreductase activity IEP Predicted GO
MF GO:0015036 disulfide oxidoreductase activity IEP Predicted GO
BP GO:0016485 protein processing IEP Predicted GO
MF GO:0016667 oxidoreductase activity, acting on a sulfur group of donors IEP Predicted GO
CC GO:0032991 protein-containing complex IEP Predicted GO
CC GO:0032993 protein-DNA complex IEP Predicted GO
BP GO:0034641 cellular nitrogen compound metabolic process IEP Predicted GO
BP GO:0034645 cellular macromolecule biosynthetic process IEP Predicted GO
BP GO:0043043 peptide biosynthetic process IEP Predicted GO
CC GO:0043228 non-membrane-bounded organelle IEP Predicted GO
CC GO:0043232 intracellular non-membrane-bounded organelle IEP Predicted GO
BP GO:0043603 cellular amide metabolic process IEP Predicted GO
BP GO:0043604 amide biosynthetic process IEP Predicted GO
CC GO:0044422 organelle part IEP Predicted GO
CC GO:0044424 intracellular part IEP Predicted GO
CC GO:0044432 endoplasmic reticulum part IEP Predicted GO
CC GO:0044444 cytoplasmic part IEP Predicted GO
CC GO:0044446 intracellular organelle part IEP Predicted GO
CC GO:0044464 cell part IEP Predicted GO
CC GO:0044815 DNA packaging complex IEP Predicted GO
BP GO:0051604 protein maturation IEP Predicted GO
BP GO:1901566 organonitrogen compound biosynthetic process IEP Predicted GO
CC GO:1905368 peptidase complex IEP Predicted GO
CC GO:1990904 ribonucleoprotein complex IEP Predicted GO
InterPro domains Description Start Stop
IPR003851 Znf_Dof 45 100
No external refs found!